Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 1.8e-169 599.7 444 100.0
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 1.8e-41 174.5 209 47.8
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 2.2e-39 167.5 202 50.5
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 2.9e-39 167.2 223 44.8
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 5.0e-39 166.4 209 48.3
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 5.0e-39 166.4 202 46.5
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 5.0e-39 166.4 206 48.5
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 5.0e-39 166.4 209 47.4
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 5.0e-39 166.4 202 49.0
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 6.5e-39 166.0 218 45.9
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 1.1e-38 165.2 204 48.0
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 1.5e-38 164.9 206 46.1
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 1.5e-38 164.9 210 43.3
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 1.9e-38 164.5 220 43.2
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 1.9e-38 164.5 227 43.2
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 3.2e-38 163.7 205 47.3
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 4.2e-38 163.3 204 46.1
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 5.5e-38 162.9 209 46.9
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 5.5e-38 162.9 202 46.0
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 5.5e-38 162.9 224 44.6
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 7.2e-38 162.5 223 43.5
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 9.4e-38 162.2 221 47.1
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 1.2e-37 161.8 221 45.7
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 1.6e-37 161.4 206 47.1
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 2.1e-37 161.0 209 46.4
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 2.7e-37 160.6 222 44.1
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 3.6e-37 160.2 220 41.8
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 3.6e-37 160.2 203 46.3
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 4.7e-37 159.8 223 43.5
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 4.7e-37 159.8 223 43.5
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 8.0e-37 159.1 204 45.6
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 1.0e-36 158.7 222 43.2
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 1.0e-36 158.7 202 44.6
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 1.0e-36 158.7 200 46.0
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.4e-36 158.3 210 45.7
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 1.8e-36 157.9 200 48.0
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 3.0e-36 157.1 228 41.7
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 4.0e-36 156.8 226 45.6
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 4.0e-36 156.8 220 42.3
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 4.0e-36 156.8 213 43.2
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 5.2e-36 156.4 209 45.9
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 5.2e-36 156.4 223 43.9
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 5.2e-36 156.4 205 43.9
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 5.2e-36 156.4 202 46.0
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 8.8e-36 155.6 207 44.9
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 8.8e-36 155.6 204 44.6
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 2.0e-35 154.5 210 43.3
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 2.0e-35 154.5 206 44.7
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 2.0e-35 154.5 219 42.0
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 2.0e-35 154.5 210 44.3
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 2.6e-35 154.1 204 44.6
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 2.6e-35 154.1 201 44.8
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 3.4e-35 153.7 204 42.6
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 3.4e-35 153.7 210 43.3
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 5.7e-35 152.9 201 45.3
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 7.5e-35 152.5 234 40.2
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 7.5e-35 152.5 213 43.7
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 7.5e-35 152.5 209 45.5
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 9.8e-35 152.1 207 44.4
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 1.3e-34 151.8 201 46.3
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 1.7e-34 151.4 225 40.4
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 1.7e-34 151.4 205 43.4
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 2.2e-34 151.0 207 43.5
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 2.2e-34 151.0 220 41.8
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 2.2e-34 151.0 227 42.3
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 2.2e-34 151.0 206 43.7
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 2.8e-34 150.6 204 44.6
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 3.7e-34 150.2 205 42.9
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 4.9e-34 149.8 239 41.4
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 4.9e-34 149.8 220 41.4
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 4.9e-34 149.8 220 41.4
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 4.9e-34 149.8 236 40.7
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 4.9e-34 149.8 236 40.7
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 6.3e-34 149.4 201 44.8
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 6.3e-34 149.4 205 43.9
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 6.3e-34 149.4 211 43.6
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 6.3e-34 149.4 207 45.9
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 6.3e-34 149.4 210 43.3
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 8.3e-34 149.1 190 47.9
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 8.3e-34 149.1 203 44.8
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 1.1e-33 148.7 214 43.0
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 1.1e-33 148.7 199 46.2
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.4e-33 148.3 203 44.8
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 3.1e-33 147.1 245 40.8
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 5.4e-33 146.4 201 43.3
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 5.4e-33 146.4 221 41.6
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 1.2e-32 145.2 209 44.5
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 1.2e-32 145.2 192 45.3
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 1.6e-32 144.8 202 45.0
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 2.0e-32 144.4 195 45.1
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 2.0e-32 144.4 200 43.5
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 3.5e-32 143.7 210 40.5
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 3.8e-31 140.2 209 44.0
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 6.6e-31 139.4 199 43.7
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 8.6e-31 139.0 198 44.4
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.1e-30 138.7 196 44.9
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.9e-30 137.9 199 42.7
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 1.9e-30 137.9 226 38.5
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 4.2e-30 136.7 223 41.7
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 6.1e-29 132.9 208 40.9
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 6.8e-28 129.4 214 38.8
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 4.4e-27 126.7 180 44.4
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 5.7e-27 126.3 202 41.6
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 3.7e-26 123.6 188 41.0
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 6.4e-26 122.9 188 44.1
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 3.2e-25 120.6 176 44.3
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 3.2e-25 120.6 270 35.2
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 5.0e-23 113.2 197 38.6
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 5.6e-22 109.8 201 37.3
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 1.8e-20 104.8 166 43.4
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 1.6e-16 91.7 78 57.7
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 1.3e-10 72.0 49 65.3
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 2.1e-08 64.7 57 56.1


User provided reference genes

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