Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 5.7e-127 457.6 231 100.0
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 6.0e-52 208.4 156 62.8
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 7.8e-52 208.0 161 62.1
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 2.3e-51 206.5 204 51.0
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 2.3e-51 206.5 156 60.3
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 6.6e-51 204.9 218 49.5
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 6.6e-51 204.9 163 58.3
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 1.9e-50 203.4 159 57.9
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 1.9e-50 203.4 156 60.3
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 4.3e-50 202.2 159 59.1
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 4.3e-50 202.2 160 58.1
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 7.3e-50 201.4 212 50.0
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 1.2e-49 200.7 159 59.1
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 3.6e-49 199.1 158 58.9
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 4.7e-49 198.7 158 58.2
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 4.7e-49 198.7 162 58.6
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 4.7e-49 198.7 153 58.2
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 1.4e-48 197.2 163 58.3
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 2.4e-48 196.4 164 56.7
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 4.0e-48 195.7 158 57.6
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 5.2e-48 195.3 189 51.9
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 6.8e-48 194.9 158 59.5
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 8.9e-48 194.5 161 54.7
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 1.2e-47 194.1 152 60.5
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 1.5e-47 193.7 160 57.5
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 2.0e-47 193.4 159 58.5
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 2.0e-47 193.4 158 55.1
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 2.0e-47 193.4 151 59.6
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 2.6e-47 193.0 158 58.2
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 3.4e-47 192.6 161 54.7
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 3.4e-47 192.6 172 53.5
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 5.8e-47 191.8 152 59.2
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 5.8e-47 191.8 152 57.2
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 7.6e-47 191.4 191 48.7
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 1.3e-46 190.7 160 56.9
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 1.7e-46 190.3 159 56.0
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 1.7e-46 190.3 159 56.0
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 1.7e-46 190.3 159 55.3
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 1.7e-46 190.3 187 51.3
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 2.2e-46 189.9 156 60.3
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 2.2e-46 189.9 158 57.6
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 3.8e-46 189.1 159 56.6
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 3.8e-46 189.1 209 49.3
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 4.9e-46 188.7 160 55.0
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 4.9e-46 188.7 163 52.8
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 4.9e-46 188.7 156 55.8
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 6.4e-46 188.3 158 55.7
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 6.4e-46 188.3 191 48.2
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 6.4e-46 188.3 157 57.3
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 8.4e-46 188.0 153 57.5
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 1.1e-45 187.6 156 57.1
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 1.1e-45 187.6 159 56.6
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 1.1e-45 187.6 156 57.1
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 1.1e-45 187.6 164 54.9
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 1.4e-45 187.2 159 56.6
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 1.4e-45 187.2 184 52.2
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 1.4e-45 187.2 185 50.8
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 1.4e-45 187.2 159 54.7
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 1.4e-45 187.2 157 55.4
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 1.9e-45 186.8 157 56.1
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 2.4e-45 186.4 182 52.2
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 2.4e-45 186.4 160 55.0
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 3.2e-45 186.0 159 56.6
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 4.2e-45 185.7 160 54.4
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 7.1e-45 184.9 163 51.5
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 7.1e-45 184.9 152 57.2
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 7.1e-45 184.9 177 50.3
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 7.1e-45 184.9 152 55.9
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 1.2e-44 184.1 152 57.2
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 1.6e-44 183.7 153 58.2
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 2.1e-44 183.3 160 54.4
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 2.1e-44 183.3 151 55.0
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 2.7e-44 183.0 172 50.6
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 2.7e-44 183.0 202 46.5
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 3.5e-44 182.6 151 54.3
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 6.0e-44 181.8 161 55.3
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 7.8e-44 181.4 156 56.4
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 1.3e-43 180.6 152 56.6
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 1.7e-43 180.3 167 53.9
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 1.7e-43 180.3 163 54.0
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 2.3e-43 179.9 167 53.9
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 3.9e-43 179.1 152 55.9
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 1.5e-42 177.2 151 53.6
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 1.9e-42 176.8 156 53.2
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 1.9e-42 176.8 172 49.4
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 5.6e-42 175.3 156 53.8
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 9.6e-42 174.5 156 54.5
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 9.6e-42 174.5 192 46.9
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 9.6e-42 174.5 156 53.8
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 1.1e-40 171.0 171 50.3
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 2.0e-39 166.8 134 59.7
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 2.0e-39 166.8 156 53.8
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 2.6e-39 166.4 134 59.7
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 1.2e-36 157.5 124 58.9
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.1e-36 156.8 119 60.5
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.5e-34 150.6 165 48.5
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 7.3e-34 148.3 151 47.7
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 1.4e-29 134.0 108 58.3
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 4.2e-29 132.5 122 56.6
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 2.7e-28 129.8 142 46.5
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 4.2e-21 105.9 88 54.5
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 3.9e-19 99.4 81 56.8
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 8.7e-19 98.2 172 37.2
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 3.7e-17 92.8 149 35.6
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 6.2e-17 92.0 80 58.8
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.6e-09 67.4 115 35.7
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 9.0e-08 61.6 90 41.1
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 1.0e-06 58.2 74 39.2


User provided reference genes

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