Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 2103.6 1047 100.0
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1687.2 1047 79.7
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1637.1 1021 79.7
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1622.4 1043 76.9
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1612.0 1046 76.9
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 1585.9 1047 74.5
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 1583.5 1047 74.1
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1582.4 1045 75.2
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1581.2 1047 74.3
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 1571.6 1052 74.5
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 1570.8 1045 74.2
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 1570.4 1050 73.3
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 1569.3 1046 74.5
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1568.9 1045 74.2
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1565.4 1045 74.1
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 1565.4 1047 73.9
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 1565.4 1047 73.6
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 1565.4 1047 73.6
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1565.1 1045 74.2
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 1564.3 1047 74.3
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 1564.3 1047 74.1
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 1563.1 1048 73.6
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 1562.7 1048 73.8
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 1562.7 1050 73.6
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1561.6 1047 74.2
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 1561.2 1052 73.6
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 1561.2 1047 74.1
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 1560.8 1047 73.4
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 1559.7 1048 74.0
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 1559.7 1047 73.8
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 1559.7 1048 74.0
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 1559.3 1047 73.8
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 1558.9 1052 73.7
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 1558.5 1047 73.2
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 1558.1 1050 73.5
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1556.6 1039 74.0
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 1555.8 1050 73.2
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1554.7 1047 73.5
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 1554.3 1046 73.4
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 1552.0 1047 73.4
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 1551.6 1050 73.0
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 1551.6 1047 73.1
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 1550.8 1051 73.0
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 1550.4 1048 72.9
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 1550.0 1047 72.9
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 1550.0 1050 73.3
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 1549.6 1047 73.1
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 1549.6 1047 73.4
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 1548.1 1046 72.7
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1547.7 1047 73.2
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 1547.7 1048 73.1
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 1547.7 1047 72.5
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 1547.3 1047 73.4
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 1547.3 1047 73.4
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 1547.3 1047 73.1
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 1546.6 1052 72.9
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 1545.8 1048 73.1
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 1545.8 1046 72.8
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 1544.6 1047 73.0
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1544.6 1048 73.0
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 1544.3 1049 72.4
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 1543.9 1047 73.4
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 1543.9 1047 72.8
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 1543.9 1050 73.0
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 1543.9 1046 73.0
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 1543.5 1045 72.5
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1543.1 1047 73.0
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 1542.7 1047 72.6
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 1542.3 1047 72.7
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 1541.6 1047 72.5
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 1541.6 1049 72.6
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 1540.4 1046 73.1
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1539.2 1047 72.6
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 1539.2 1047 72.6
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 1539.2 1049 73.2
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 1539.2 1043 72.9
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 1538.5 1049 72.6
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 1535.8 1047 72.8
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 1535.4 1045 72.7
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 1534.6 1047 72.7
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1534.2 1047 72.3
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 1533.5 1052 72.7
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 1532.3 1038 72.8
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 1531.5 1043 72.9
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 1530.4 1047 72.0
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 1530.0 1047 72.4
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 1525.4 1047 72.1
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 1520.0 1046 71.9
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 1520.0 1044 72.3
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1513.8 1047 71.6
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 1512.7 1046 72.0
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 1509.2 1046 71.0
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 1506.1 1026 72.2
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 1504.2 1029 72.2
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1502.6 1022 73.2
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 1500.0 1046 71.1
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 1497.6 1049 69.7
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1492.2 1019 72.7
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 1486.5 1047 71.2
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1454.5 1047 69.1
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1409.0 972 71.4
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1409.0 1047 66.7
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1380.9 1047 66.8
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1373.6 939 72.8
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1296.2 1082 62.0
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1285.0 1015 64.7
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1239.2 906 69.3
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1220.3 1047 61.2
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1220.3 868 70.4
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1212.2 824 73.1
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1100.5 1108 54.1
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1098.2 1159 53.0
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.9e-310 1069.3 735 72.9
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 2.1e-285 986.1 1020 53.9
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 1.3e-279 966.8 940 56.2
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 2.8e-234 816.2 580 71.7
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 4.7e-229 798.9 1062 42.0
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 1.9e-201 707.2 533 68.5
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 4.0e-180 636.3 580 57.8
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.3e-165 588.2 468 66.9
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-148 530.4 460 61.5
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 6.3e-133 479.6 361 67.9
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 4.4e-118 430.3 271 76.0
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 4.9e-109 400.2 312 68.3
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 6.4e-77 293.5 192 76.0
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.3e-56 226.1 138 79.7
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 6.2e-56 223.8 294 44.9
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 1.1e-44 186.4 117 74.4
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.0e-37 163.3 157 58.0
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 5.5e-36 157.5 91 79.1
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 1.6e-35 156.0 100 70.0
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 2.7e-35 155.2 171 51.5
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 1.0e-26 126.7 96 67.7
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 9.1e-07 60.5 36 77.8


User provided reference genes

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