Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c19_20210 Physcomitrium patens HOM05D007364 ORTHO05D009275 8.7e-79 297.0 158 100.0
Mapoly0061s0135 Marchantia polymorpha HOM05D007364 ORTHO05D009275 6.2e-16 88.2 114 39.5
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.9e-13 79.3 126 38.1
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.9e-13 79.3 126 38.1
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 2.9e-13 79.3 116 40.5
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 6.4e-13 78.2 133 38.3
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 1.9e-12 76.6 133 39.1
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 2.4e-12 76.3 132 38.6
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 5.4e-12 75.1 116 39.7
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 9.2e-12 74.3 139 38.1
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 9.2e-12 74.3 123 37.4
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 1.2e-11 73.9 134 37.3
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 1.6e-11 73.6 133 38.3
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 2.1e-11 73.2 150 34.7
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 2.7e-11 72.8 139 37.4
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 2.7e-11 72.8 141 36.9
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 2.7e-11 72.8 151 33.8
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 1.0e-10 70.9 127 37.8
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 1.0e-10 70.9 116 37.9
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 1.0e-10 70.9 130 36.2
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 1.7e-10 70.1 128 35.2
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 1.7e-10 70.1 129 38.0
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 2.3e-10 69.7 117 38.5
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 3.9e-10 68.9 137 32.8
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 3.9e-10 68.9 112 37.5
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 5.1e-10 68.6 115 35.7
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 6.6e-10 68.2 140 32.1
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 1.1e-09 67.4 129 34.9
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 2.5e-09 66.2 116 32.8
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 2.5e-09 66.2 125 35.2
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 3.3e-09 65.9 128 34.4
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 3.3e-09 65.9 129 34.1
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 4.3e-09 65.5 118 33.9
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 4.3e-09 65.5 138 34.1
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 7.3e-09 64.7 116 33.6
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 7.3e-09 64.7 118 33.9
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 1.2e-08 63.9 121 32.2
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 1.6e-08 63.5 137 33.6
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 1.6e-08 63.5 102 40.2
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 1.6e-08 63.5 119 36.1
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 2.1e-08 63.2 147 32.0
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 2.8e-08 62.8 126 34.9
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 6.2e-08 61.6 129 33.3
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 6.2e-08 61.6 125 33.6
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 6.2e-08 61.6 136 30.9
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 1.1e-07 60.8 144 30.6
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 1.4e-07 60.5 125 32.8
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 1.4e-07 60.5 113 36.3
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 1.8e-07 60.1 132 34.8
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 2.3e-07 59.7 111 33.3
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 5.2e-07 58.5 125 34.4
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 6.8e-07 58.2 147 31.3
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 6.8e-07 58.2 149 30.2
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 8.9e-07 57.8 121 32.2
CBR_g26352 Chara braunii HOM05D007364 ORTHO05D009275 8.9e-07 57.8 130 30.8
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 8.9e-07 57.8 128 34.4
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 8.9e-07 57.8 155 30.3
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 1.2e-06 57.4 129 31.8
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 1.2e-06 57.4 119 31.9
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 1.5e-06 57.0 129 31.0
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 2.0e-06 56.6 129 31.0
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 2.0e-06 56.6 126 33.3
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 2.6e-06 56.2 119 37.0
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 4.4e-06 55.5 124 33.1
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.4e-06 55.5 124 33.1
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.4e-06 55.5 124 33.1
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 4.4e-06 55.5 78 42.3
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 4.4e-06 55.5 131 30.5
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 7.6e-06 54.7 126 31.0
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 7.6e-06 54.7 140 29.3
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 9.9e-06 54.3 156 32.1
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 9.9e-06 54.3 147 28.6


User provided reference genes

Program Settings