Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_12340 Physcomitrium patens HOM05D002465 ORTHO05D005308 0.0e+00 1323.9 641 100.0
Mapoly0051s0060 Marchantia polymorpha HOM05D002465 ORTHO05D005308 9.1e-167 591.3 642 48.1
AagrBONN_evm.TU.Sc2ySwM_228.3313 Anthoceros agrestis HOM05D002465 ORTHO05D005308 2.1e-147 526.9 626 48.2
Aqoxy5G04085 Aquilegia oxysepala HOM05D002465 ORTHO05D005308 2.9e-136 490.0 555 47.2
Sabra17G0123700 Salix brachista HOM05D002465 ORTHO05D005308 2.0e-134 483.8 566 46.5
Thecc.03G185500 Theobroma cacao HOM05D002465 ORTHO05D005308 7.8e-134 481.9 655 42.3
EL10Ac3g05400 Beta vulgaris HOM05D002465 ORTHO05D005308 2.3e-133 480.3 651 42.7
Sabra17G0123300 Salix brachista HOM05D002465 ORTHO05D005308 5.0e-133 479.2 560 46.4
ECA232G4104 Erigeron canadensis HOM05D002465 ORTHO05D005308 8.6e-133 478.4 581 44.8
HanXRQChr15g0494161 Helianthus annuus HOM05D002465 ORTHO05D005308 1.1e-132 478.0 630 43.2
Manes.06G153300 Manihot esculenta HOM05D002465 ORTHO05D005308 1.9e-132 477.2 657 42.2
Potri.017G148000 Populus trichocarpa HOM05D002465 ORTHO05D005308 3.3e-132 476.5 555 46.1
Lsat_1_v5_gn_9_56800 Lactuca sativa HOM05D002465 ORTHO05D005308 2.1e-131 473.8 620 42.7
TAR374G1583 Trochodendron aralioides HOM05D002465 ORTHO05D005308 4.7e-131 472.6 563 46.4
Eucgr.A02722 Eucalyptus grandis HOM05D002465 ORTHO05D005308 8.0e-131 471.9 648 42.9
Sc13g0009230 Simmondsia chinensis HOM05D002465 ORTHO05D005308 1.1e-130 471.5 638 44.0
QL09p012529 Quercus lobata HOM05D002465 ORTHO05D005308 3.1e-130 469.9 661 41.9
Gorai.008G274000 Gossypium raimondii HOM05D002465 ORTHO05D005308 1.5e-129 467.6 647 42.3
GSVIVG01028829001 Vitis vinifera HOM05D002465 ORTHO05D005308 1.5e-129 467.6 647 41.7
Dinv35264 Davidia involucrata HOM05D002465 ORTHO05D005308 6.4e-128 462.2 560 45.5
Ciclev10006841m.g Citrus clementina HOM05D002465 ORTHO05D005308 1.1e-127 461.5 505 47.3
Cc02_g02290 Coffea canephora HOM05D002465 ORTHO05D005308 1.1e-127 461.5 658 40.9
Nn1g01670 Nelumbo nucifera HOM05D002465 ORTHO05D005308 1.1e-127 461.5 439 53.1
ATR0661G279 Amborella trichopoda HOM05D002465 ORTHO05D005308 1.4e-127 461.1 583 43.6
Haze_00055 Corylus avellana HOM05D002465 ORTHO05D005308 7.0e-127 458.8 656 42.7
Ah.07g206490 Amaranthus hybridus HOM05D002465 ORTHO05D005308 9.2e-127 458.4 568 45.1
Oeu036031.1 Olea europaea HOM05D002465 ORTHO05D005308 9.2e-127 458.4 636 41.7
PSO170G2577 Papaver somniferum HOM05D002465 ORTHO05D005308 9.2e-127 458.4 647 41.6
Actinidia34161 Actinidia chinensis HOM05D002465 ORTHO05D005308 1.6e-126 457.6 655 42.3
Lj2g0016146 Lotus japonicus HOM05D002465 ORTHO05D005308 2.1e-126 457.2 556 45.1
Nitab4.5_0007593g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 2.1e-126 457.2 546 46.3
Migut.F00281 Erythranthe guttata HOM05D002465 ORTHO05D005308 3.5e-126 456.4 568 43.7
MD01G1209800 Malus domestica HOM05D002465 ORTHO05D005308 3.5e-126 456.4 641 41.3
AUR62021107 Chenopodium quinoa HOM05D002465 ORTHO05D005308 4.6e-126 456.1 491 47.3
MBI04_g26956_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 7.8e-126 455.3 504 47.6
Gohir.D12G255900 Gossypium hirsutum HOM05D002465 ORTHO05D005308 1.0e-125 454.9 638 41.5
Sopen12g022610 Solanum pennellii HOM05D002465 ORTHO05D005308 1.7e-125 454.1 554 45.7
THA.LOC104811947 Tarenaya hassleriana HOM05D002465 ORTHO05D005308 2.3e-125 453.8 490 47.6
Medtr6g052330 Medicago truncatula HOM05D002465 ORTHO05D005308 3.9e-125 453.0 657 41.4
Glyma.09G129600 Glycine max HOM05D002465 ORTHO05D005308 5.1e-125 452.6 653 40.3
CAN.G290.13 Capsicum annuum HOM05D002465 ORTHO05D005308 1.1e-124 451.4 650 42.0
Cfa016295 Carpinus fangiana HOM05D002465 ORTHO05D005308 4.3e-124 449.5 561 44.2
Prupe.2G301900 Prunus persica HOM05D002465 ORTHO05D005308 4.3e-124 449.5 639 41.8
Lalb_Chr19g0130571 Lupinus albus HOM05D002465 ORTHO05D005308 9.5e-124 448.4 640 41.9
SalBow4G2218 Salvia bowleyana HOM05D002465 ORTHO05D005308 9.5e-124 448.4 503 47.1
COL.COLO4_30301 Corchorus olitorius HOM05D002465 ORTHO05D005308 3.6e-123 446.4 621 42.2
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 6.2e-123 445.7 499 47.3
Os07g0467900 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D005308 1.4e-122 444.5 555 43.6
RcHm_v2.0_Chr1g0378531 Rosa chinensis HOM05D002465 ORTHO05D005308 1.8e-122 444.1 597 43.9
AUR62031432 Chenopodium quinoa HOM05D002465 ORTHO05D005308 2.3e-122 443.7 491 46.8
Cpa.g.sc107.121 Carica papaya HOM05D002465 ORTHO05D005308 3.1e-122 443.4 652 40.8
PGR042G3288 Punica granatum HOM05D002465 ORTHO05D005308 4.0e-122 443.0 608 41.9
DCAR_008895 Daucus carota HOM05D002465 ORTHO05D005308 6.8e-122 442.2 558 44.4
TPR.G9187 Trifolium pratense HOM05D002465 ORTHO05D005308 1.2e-121 441.4 616 40.4
ClCG05G008450 Citrullus lanatus HOM05D002465 ORTHO05D005308 9.9e-121 438.3 668 38.2
Hund04793 Selenicereus undatus HOM05D002465 ORTHO05D005308 1.3e-120 438.0 486 46.7
FvH4_7g30390 Fragaria vesca HOM05D002465 ORTHO05D005308 1.7e-120 437.6 528 46.0
FAN10G1194 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.7e-120 436.4 523 46.1
Rhsim03G0191700 Rhododendron simsii HOM05D002465 ORTHO05D005308 3.7e-120 436.4 469 48.8
FAN06G0430 Fragaria x ananassa HOM05D002465 ORTHO05D005308 8.3e-120 435.3 528 46.0
FAN06G3650 Fragaria x ananassa HOM05D002465 ORTHO05D005308 8.3e-120 435.3 528 46.0
SGA_v2.0_scaffold60G21117 Striga asiatica HOM05D002465 ORTHO05D005308 8.3e-120 435.3 634 40.7
CsaV3_3G017530 Cucumis sativus L. HOM05D002465 ORTHO05D005308 1.9e-119 434.1 647 40.8
TWI23G1289 Tripterygium wilfordii HOM05D002465 ORTHO05D005308 1.9e-119 434.1 643 40.7
Carub.0008s1296 Capsella rubella HOM05D002465 ORTHO05D005308 2.4e-119 433.7 557 42.9
FAN10G1435 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.2e-119 433.3 528 45.8
Nitab4.5_0008234g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 3.2e-119 433.3 585 42.7
HPP92_015081 Vanilla planifolia HOM05D002465 ORTHO05D005308 5.4e-119 432.6 428 49.8
Thhalv10012991m.g Eutrema salsugineum HOM05D002465 ORTHO05D005308 7.1e-119 432.2 558 42.5
BcaC03g14499 Brassica carinata HOM05D002465 ORTHO05D005308 2.1e-118 430.6 633 40.4
unitig_52.g17726 Utricularia gibba HOM05D002465 ORTHO05D005308 4.6e-118 429.5 487 46.8
FAN03G3136 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.0e-118 429.1 439 50.6
Duzib205G0901 Durio zibethinus HOM05D002465 ORTHO05D005308 7.8e-118 428.7 505 45.1
BcaB05g21981 Brassica carinata HOM05D002465 ORTHO05D005308 1.7e-117 427.6 633 39.7
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 1.7e-117 427.6 630 41.0
Sed0022656 Sechium edule HOM05D002465 ORTHO05D005308 1.7e-117 427.6 555 43.2
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 3.0e-117 426.8 537 43.8
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 6.6e-117 425.6 603 41.5
Atru.BG.183.p Acer truncatum HOM05D002465 ORTHO05D005308 2.5e-116 423.7 407 51.6
AT5G52800 Arabidopsis thaliana HOM05D002465 ORTHO05D005308 2.5e-116 423.7 582 41.6
Psat0s1684g0080 Pisum sativum HOM05D002465 ORTHO05D005308 2.5e-116 423.7 503 44.1
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 4.3e-116 422.9 630 40.3
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.2e-115 421.4 630 40.5
CiPaw.05G261600 Carya illinoinensis HOM05D002465 ORTHO05D005308 1.2e-115 421.4 511 45.8
AL8G27230 Arabidopsis lyrata HOM05D002465 ORTHO05D005308 2.8e-115 420.2 485 45.8
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 1.3e-112 411.4 461 46.4
Gohir.A12G253600 Gossypium hirsutum HOM05D002465 ORTHO05D005308 2.2e-112 410.6 647 38.9
DCAR_018565 Daucus carota HOM05D002465 ORTHO05D005308 9.2e-111 405.2 476 45.4
Aa31LG3G9040 Aethionema arabicum HOM05D002465 ORTHO05D005308 4.6e-110 402.9 587 40.9
Phvul.004G106200 Phaseolus vulgaris HOM05D002465 ORTHO05D005308 1.5e-108 397.9 519 43.2
vmacro06621 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 1.9e-108 397.5 435 49.2
SMO103G0001 Selaginella moellendorffii HOM05D002465 ORTHO05D005308 1.1e-103 381.7 390 49.5
arahy.Tifrunner.gnm1.ann1.77GMEU Arachis hypogaea HOM05D002465 ORTHO05D005308 5.4e-103 379.4 586 39.4
Peaxi162Scf00023g00823 Petunia axillaris HOM05D002465 ORTHO05D005308 9.3e-103 378.6 420 47.1
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 2.7e-102 377.1 418 47.4
SHI09096 Sapria himalayana HOM05D002465 ORTHO05D005308 2.7e-102 377.1 464 44.0
CBR_g36403 Chara braunii HOM05D002465 ORTHO05D005308 8.7e-101 372.1 444 45.9
Hma1.2p1_0274F.1_g110040 Hydrangea macrophylla HOM05D002465 ORTHO05D005308 4.3e-100 369.8 572 39.7
FAN01G1269 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.6e-99 366.7 546 40.7
MELO3C006956.2 Cucumis melo HOM05D002465 ORTHO05D005308 4.8e-99 366.3 653 36.6
arahy.Tifrunner.gnm1.ann1.TJ5MNL Arachis hypogaea HOM05D002465 ORTHO05D005308 9.6e-92 342.0 459 42.7
CSS0029570 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 4.2e-79 300.1 364 46.2
RcHm_v2.0_Chr3g0497461 Rosa chinensis HOM05D002465 ORTHO05D005308 6.7e-77 292.7 353 45.6
MSTRG.8702 Avicennia marina HOM05D002465 ORTHO05D005308 1.5e-76 291.6 261 55.6
Sabra17G0121400 Salix brachista HOM05D002465 ORTHO05D005308 2.2e-72 277.7 282 50.0
MCO12G313 Micromonas commoda HOM05D002465 ORTHO05D005308 1.1e-71 275.4 421 39.7
SEGI_25618 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 3.6e-70 270.4 223 56.5
Ca_26606_v3 Cicer arietinum L. HOM05D002465 ORTHO05D005308 1.4e-69 268.5 634 31.1
CANSAT21G2443 Cannabis sativa HOM05D002465 ORTHO05D005308 3.1e-58 230.7 348 39.4
VMungo0464G1215 Vigna mungo HOM05D002465 ORTHO05D005308 1.6e-54 218.4 297 43.8
DCAR_030059 Daucus carota HOM05D002465 ORTHO05D005308 6.5e-48 196.4 186 50.5
DCAR_005086 Daucus carota HOM05D002465 ORTHO05D005308 1.1e-47 195.7 185 50.8
DCAR_029376 Daucus carota HOM05D002465 ORTHO05D005308 9.7e-44 182.6 156 53.2
FAN05G2518 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.0e-42 176.4 156 54.5
FAN09G4610 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.0e-42 176.4 156 54.5
FAN10G2552 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.0e-42 176.4 156 54.5
FAN25G3664 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.0e-42 176.4 156 54.5
MSTRG.8701 Avicennia marina HOM05D002465 ORTHO05D005308 1.0e-40 172.6 276 37.0
PRCOL_00005773 Prasinoderma coloniale HOM05D002465 ORTHO05D005308 6.5e-40 169.9 446 29.8
Zm00001eb320240 Zea mays HOM05D002465 ORTHO05D005308 2.3e-37 161.4 271 36.2
SEGI_28877 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 5.2e-37 160.2 134 59.0
Cre17.g705150 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D005308 1.3e-35 155.6 360 29.2
MD01G1209700 Malus domestica HOM05D002465 ORTHO05D005308 3.5e-33 147.5 229 38.4
HPP92_028543 Vanilla planifolia HOM05D002465 ORTHO05D005308 5.0e-32 143.7 106 57.5
CSS0047166 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 4.2e-31 140.6 225 38.7
Oeu058603.1 Olea europaea HOM05D002465 ORTHO05D005308 6.3e-27 126.7 203 39.9
Actinidia08585 Actinidia chinensis HOM05D002465 ORTHO05D005308 5.9e-25 120.2 98 54.1
CBR_g81559 Chara braunii HOM05D002465 ORTHO05D005308 3.3e-23 114.4 234 33.8
CBR_g19350 Chara braunii HOM05D000019 ORTHO05D000048 3.5e-17 94.4 158 36.7
DCAR_030105 Daucus carota HOM05D002465 ORTHO05D005308 4.6e-17 94.0 215 31.2
RcHm_v2.0_Chr1g0361031 Rosa chinensis HOM05D002465 ORTHO05D005308 5.6e-15 87.0 72 51.4
FAN03G1432 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.6e-14 85.5 156 34.6
FAN09G0727 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.6e-14 85.5 156 34.6
FAN09G3189 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.6e-14 85.5 156 34.6
FAN14G0324 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.6e-14 85.5 156 34.6
FAN16G1547 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.6e-14 85.5 156 34.6
FAN21G0521 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.6e-14 85.5 156 34.6
FAN22G1212 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.6e-14 85.5 156 34.6
FAN25G1827 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.6e-14 85.5 156 34.6
FAN25G2717 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.6e-14 85.5 156 34.6
FAN27G0148 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.6e-14 85.5 156 34.6
FAN27G0541 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.6e-14 85.5 156 34.6
FAN27G0848 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.6e-14 85.5 156 34.6
FAN28G0992 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.6e-14 85.5 156 34.6
Psat0s1616g0040 Pisum sativum HOM05D002465 ORTHO05D005308 2.8e-14 84.7 94 47.9
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 3.4e-12 77.8 244 29.9
vmacro06620 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 7.5e-12 76.6 168 31.5
Nitab4.5_0007593g0030 Nicotiana tabacum HOM05D002465 ORTHO05D005308 4.9e-11 73.9 45 66.7
Cre12.g553253 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D145954 1.3e-08 65.9 84 35.7
PSO063G0346 Papaver somniferum HOM05D002465 ORTHO05D005308 8.6e-08 63.2 32 71.9
Sabra18G0007300 Salix brachista HOM05D002718 ORTHO05D003269 1.9e-07 62.0 92 39.1
CBR_g47978 Chara braunii HOM05D002465 ORTHO05D005308 4.7e-06 57.4 100 32.0


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