Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_11050 Physcomitrium patens HOM05D000166 ORTHO05D050363 1.5e-81 306.6 210 100.0
Pp3c7_14840 Physcomitrium patens HOM05D000166 ORTHO05D050363 1.1e-28 131.0 197 57.4
HanXRQChr09g0247821 Helianthus annuus HOM05D000166 ORTHO05D000812 8.2e-08 61.6 74 43.2
SMO361G0541 Selaginella moellendorffii HOM05D000166 ORTHO05D000812 8.2e-08 61.6 70 42.9
CiPaw.16G077900 Carya illinoinensis HOM05D000166 ORTHO05D000812 1.4e-07 60.8 83 44.6
Glyma.09G018800 Glycine max HOM05D000166 ORTHO05D000812 1.8e-07 60.5 70 41.4
Glyma.15G124900 Glycine max HOM05D000166 ORTHO05D000812 1.8e-07 60.5 68 42.6
Glyma.10G069500 Glycine max HOM05D000166 ORTHO05D000812 3.1e-07 59.7 67 46.3
Cc02_g23860 Coffea canephora HOM05D000166 ORTHO05D000812 4.1e-07 59.3 68 45.6
Cc06_g22310 Coffea canephora HOM05D000166 ORTHO05D000812 4.1e-07 59.3 73 45.2
Glyma.13G152542 Glycine max HOM05D000166 ORTHO05D000812 4.1e-07 59.3 67 44.8
PSO384G0889 Papaver somniferum HOM05D000166 ORTHO05D000812 4.1e-07 59.3 67 49.3
Eucgr.A00882 Eucalyptus grandis HOM05D000166 ORTHO05D000812 5.3e-07 58.9 73 41.1
arahy.Tifrunner.gnm1.ann1.69MPHZ Arachis hypogaea HOM05D000166 ORTHO05D000812 1.2e-06 57.8 67 46.3
arahy.Tifrunner.gnm1.ann1.FTDV76 Arachis hypogaea HOM05D000166 ORTHO05D000812 1.2e-06 57.8 67 46.3
Manes.08G165600 Manihot esculenta HOM05D000166 ORTHO05D000812 1.2e-06 57.8 70 44.3
Sc03g0005560 Simmondsia chinensis HOM05D000166 ORTHO05D000812 1.5e-06 57.4 68 42.6
TPR.G11679 Trifolium pratense HOM05D000166 ORTHO05D000812 1.5e-06 57.4 67 43.3
Lalb_Chr18g0059301 Lupinus albus HOM05D000166 ORTHO05D000812 2.0e-06 57.0 67 46.3
BcaB07g31314 Brassica carinata HOM05D000166 ORTHO05D000812 2.6e-06 56.6 69 37.7
BcaC04g22387 Brassica carinata HOM05D000166 ORTHO05D000812 2.6e-06 56.6 69 37.7
A09p16370 Brassica napus HOM05D000166 ORTHO05D000812 2.6e-06 56.6 69 37.7
C09p19880 Brassica napus HOM05D000166 ORTHO05D000812 2.6e-06 56.6 69 37.7
BolC9t54893H Brassica oleracea HOM05D000166 ORTHO05D000812 2.6e-06 56.6 69 37.7
BolC9t54894H Brassica oleracea HOM05D000166 ORTHO05D000812 2.6e-06 56.6 69 37.7
BraA09t37277Z Brassica rapa HOM05D000166 ORTHO05D000812 2.6e-06 56.6 69 37.7
PSO017G0152 Papaver somniferum HOM05D000166 ORTHO05D000812 2.6e-06 56.6 69 42.0
MSTRG.345 Avicennia marina HOM05D000166 ORTHO05D000812 3.5e-06 56.2 74 41.9
A09p16390 Brassica napus HOM05D000166 ORTHO05D000812 3.5e-06 56.2 69 36.2
Lj6g0018715 Lotus japonicus HOM05D000166 ORTHO05D000812 3.5e-06 56.2 69 42.0
Lalb_Chr15g0089591 Lupinus albus HOM05D000166 ORTHO05D000812 3.5e-06 56.2 67 46.3
MBI03_g24429_MAGBIO Magnolia biondii HOM05D000166 ORTHO05D000812 3.5e-06 56.2 74 43.2
PSO339G2593 Papaver somniferum HOM05D000166 ORTHO05D000812 3.5e-06 56.2 67 47.8
TWI53G0865 Tripterygium wilfordii HOM05D000166 ORTHO05D000812 3.5e-06 56.2 73 42.5
FvH4_6g09001 Fragaria vesca HOM05D000166 ORTHO05D000812 4.5e-06 55.8 73 42.5
FAN14G3482 Fragaria x ananassa HOM05D000166 ORTHO05D000812 4.5e-06 55.8 73 42.5
Atru.chr6.63 Acer truncatum HOM05D000166 ORTHO05D000812 5.9e-06 55.5 71 39.4
Ca_00402_v3 Cicer arietinum L. HOM05D000166 ORTHO05D000812 7.7e-06 55.1 68 42.6
DCAR_029512 Daucus carota HOM05D000166 ORTHO05D000812 7.7e-06 55.1 75 44.0
FAN05G2974 Fragaria x ananassa HOM05D000166 ORTHO05D000812 7.7e-06 55.1 73 42.5


User provided reference genes

Program Settings