Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 1.0e-92 343.6 194 100.0
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.3e-20 104.0 120 59.2
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 4.3e-19 99.0 123 49.6
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 2.4e-17 93.2 188 45.2
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 2.0e-16 90.1 131 49.6
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 5.8e-16 88.6 118 49.2
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 2.2e-15 86.7 124 49.2
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 4.9e-15 85.5 92 57.6
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 4.9e-15 85.5 186 40.9
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.1e-14 84.3 78 69.2
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 1.9e-14 83.6 147 45.6
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 2.4e-14 83.2 94 58.5
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 4.2e-14 82.4 95 60.0
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 7.1e-14 81.6 78 70.5
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 7.1e-14 81.6 88 60.2
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 9.3e-14 81.3 94 55.3
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 1.2e-13 80.9 92 57.6
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 1.6e-13 80.5 94 60.6
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 1.6e-13 80.5 94 58.5
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 2.1e-13 80.1 88 59.1
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 2.1e-13 80.1 88 59.1
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 2.1e-13 80.1 88 59.1
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 2.1e-13 80.1 88 59.1
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 2.1e-13 80.1 88 59.1
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 2.1e-13 80.1 88 59.1
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 2.1e-13 80.1 78 69.2
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 2.1e-13 80.1 122 47.5
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 2.7e-13 79.7 101 57.4
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 2.7e-13 79.7 88 59.1
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 2.7e-13 79.7 88 59.1
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 2.7e-13 79.7 122 45.9
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 3.5e-13 79.3 88 54.5
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 4.6e-13 79.0 147 43.5
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 4.6e-13 79.0 82 62.2
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 4.6e-13 79.0 86 65.1
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 4.6e-13 79.0 140 47.1
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 6.0e-13 78.6 94 57.4
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 6.0e-13 78.6 88 58.0
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 7.8e-13 78.2 88 58.0
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 7.8e-13 78.2 78 65.4
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 7.8e-13 78.2 94 58.5
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 7.8e-13 78.2 94 56.4
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 7.8e-13 78.2 83 65.1
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 1.0e-12 77.8 94 57.4
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 1.0e-12 77.8 122 45.9
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 1.3e-12 77.4 82 62.2
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 1.7e-12 77.0 94 56.4
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 1.7e-12 77.0 104 52.9
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 1.7e-12 77.0 147 43.5
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 2.3e-12 76.6 94 56.4
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 2.3e-12 76.6 78 66.7
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 2.3e-12 76.6 88 53.4
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 2.3e-12 76.6 104 52.9
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 3.0e-12 76.3 82 63.4
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 3.0e-12 76.3 99 54.5
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 3.9e-12 75.9 73 68.5
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 5.1e-12 75.5 74 68.9
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 5.1e-12 75.5 81 56.8
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 8.7e-12 74.7 94 55.3
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 8.7e-12 74.7 88 60.2
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 8.7e-12 74.7 78 65.4
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 8.7e-12 74.7 78 64.1
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 8.7e-12 74.7 94 56.4
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 8.7e-12 74.7 116 50.0
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 8.7e-12 74.7 94 57.4
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 8.7e-12 74.7 94 57.4
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 1.1e-11 74.3 94 57.4
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 1.5e-11 73.9 94 53.2
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 1.5e-11 73.9 86 61.6
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.5e-11 73.9 94 55.3
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 1.9e-11 73.6 150 42.7
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.9e-11 73.6 150 42.7
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.9e-11 73.6 150 42.7
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 1.9e-11 73.6 191 35.1
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 2.5e-11 73.2 94 54.3
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 2.5e-11 73.2 147 42.2
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 3.3e-11 72.8 94 57.4
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 3.3e-11 72.8 94 57.4
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 3.3e-11 72.8 140 40.0
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 3.3e-11 72.8 94 56.4
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 3.3e-11 72.8 81 65.4
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 3.3e-11 72.8 89 61.8
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 3.3e-11 72.8 88 59.1
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 4.3e-11 72.4 94 55.3
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 4.3e-11 72.4 94 51.1
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 4.3e-11 72.4 74 64.9
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 7.3e-11 71.6 126 46.0
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 1.3e-10 70.9 94 57.4
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 2.1e-10 70.1 89 56.2
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.8e-10 69.7 124 46.8
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 3.6e-10 69.3 94 52.1
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 3.6e-10 69.3 105 50.5
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 3.6e-10 69.3 88 60.2
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 4.8e-10 68.9 94 55.3
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 6.2e-10 68.6 94 54.3
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 1.1e-09 67.8 85 60.0
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 1.4e-09 67.4 94 53.2
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 1.4e-09 67.4 92 53.3
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 2.4e-09 66.6 126 45.2
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 2.4e-09 66.6 164 41.5
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 2.9e-07 59.7 103 49.5


User provided reference genes

Program Settings