Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 5.6e-163 578.2 449 100.0
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 5.6e-163 578.2 449 100.0
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 4.5e-96 355.9 454 75.6
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.8e-84 317.4 454 68.7
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 2.2e-74 283.9 411 68.9
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 2.2e-50 204.1 166 63.9
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 8.3e-50 202.2 166 63.9
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 2.7e-48 197.2 167 63.5
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 3.5e-48 196.8 166 62.0
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 3.5e-48 196.8 167 62.9
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 4.6e-48 196.4 162 61.7
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 6.0e-48 196.1 164 62.8
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 7.8e-48 195.7 167 62.3
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 2.3e-47 194.1 166 63.3
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 3.0e-47 193.7 166 62.7
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 3.0e-47 193.7 166 62.0
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 3.9e-47 193.4 167 60.5
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 6.6e-47 192.6 167 61.1
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 6.6e-47 192.6 167 61.1
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 1.1e-46 191.8 166 62.0
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 1.5e-46 191.4 166 62.0
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 1.9e-46 191.0 165 64.2
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 2.5e-46 190.7 166 61.4
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 2.5e-46 190.7 166 62.7
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 2.5e-46 190.7 167 62.3
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 2.5e-46 190.7 218 55.0
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 3.3e-46 190.3 166 61.4
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 4.3e-46 189.9 163 62.6
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 7.3e-46 189.1 163 61.3
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 7.3e-46 189.1 410 48.8
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 9.5e-46 188.7 166 60.8
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 1.2e-45 188.3 216 56.0
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 1.2e-45 188.3 216 56.0
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 1.2e-45 188.3 167 61.7
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 2.1e-45 187.6 166 61.4
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 2.1e-45 187.6 166 61.4
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 2.1e-45 187.6 165 60.0
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 2.1e-45 187.6 166 60.2
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 2.1e-45 187.6 166 60.8
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 2.8e-45 187.2 164 61.6
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 3.6e-45 186.8 161 62.7
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 3.6e-45 186.8 164 61.0
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 3.6e-45 186.8 165 61.2
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 3.6e-45 186.8 184 60.3
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 3.6e-45 186.8 166 60.8
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 4.7e-45 186.4 163 62.0
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 4.7e-45 186.4 166 60.8
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 4.7e-45 186.4 166 60.2
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 6.2e-45 186.0 170 62.9
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 6.2e-45 186.0 157 62.4
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 8.1e-45 185.7 160 61.9
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 8.1e-45 185.7 162 61.7
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 8.1e-45 185.7 162 58.6
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 1.1e-44 185.3 162 61.7
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 1.1e-44 185.3 238 48.7
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.1e-44 185.3 165 60.6
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 1.1e-44 185.3 164 61.0
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 1.1e-44 185.3 166 59.0
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.1e-44 185.3 221 55.2
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 1.4e-44 184.9 165 60.6
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 1.4e-44 184.9 165 60.6
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 2.3e-44 184.1 218 56.0
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 2.3e-44 184.1 221 56.1
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 5.2e-44 183.0 415 48.4
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 8.9e-44 182.2 161 60.2
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 8.9e-44 182.2 161 60.2
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.2e-43 181.8 162 61.1
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.5e-43 181.4 167 59.3
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 2.0e-43 181.0 162 60.5
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 2.6e-43 180.6 161 60.9
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 2.6e-43 180.6 161 60.9
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 2.6e-43 180.6 163 60.7
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 3.4e-43 180.3 162 59.9
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 3.4e-43 180.3 170 61.2
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 5.8e-43 179.5 160 61.2
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 7.6e-43 179.1 161 60.2
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 1.3e-42 178.3 160 60.0
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.7e-42 177.9 156 60.9
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 1.7e-42 177.9 160 60.6
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.7e-42 177.9 156 60.9
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 2.9e-42 177.2 162 59.9
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 2.9e-42 177.2 215 54.4
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 2.9e-42 177.2 160 60.0
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 3.7e-42 176.8 156 60.9
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 3.7e-42 176.8 162 59.3
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 3.7e-42 176.8 161 61.5
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 4.9e-42 176.4 152 61.8
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 6.4e-42 176.0 160 59.4
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 1.4e-41 174.9 166 57.8
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 1.9e-41 174.5 417 49.2
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 1.9e-41 174.5 154 61.7
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.4e-41 174.1 218 51.8
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 2.4e-41 174.1 218 51.8
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 3.2e-41 173.7 166 57.8
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 3.2e-41 173.7 166 57.8
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 3.2e-41 173.7 166 57.8
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 4.1e-41 173.3 220 51.8
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 5.4e-41 172.9 154 61.0
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 5.4e-41 172.9 166 57.8
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 5.4e-41 172.9 163 57.7
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 7.1e-41 172.6 166 57.2
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 1.2e-40 171.8 402 46.5
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 3.5e-40 170.2 218 51.4
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 3.0e-39 167.2 148 60.8
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 5.6e-38 162.9 164 54.3
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 3.8e-34 150.2 154 54.5
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 6.4e-34 149.4 113 67.3
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 7.6e-27 125.9 165 45.5
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 1.7e-23 114.8 153 47.7
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 9.6e-22 109.0 160 43.1
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 9.6e-22 109.0 170 39.4
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 1.6e-21 108.2 169 39.1
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 1.8e-15 88.2 139 38.8
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 3.1e-12 77.4 63 60.3
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 4.0e-12 77.0 163 35.0
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 2.1e-08 64.7 121 37.2
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 1.3e-07 62.0 82 45.1
Lj3g0014785 Lotus japonicus HOM05D005498 ORTHO05D006719 3.3e-06 57.4 121 33.1
Medtr6g004180 Medicago truncatula HOM05D005498 ORTHO05D006719 5.7e-06 56.6 121 31.4
Haze_12543 Corylus avellana HOM05D005498 ORTHO05D006719 9.6e-06 55.8 121 32.2
Gohir.A10G154800 Gossypium hirsutum HOM05D005498 ORTHO05D006719 9.6e-06 55.8 122 30.3
Gohir.D10G111100 Gossypium hirsutum HOM05D005498 ORTHO05D006719 9.6e-06 55.8 122 30.3
Gorai.011G122500 Gossypium raimondii HOM05D005498 ORTHO05D006719 9.6e-06 55.8 122 30.3


User provided reference genes

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