Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c19_5890 Physcomitrium patens HOM05D005657 ORTHO05D007104 6.7e-198 693.7 332 100.0
SMO364G0117 Selaginella moellendorffii HOM05D005657 ORTHO05D007104 5.3e-86 322.0 327 51.4
Mapoly0156s0023 Marchantia polymorpha HOM05D005657 ORTHO05D007104 7.7e-85 318.2 325 52.6
SEGI_34988 Sequoiadendron giganteum HOM05D005657 ORTHO05D007104 1.9e-83 313.5 334 50.6
Prupe.4G082300 Prunus persica HOM05D005657 ORTHO05D007104 5.2e-81 305.4 324 50.6
CiPaw.09G122400 Carya illinoinensis HOM05D005657 ORTHO05D007104 4.4e-80 302.4 326 51.8
Ciclev10015992m.g Citrus clementina HOM05D005657 ORTHO05D007104 5.7e-80 302.0 280 56.1
MD05G1282500 Malus domestica HOM05D005657 ORTHO05D007104 2.2e-79 300.1 321 51.7
RcHm_v2.0_Chr5g0014371 Rosa chinensis HOM05D005657 ORTHO05D007104 6.3e-79 298.5 322 50.9
Ah.09g232540 Amaranthus hybridus HOM05D005657 ORTHO05D007104 8.2e-79 298.1 271 55.7
ATR1098G050 Amborella trichopoda HOM05D005657 ORTHO05D007104 1.4e-78 297.4 305 50.8
GSVIVG01021513001 Vitis vinifera HOM05D005657 ORTHO05D007104 1.8e-78 297.0 326 51.2
AagrBONN_evm.TU.Sc2ySwM_117.1613 Anthoceros agrestis HOM05D001134 ORTHO05D001035 2.4e-78 296.6 291 52.6
AT1G30130 Arabidopsis thaliana HOM05D005657 ORTHO05D007104 7.0e-78 295.0 325 48.9
Gohir.A05G147800 Gossypium hirsutum HOM05D005657 ORTHO05D007104 9.1e-78 294.7 323 50.8
Solyc05g053950.4 Solanum lycopersicum HOM05D005657 ORTHO05D007104 9.1e-78 294.7 326 50.6
FAN16G0196 Fragaria x ananassa HOM05D005657 ORTHO05D007104 1.2e-77 294.3 322 49.7
Thecc.06G148800 Theobroma cacao HOM05D005657 ORTHO05D007104 1.2e-77 294.3 329 49.2
FAN21G3134 Fragaria x ananassa HOM05D005657 ORTHO05D007104 1.6e-77 293.9 322 49.4
Nitab4.5_0000484g0050 Nicotiana tabacum HOM05D005657 ORTHO05D007104 1.6e-77 293.9 325 50.8
PSO339G2615 Papaver somniferum HOM05D005657 ORTHO05D007104 1.6e-77 293.9 320 50.0
Sopen05g032420 Solanum pennellii HOM05D005657 ORTHO05D007104 2.0e-77 293.5 324 50.3
Aqoxy1G01688 Aquilegia oxysepala HOM05D005657 ORTHO05D007104 4.5e-77 292.4 278 53.6
Hma1.2p1_0020F.1_g014110 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 4.5e-77 292.4 319 48.9
SalBow8G0891 Salvia bowleyana HOM05D005657 ORTHO05D007104 5.9e-77 292.0 322 50.0
MBI18_g24473_MAGBIO Magnolia biondii HOM05D005657 ORTHO05D007104 2.2e-76 290.0 319 50.2
Gohir.D05G150300 Gossypium hirsutum HOM05D005657 ORTHO05D007104 2.9e-76 289.7 321 49.8
Gorai.009G154400 Gossypium raimondii HOM05D005657 ORTHO05D007104 3.8e-76 289.3 323 50.2
FvH4_3g05380 Fragaria vesca HOM05D005657 ORTHO05D007104 6.5e-76 288.5 322 48.8
PGSC0003DMG401013075 Solanum tuberosum HOM05D005657 ORTHO05D007104 6.5e-76 288.5 326 50.0
Peaxi162Scf00394g00119 Petunia axillaris HOM05D005657 ORTHO05D007104 1.1e-75 287.7 253 56.9
TAR626G1592 Trochodendron aralioides HOM05D005657 ORTHO05D007104 1.1e-75 287.7 319 50.5
A08p24690 Brassica napus HOM05D005657 ORTHO05D007104 1.5e-75 287.3 323 48.9
Cfa000932 Carpinus fangiana HOM05D005657 ORTHO05D007104 1.5e-75 287.3 329 49.8
BraA08t34424Z Brassica rapa HOM05D005657 ORTHO05D007104 3.2e-75 286.2 323 48.9
PSO384G4094 Papaver somniferum HOM05D005657 ORTHO05D007104 3.2e-75 286.2 320 49.4
BcaB03g12197 Brassica carinata HOM05D005657 ORTHO05D007104 5.5e-75 285.4 323 49.8
C03p76410 Brassica napus HOM05D005657 ORTHO05D007104 5.5e-75 285.4 323 49.2
CAN.G1744.1 Capsicum annuum HOM05D005657 ORTHO05D007104 5.5e-75 285.4 329 49.5
BcaC01g00157 Brassica carinata HOM05D005657 ORTHO05D007104 7.2e-75 285.0 323 48.9
MSTRG.16252 Avicennia marina HOM05D005657 ORTHO05D007104 1.2e-74 284.3 321 49.8
Nn4g26588 Nelumbo nucifera HOM05D005657 ORTHO05D007104 2.1e-74 283.5 279 53.0
Sp1g25990 Schrenkiella parvula HOM05D005657 ORTHO05D007104 2.1e-74 283.5 325 49.2
Medtr2g019220 Medicago truncatula HOM05D005657 ORTHO05D007104 2.7e-74 283.1 263 55.9
TWI53G0207 Tripterygium wilfordii HOM05D005657 ORTHO05D007104 3.6e-74 282.7 323 49.5
FAN25G2659 Fragaria x ananassa HOM05D005657 ORTHO05D007104 4.7e-74 282.3 265 54.7
Lj6g0016438 Lotus japonicus HOM05D005657 ORTHO05D007104 4.7e-74 282.3 324 47.2
Potri.011G084000 Populus trichocarpa HOM05D005657 ORTHO05D007104 4.7e-74 282.3 269 55.0
PGR031G0971 Punica granatum HOM05D005657 ORTHO05D007104 6.1e-74 282.0 320 48.4
Actinidia39582 Actinidia chinensis HOM05D005657 ORTHO05D007104 8.0e-74 281.6 325 48.9
Thhalv10008271m.g Eutrema salsugineum HOM05D005657 ORTHO05D007104 8.0e-74 281.6 319 48.6
Eucgr.E01441 Eucalyptus grandis HOM05D005657 ORTHO05D007104 1.0e-73 281.2 269 53.2
Oeu042460.1 Olea europaea HOM05D005657 ORTHO05D007104 1.0e-73 281.2 328 49.4
BolC3t19896H Brassica oleracea HOM05D005657 ORTHO05D007104 2.3e-73 280.0 324 48.8
Manes.17G071500 Manihot esculenta HOM05D005657 ORTHO05D007104 2.3e-73 280.0 323 49.2
CANSAT35G1510 Cannabis sativa HOM05D005657 ORTHO05D007104 6.8e-73 278.5 321 48.6
Carub.0001s2836 Capsella rubella HOM05D005657 ORTHO05D007104 8.8e-73 278.1 323 48.3
Cc07_g20130 Coffea canephora HOM05D005657 ORTHO05D007104 8.8e-73 278.1 321 47.7
Ca_00535_v3 Cicer arietinum L. HOM05D005657 ORTHO05D007104 1.5e-72 277.3 323 49.5
Duzib192G0691 Durio zibethinus HOM05D005657 ORTHO05D007104 2.0e-72 276.9 340 48.5
Aa31LG6G5550 Aethionema arabicum HOM05D005657 ORTHO05D007104 2.6e-72 276.6 326 48.8
arahy.Tifrunner.gnm1.ann1.1GZ3A6 Arachis hypogaea HOM05D005657 ORTHO05D007104 4.4e-72 275.8 320 47.2
CARHR029280 Cardamine hirsuta HOM05D005657 ORTHO05D007104 4.4e-72 275.8 325 47.7
VMungo0540G0312 Vigna mungo HOM05D005657 ORTHO05D007104 4.4e-72 275.8 324 46.6
Sabra11G0066600 Salix brachista HOM05D005657 ORTHO05D007104 5.7e-72 275.4 269 52.8
arahy.Tifrunner.gnm1.ann1.PL5EIV Arachis hypogaea HOM05D005657 ORTHO05D007104 7.5e-72 275.0 320 47.5
HanXRQChr16g0525711 Helianthus annuus HOM05D005657 ORTHO05D007104 9.8e-72 274.6 320 46.9
Psat1g188200 Pisum sativum HOM05D005657 ORTHO05D007104 1.3e-71 274.2 269 53.2
QL05p057428 Quercus lobata HOM05D005657 ORTHO05D007104 1.3e-71 274.2 329 48.9
DCAR_007885 Daucus carota HOM05D005657 ORTHO05D007104 1.7e-71 273.9 320 48.4
Glyma.13G219000 Glycine max HOM05D005657 ORTHO05D007104 2.2e-71 273.5 321 47.4
AUR62002729 Chenopodium quinoa HOM05D005657 ORTHO05D007104 4.8e-71 272.3 214 59.8
ClCG01G024690 Citrullus lanatus HOM05D005657 ORTHO05D007104 4.8e-71 272.3 319 47.0
HPP92_012186 Vanilla planifolia HOM05D005657 ORTHO05D007104 4.8e-71 272.3 328 47.3
Sed0002032 Sechium edule HOM05D005657 ORTHO05D007104 6.3e-71 271.9 254 54.3
CsaV3_6G051800 Cucumis sativus L. HOM05D005657 ORTHO05D007104 1.1e-70 271.2 321 46.7
Zm00001eb300160 Zea mays HOM05D005657 ORTHO05D007104 1.4e-70 270.8 331 45.9
MELO3C007126.2 Cucumis melo HOM05D005657 ORTHO05D007104 1.8e-70 270.4 264 53.0
CSS0046586 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 3.1e-70 269.6 321 46.7
EL10Ac8g19662 Beta vulgaris HOM05D005657 ORTHO05D007104 9.1e-70 268.1 328 47.3
Lsat_1_v5_gn_4_29400 Lactuca sativa HOM05D005657 ORTHO05D007104 1.2e-69 267.7 325 46.5
Sc24g0001740 Simmondsia chinensis HOM05D005657 ORTHO05D007104 1.2e-69 267.7 322 47.5
Lalb_Chr18g0055371 Lupinus albus HOM05D005657 ORTHO05D007104 3.5e-69 266.2 324 46.0
CSS0036233 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 1.0e-68 264.6 321 45.5
Haze_05617 Corylus avellana HOM05D005657 ORTHO05D007104 1.0e-68 264.6 365 44.1
TPR.G26236 Trifolium pratense HOM05D005657 ORTHO05D007104 1.3e-68 264.2 275 49.1
Migut.D01761 Erythranthe guttata HOM05D005657 ORTHO05D007104 2.3e-68 263.5 243 57.2
Dinv30768 Davidia involucrata HOM05D005657 ORTHO05D007104 2.1e-66 256.9 242 55.4
ECA234G1983 Erigeron canadensis HOM05D005657 ORTHO05D007104 1.0e-65 254.6 322 43.2
Nitab4.5_0000717g0030 Nicotiana tabacum HOM05D005657 ORTHO05D007104 1.8e-65 253.8 244 55.7
vmacro10957 Vaccinium macrocarpon HOM05D005657 ORTHO05D007104 2.0e-64 250.4 371 42.3
THA.LOC104812673 Tarenaya hassleriana HOM05D005657 ORTHO05D007104 4.4e-64 249.2 327 43.7
TPR.G26242 Trifolium pratense HOM05D005657 ORTHO05D007104 2.8e-63 246.5 221 54.8
CDE01G0002 Ceratophyllum demersum HOM05D005657 ORTHO05D007104 5.4e-62 242.3 201 59.2
DCAR_027907 Daucus carota HOM05D005657 ORTHO05D007104 8.3e-55 218.4 280 44.3
Rhsim02G0159200 Rhododendron simsii HOM05D005657 ORTHO05D007104 1.1e-54 218.0 325 43.7
FAN11G2536 Fragaria x ananassa HOM05D005657 ORTHO05D007104 2.7e-53 213.4 322 40.7
Lj2A319G39 Lonicera japonica HOM05D005657 ORTHO05D007104 6.0e-53 212.2 244 49.2
DCAR_027906 Daucus carota HOM05D005657 ORTHO05D007104 7.8e-53 211.8 280 43.2
SalBow2G3627 Salvia bowleyana HOM05D005657 ORTHO05D007104 2.3e-52 210.3 324 39.5
DCAR_027905 Daucus carota HOM05D005657 ORTHO05D007104 6.6e-52 208.8 255 44.7
AUR62030180 Chenopodium quinoa HOM05D005657 ORTHO05D007104 9.5e-51 204.9 162 58.6
BcaB03g12196 Brassica carinata HOM05D005657 ORTHO05D007104 4.7e-50 202.6 155 61.9
Phvul.006G165700 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 8.0e-50 201.8 324 38.6
Actinidia07705 Actinidia chinensis HOM05D005657 ORTHO05D007104 3.4e-48 196.4 181 55.8
Hund15862 Selenicereus undatus HOM05D005657 ORTHO05D007104 2.2e-47 193.7 320 40.6
Hma1.2p1_0020F.1_g014100 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 6.4e-47 192.2 174 57.5
Os07g0153300 Oryza sativa ssp. japonica HOM05D005657 ORTHO05D007104 3.5e-45 186.4 155 60.6
PRCOL_00005919 Prasinoderma coloniale HOM05D005657 ORTHO05D007104 1.3e-44 184.5 325 36.9
MCO14G385 Micromonas commoda HOM05D005657 ORTHO05D007104 3.0e-44 183.3 304 38.5
Glyma.15G093200 Glycine max HOM05D005657 ORTHO05D007104 6.6e-44 182.2 186 52.7
Cre06.g269300 Chlamydomonas reinhardtii HOM05D005657 ORTHO05D007104 1.5e-43 181.0 236 44.1
Atru.chr10.1193 Acer truncatum HOM05D005657 ORTHO05D007104 1.9e-43 180.6 213 47.9
CBR_g39195 Chara braunii HOM05D005657 ORTHO05D007104 2.0e-40 170.6 411 30.7
SGA_v2.0_scaffold333G48980 Striga asiatica HOM05D005657 ORTHO05D007104 7.1e-38 162.2 126 61.1
AUR62002725 Chenopodium quinoa HOM05D005657 ORTHO05D007104 2.4e-33 147.1 216 39.8
Rhsim02G0159300 Rhododendron simsii HOM05D005657 ORTHO05D007104 5.8e-32 142.5 217 40.1
SalBow2G2566 Salvia bowleyana HOM05D005657 ORTHO05D007104 2.3e-28 130.6 318 31.4
unitig_26.g9756 Utricularia gibba HOM05D005657 ORTHO05D007104 1.9e-27 127.5 147 48.3
TPR.G26247 Trifolium pratense HOM05D005657 ORTHO05D007104 1.2e-21 108.2 107 50.5
Hma1.2p1_0020F.1_g014120 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 1.3e-20 104.8 145 38.6
PGSC0003DMG400002455 Solanum tuberosum HOM05D005657 ORTHO05D007104 1.7e-20 104.4 142 40.8
SalBow2G0785 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.5e-19 101.3 166 38.0
SGA_v2.0_scaffold37G14914 Striga asiatica HOM05D005657 ORTHO05D007104 1.4e-17 94.7 62 71.0
COL.COLO4_31053 Corchorus olitorius HOM05D005657 ORTHO05D007104 2.4e-09 67.4 55 58.2
Glyma.08G293333 Glycine max HOM05D005657 ORTHO05D007104 1.2e-08 65.1 51 58.8
TPR.G7274 Trifolium pratense HOM05D005657 ORTHO05D007104 3.4e-08 63.5 58 48.3
SGA_v2.0_scaffold119G32786 Striga asiatica HOM05D005657 ORTHO05D007104 4.5e-08 63.2 31 90.3
SGA_v2.0_scaffold118G32549 Striga asiatica HOM05D005657 ORTHO05D007104 1.3e-07 61.6 40 72.5
unitig_26.g9757 Utricularia gibba HOM05D005657 ORTHO05D007104 1.3e-07 61.6 66 43.9
CSS0012720 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 1.4e-06 58.2 36 69.4
Phvul.007G245866 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 5.5e-06 56.2 47 53.2


User provided reference genes

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