Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c19_2470 Physcomitrium patens HOM05D000101 ORTHO05D010397 7.5e-118 427.2 211 100.0
Pp3c3_1350 Physcomitrium patens HOM05D000101 ORTHO05D010397 2.1e-59 233.0 304 50.7
Pp3c3_1480 Physcomitrium patens HOM05D000101 ORTHO05D010397 5.6e-57 224.9 304 50.0
Pp3c3_1260 Physcomitrium patens HOM05D000101 ORTHO05D010397 2.1e-56 223.0 303 50.5
Pp3c3_570 Physcomitrium patens HOM05D000101 ORTHO05D010397 5.1e-50 201.8 195 61.0
Pp3c3_1280 Physcomitrium patens HOM05D000101 ORTHO05D010397 5.7e-49 198.4 328 45.7
Pp3c16_20430 Physcomitrium patens HOM05D000101 ORTHO05D010397 7.9e-27 124.8 303 35.6
Pp3c3_6800 Physcomitrium patens HOM05D000101 ORTHO05D010397 1.1e-17 94.4 72 72.2
Rhsim12G0033300 Rhododendron simsii HOM05D000101 ORTHO05D003282 2.0e-09 67.0 95 42.1
RhsimUnG0213500 Rhododendron simsii HOM05D000101 ORTHO05D003282 2.0e-09 67.0 92 45.7
Rhsim12G0032100 Rhododendron simsii HOM05D000101 ORTHO05D000089 2.6e-09 66.6 95 43.2
Rhsim12G0031200 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.3e-08 64.3 95 42.1
GSVIVG01023203001 Vitis vinifera HOM05D000101 ORTHO05D003282 1.3e-08 64.3 177 33.9
Rhsim12G0030900 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.7e-08 63.9 92 44.6
Rhsim12G0032200 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.7e-08 63.9 95 41.1
arahy.Tifrunner.gnm1.ann1.8BMB32 Arachis hypogaea HOM05D000101 ORTHO05D003282 2.2e-08 63.5 96 42.7
Rhsim12G0031500 Rhododendron simsii HOM05D000101 ORTHO05D003282 2.8e-08 63.2 92 43.5
GSVIVG01023210001 Vitis vinifera HOM05D000101 ORTHO05D003282 3.7e-08 62.8 170 33.5
Rhsim12G0032500 Rhododendron simsii HOM05D000101 ORTHO05D000089 6.3e-08 62.0 95 40.0
Rhsim12G0032900 Rhododendron simsii HOM05D000101 ORTHO05D003282 6.3e-08 62.0 95 40.0
Rhsim12G0034700 Rhododendron simsii HOM05D000101 ORTHO05D003282 6.3e-08 62.0 95 40.0
RhsimUnG0083100 Rhododendron simsii HOM05D000101 ORTHO05D003282 6.3e-08 62.0 90 45.6
Rhsim12G0032400 Rhododendron simsii HOM05D000101 ORTHO05D000089 8.3e-08 61.6 95 40.0
Cc03_g13770 Coffea canephora HOM05D000101 ORTHO05D003282 1.1e-07 61.2 89 38.2
Rhsim12G0032300 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.1e-07 61.2 92 41.3
Lsat_1_v5_gn_9_121401 Lactuca sativa HOM05D000101 ORTHO05D003282 1.4e-07 60.8 94 35.1
Rhsim12G0033000 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.4e-07 60.8 92 41.3
Thecc.03G111000 Theobroma cacao HOM05D000101 ORTHO05D003282 1.4e-07 60.8 91 37.4
TAR624G0061 Trochodendron aralioides HOM05D000101 ORTHO05D002559 1.4e-07 60.8 95 38.9
COL.COLO4_28824 Corchorus olitorius HOM05D000101 ORTHO05D003282 2.4e-07 60.1 91 39.6
MBI12_g17628_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D003282 2.4e-07 60.1 98 40.8
Rhsim12G0034200 Rhododendron simsii HOM05D000101 ORTHO05D000089 2.4e-07 60.1 92 40.2
arahy.Tifrunner.gnm1.ann1.EZ6YKV Arachis hypogaea HOM05D000101 ORTHO05D003282 3.1e-07 59.7 96 41.7
Thecc.03G111300 Theobroma cacao HOM05D000101 ORTHO05D003282 3.1e-07 59.7 91 38.5
arahy.Tifrunner.gnm1.ann1.L44J93 Arachis hypogaea HOM05D000101 ORTHO05D003282 4.1e-07 59.3 96 41.7
AUR62034231 Chenopodium quinoa HOM05D000101 ORTHO05D000089 4.1e-07 59.3 96 38.5
Nn1g09693 Nelumbo nucifera HOM05D000101 ORTHO05D003282 4.1e-07 59.3 95 40.0
Haze_10009 Corylus avellana HOM05D000101 ORTHO05D003282 5.4e-07 58.9 91 39.6
TAR624G1018 Trochodendron aralioides HOM05D000101 ORTHO05D003282 7.0e-07 58.5 95 38.9
FAN11G0419 Fragaria x ananassa HOM05D000092 ORTHO05D000042 9.1e-07 58.2 94 38.3
FAN16G2006 Fragaria x ananassa HOM05D000092 ORTHO05D000042 9.1e-07 58.2 95 40.0
Gohir.A07G057900 Gossypium hirsutum HOM05D000101 ORTHO05D003282 9.1e-07 58.2 90 37.8
Gohir.D07G062700 Gossypium hirsutum HOM05D000101 ORTHO05D003282 9.1e-07 58.2 90 37.8
FAN11G3840 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.2e-06 57.8 95 37.9
Gorai.001G066200 Gossypium raimondii HOM05D000101 ORTHO05D003282 1.2e-06 57.8 90 37.8
RcHm_v2.0_Chr5g0080311 Rosa chinensis HOM05D000092 ORTHO05D000042 1.2e-06 57.8 94 37.2
PGSC0003DMG400007385 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.2e-06 57.8 95 38.9
GSVIVG01023173001 Vitis vinifera HOM05D000101 ORTHO05D002559 1.2e-06 57.8 142 35.9
COL.COLO4_08147 Corchorus olitorius HOM05D000101 ORTHO05D002559 1.6e-06 57.4 95 38.9
Lj5C15T0 Lonicera japonica HOM05D000101 ORTHO05D003282 1.6e-06 57.4 95 38.9
Lj5C281T0 Lonicera japonica HOM05D000101 ORTHO05D002559 1.6e-06 57.4 214 29.4
RcHm_v2.0_Chr3g0488681 Rosa chinensis HOM05D000092 ORTHO05D000042 1.6e-06 57.4 131 29.8
FvH4_3g35890 Fragaria vesca HOM05D000092 ORTHO05D000042 2.0e-06 57.0 105 39.0
RcHm_v2.0_Chr5g0079591 Rosa chinensis HOM05D000092 ORTHO05D000042 2.0e-06 57.0 94 37.2
FAN25G2124 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.5e-06 56.2 74 41.9
FAN11G0546 Fragaria x ananassa HOM05D000092 ORTHO05D000042 4.5e-06 55.8 94 37.2
Hund03195 Selenicereus undatus HOM05D000101 ORTHO05D003282 4.5e-06 55.8 92 37.0
FvH4_3g44561 Fragaria vesca HOM05D000092 ORTHO05D000042 5.9e-06 55.5 105 35.2
Glyma.08G123300 Glycine max HOM05D000101 ORTHO05D003282 5.9e-06 55.5 91 38.5
Lj5C584T0 Lonicera japonica HOM05D000101 ORTHO05D003282 5.9e-06 55.5 95 38.9
Rhsim04G0236100 Rhododendron simsii HOM05D000101 ORTHO05D000089 5.9e-06 55.5 96 36.5
Rhsim12G0033900 Rhododendron simsii HOM05D000101 ORTHO05D003282 5.9e-06 55.5 92 40.2
Atru.chr4.1408 Acer truncatum HOM05D000101 ORTHO05D002559 7.7e-06 55.1 169 32.5
EL10Ac3g06069 Beta vulgaris HOM05D000101 ORTHO05D003282 7.7e-06 55.1 92 37.0
Eucgr.F00837 Eucalyptus grandis HOM05D000101 ORTHO05D000089 7.7e-06 55.1 95 38.9
Eucgr.L00913 Eucalyptus grandis HOM05D000101 ORTHO05D003282 7.7e-06 55.1 95 37.9
FvH4_3g35820 Fragaria vesca HOM05D000092 ORTHO05D000042 7.7e-06 55.1 74 40.5
Lj5A582T23 Lonicera japonica HOM05D000101 ORTHO05D003282 7.7e-06 55.1 95 38.9
Rhsim04G0237500 Rhododendron simsii HOM05D000101 ORTHO05D000089 7.7e-06 55.1 101 36.6
TAR636G3578 Trochodendron aralioides HOM05D000092 ORTHO05D000042 7.7e-06 55.1 81 40.7


User provided reference genes

Program Settings