Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c18_3000 Physcomitrium patens HOM05D001103 ORTHO05D000954 1.7e-75 286.6 223 100.0
Pp3c21_20150 Physcomitrium patens HOM05D001103 ORTHO05D000954 4.8e-30 135.6 222 65.3
Pp3s177_60 Physcomitrium patens HOM05D001103 ORTHO05D000954 4.8e-30 135.6 222 65.3
Pp3c7_2540 Physcomitrium patens HOM05D001103 ORTHO05D000954 1.3e-11 74.3 212 53.3
Pp3c11_23600 Physcomitrium patens HOM05D001103 ORTHO05D000954 3.8e-11 72.8 208 58.2
Actinidia12397 Actinidia chinensis HOM05D001103 ORTHO05D000954 9.3e-10 68.2 103 71.8
Phvul.002G321500 Phaseolus vulgaris HOM05D001103 ORTHO05D000954 1.6e-09 67.4 102 71.6
VMungo0251G1830 Vigna mungo HOM05D001103 ORTHO05D000954 1.6e-09 67.4 102 70.6
Actinidia36623 Actinidia chinensis HOM05D001103 ORTHO05D000954 3.5e-09 66.2 98 73.5
Nn4g24398 Nelumbo nucifera HOM05D001103 ORTHO05D000954 3.5e-09 66.2 98 81.6
Sopen05g014550 Solanum pennellii HOM05D001103 ORTHO05D000954 4.6e-09 65.9 98 73.5
PGSC0003DMG400021781 Solanum tuberosum HOM05D001103 ORTHO05D000954 4.6e-09 65.9 98 73.5
Lj2g0004872 Lotus japonicus HOM05D001103 ORTHO05D000954 6.0e-09 65.5 102 69.6
Nitab4.5_0000282g0060 Nicotiana tabacum HOM05D001103 ORTHO05D000954 7.9e-09 65.1 98 73.5
Nitab4.5_0008786g0010 Nicotiana tabacum HOM05D001103 ORTHO05D000954 7.9e-09 65.1 98 73.5
Solyc04g008040.4 Solanum lycopersicum HOM05D001103 ORTHO05D000954 7.9e-09 65.1 98 75.5
Solyc05g017980.3 Solanum lycopersicum HOM05D001103 ORTHO05D000954 7.9e-09 65.1 98 73.5
Sopen04g003190 Solanum pennellii HOM05D001103 ORTHO05D000954 7.9e-09 65.1 98 75.5
PGSC0003DMG400029515 Solanum tuberosum HOM05D001103 ORTHO05D000954 7.9e-09 65.1 98 75.5
THA.LOC104807931 Tarenaya hassleriana HOM05D001103 ORTHO05D000954 7.9e-09 65.1 103 76.7
TAR622G1427 Trochodendron aralioides HOM05D001103 ORTHO05D000954 7.9e-09 65.1 96 72.9
Glyma.07G170700 Glycine max HOM05D001103 ORTHO05D000954 1.0e-08 64.7 101 67.3
THA.LOC104800010 Tarenaya hassleriana HOM05D001103 ORTHO05D000954 1.0e-08 64.7 99 81.8
Lalb_Chr10g0095681 Lupinus albus HOM05D001103 ORTHO05D000954 1.3e-08 64.3 102 72.5
Nitab4.5_0002803g0030 Nicotiana tabacum HOM05D001103 ORTHO05D000954 1.3e-08 64.3 98 75.5
arahy.Tifrunner.gnm1.ann1.H20A63 Arachis hypogaea HOM05D001103 ORTHO05D000954 1.8e-08 63.9 102 66.7
arahy.Tifrunner.gnm1.ann1.ID7VTD Arachis hypogaea HOM05D001103 ORTHO05D000954 1.8e-08 63.9 102 66.7
Ca_23394_v3 Cicer arietinum L. HOM05D001103 ORTHO05D000954 1.8e-08 63.9 102 67.6
Dinv07724 Davidia involucrata HOM05D001103 ORTHO05D000954 1.8e-08 63.9 98 72.4
Dinv10470 Davidia involucrata HOM05D001103 ORTHO05D000954 1.8e-08 63.9 98 71.4
Lalb_Chr05g0222191 Lupinus albus HOM05D001103 ORTHO05D000954 2.3e-08 63.5 102 66.7
Medtr8g105350 Medicago truncatula HOM05D001103 ORTHO05D000954 2.3e-08 63.5 102 66.7
Peaxi162Scf00937g00328 Petunia axillaris HOM05D001103 ORTHO05D000954 2.3e-08 63.5 98 72.4
ATR0753G014 Amborella trichopoda HOM05D001103 ORTHO05D000954 3.0e-08 63.2 98 78.6
Prupe.7G032400 Prunus persica HOM05D001103 ORTHO05D000954 3.0e-08 63.2 99 70.7
A07p12410 Brassica napus HOM05D001103 ORTHO05D000954 3.9e-08 62.8 109 66.1
Cpa.g.sc2.189 Carica papaya HOM05D001103 ORTHO05D000954 3.9e-08 62.8 103 70.9
Cfa015026 Carpinus fangiana HOM05D001103 ORTHO05D000954 3.9e-08 62.8 115 65.2
Ca_17274_v3 Cicer arietinum L. HOM05D001103 ORTHO05D000954 3.9e-08 62.8 122 61.5
Lj6C737T13 Lonicera japonica HOM05D001103 ORTHO05D000954 3.9e-08 62.8 102 69.6
MBI13_g24901_MAGBIO Magnolia biondii HOM05D001103 ORTHO05D000954 3.9e-08 62.8 97 81.4
Mapoly0041s0116 Marchantia polymorpha HOM05D001103 ORTHO05D000954 3.9e-08 62.8 206 48.1
Nitab4.5_0000198g0150 Nicotiana tabacum HOM05D001103 ORTHO05D000954 3.9e-08 62.8 98 71.4
Nitab4.5_0011751g0010 Nicotiana tabacum HOM05D001103 ORTHO05D000954 3.9e-08 62.8 98 71.4
RcHm_v2.0_Chr4g0443021 Rosa chinensis HOM05D001103 ORTHO05D000954 3.9e-08 62.8 105 67.6
MSTRG.13628 Avicennia marina HOM05D001103 ORTHO05D000954 5.1e-08 62.4 98 72.4
Ciclev10014625m.g Citrus clementina HOM05D001103 ORTHO05D000954 5.1e-08 62.4 98 70.4
Glyma.05G239100 Glycine max HOM05D001103 ORTHO05D000954 5.1e-08 62.4 102 68.6
Hma1.2p1_0940F.1_g239560 Hydrangea macrophylla HOM05D001103 ORTHO05D000954 5.1e-08 62.4 98 70.4
MBI19_g44855_MAGBIO Magnolia biondii HOM05D001103 ORTHO05D000954 5.1e-08 62.4 98 69.4
TWI77G0007 Tripterygium wilfordii HOM05D001103 ORTHO05D000954 5.1e-08 62.4 98 69.4
CDE06G1332 Ceratophyllum demersum HOM05D001103 ORTHO05D000954 6.7e-08 62.0 95 70.5
Cc11_g07390 Coffea canephora HOM05D001103 ORTHO05D000954 6.7e-08 62.0 96 71.9
Oeu062638.1 Olea europaea HOM05D001103 ORTHO05D000954 6.7e-08 62.0 98 72.4
Prupe.1G333700 Prunus persica HOM05D001103 ORTHO05D000954 6.7e-08 62.0 105 68.6
QL03p036025 Quercus lobata HOM05D001103 ORTHO05D000954 6.7e-08 62.0 98 72.4
TPR.G16757 Trifolium pratense HOM05D001103 ORTHO05D000954 6.7e-08 62.0 102 75.5
GSVIVG01011656001 Vitis vinifera HOM05D001103 ORTHO05D000954 6.7e-08 62.0 98 70.4
A07p34560 Brassica napus HOM05D001103 ORTHO05D000954 8.7e-08 61.6 103 75.7
BraA07t29021Z Brassica rapa HOM05D001103 ORTHO05D000954 8.7e-08 61.6 105 67.6
Glyma.08G046200 Glycine max HOM05D001103 ORTHO05D000954 8.7e-08 61.6 102 66.7
Lj4g0011451 Lotus japonicus HOM05D001103 ORTHO05D000954 8.7e-08 61.6 102 65.7
TPR.G19251 Trifolium pratense HOM05D001103 ORTHO05D000954 8.7e-08 61.6 102 65.7
TAR374G0809 Trochodendron aralioides HOM05D001103 ORTHO05D000954 8.7e-08 61.6 96 69.8
Actinidia38439 Actinidia chinensis HOM05D001103 ORTHO05D000954 1.1e-07 61.2 99 66.7
EL10Ac6g14199 Beta vulgaris HOM05D001103 ORTHO05D000954 1.1e-07 61.2 99 70.7
A09p39030 Brassica napus HOM05D001103 ORTHO05D000954 1.1e-07 61.2 99 77.8
C06p41970 Brassica napus HOM05D001103 ORTHO05D000954 1.1e-07 61.2 103 75.7
BolC6t39232H Brassica oleracea HOM05D001103 ORTHO05D000954 1.1e-07 61.2 103 75.7
BraA09t39403Z Brassica rapa HOM05D001103 ORTHO05D000954 1.1e-07 61.2 99 77.8
Lalb_Chr04g0258681 Lupinus albus HOM05D001103 ORTHO05D000954 1.1e-07 61.2 101 67.3
Lalb_Chr17g0338431 Lupinus albus HOM05D001103 ORTHO05D000954 1.1e-07 61.2 102 66.7
PSO017G0044 Papaver somniferum HOM05D001103 ORTHO05D000954 1.1e-07 61.2 98 72.4
PSO478G2239 Papaver somniferum HOM05D001103 ORTHO05D000954 1.1e-07 61.2 98 72.4
Psat6g046640 Pisum sativum HOM05D001103 ORTHO05D000954 1.1e-07 61.2 102 67.6
Prupe.7G033200 Prunus persica HOM05D001103 ORTHO05D000954 1.1e-07 61.2 99 69.7
A08p26770 Brassica napus HOM05D001103 ORTHO05D000954 1.5e-07 60.8 101 76.2
BraA08t34622Z Brassica rapa HOM05D001103 ORTHO05D000954 1.5e-07 60.8 101 76.2
CSS0018064 Camellia sinensis var. sinensis HOM05D001103 ORTHO05D000954 1.5e-07 60.8 98 69.4
Ca_12545_v3 Cicer arietinum L. HOM05D001103 ORTHO05D000954 1.5e-07 60.8 102 76.5
ECA246G4154 Erigeron canadensis HOM05D001103 ORTHO05D000954 1.5e-07 60.8 98 77.6
THA.LOC104821905 Tarenaya hassleriana HOM05D001103 ORTHO05D000954 1.5e-07 60.8 99 77.8
Ah.03g137190 Amaranthus hybridus HOM05D001103 ORTHO05D000954 1.9e-07 60.5 99 73.7
CARHR026370 Cardamine hirsuta HOM05D001103 ORTHO05D000954 1.9e-07 60.5 106 72.6
CiPaw.06G052400 Carya illinoinensis HOM05D001103 ORTHO05D000954 1.9e-07 60.5 99 70.7
Sed0013639 Sechium edule HOM05D001103 ORTHO05D000954 1.9e-07 60.5 100 73.0
Sc14g0006570 Simmondsia chinensis HOM05D001103 ORTHO05D000954 1.9e-07 60.5 99 70.7
TPR.G36957 Trifolium pratense HOM05D001103 ORTHO05D000954 1.9e-07 60.5 102 66.7
BcaC05g26497 Brassica carinata HOM05D001103 ORTHO05D000954 2.5e-07 60.1 105 75.2
C05p25480 Brassica napus HOM05D001103 ORTHO05D000954 2.5e-07 60.1 105 75.2
FvH4_4g33511 Fragaria vesca HOM05D001103 ORTHO05D000954 2.5e-07 60.1 105 65.7
Lalb_Chr09g0330851 Lupinus albus HOM05D001103 ORTHO05D000954 2.5e-07 60.1 96 62.5
MD00G1075100 Malus domestica HOM05D001103 ORTHO05D000954 2.5e-07 60.1 105 63.8
Manes.15G134400 Manihot esculenta HOM05D001103 ORTHO05D000954 2.5e-07 60.1 102 74.5
Oeu031612.1 Olea europaea HOM05D001103 ORTHO05D000954 2.5e-07 60.1 98 79.6
BcaC08g46233 Brassica carinata HOM05D001103 ORTHO05D000954 3.3e-07 59.7 103 74.8
Lalb_Chr14g0365801 Lupinus albus HOM05D001103 ORTHO05D000954 3.3e-07 59.7 99 77.8
Medtr1g032520 Medicago truncatula HOM05D001103 ORTHO05D000954 3.3e-07 59.7 102 64.7
vmacro10696 Vaccinium macrocarpon HOM05D001103 ORTHO05D000954 3.3e-07 59.7 100 68.0
AUR62038491 Chenopodium quinoa HOM05D001103 ORTHO05D000954 4.3e-07 59.3 99 69.7
Haze_10871 Corylus avellana HOM05D001103 ORTHO05D000954 4.3e-07 59.3 224 44.6
Rhsim09G0089200 Rhododendron simsii HOM05D001103 ORTHO05D000954 4.3e-07 59.3 100 68.0
AT1G68060 Arabidopsis thaliana HOM05D001103 ORTHO05D000954 5.7e-07 58.9 109 71.6
A07p32180 Brassica napus HOM05D001103 ORTHO05D000954 5.7e-07 58.9 99 77.8
BolC5t31276H Brassica oleracea HOM05D001103 ORTHO05D000954 5.7e-07 58.9 105 75.2
BraA07t30848Z Brassica rapa HOM05D001103 ORTHO05D000954 5.7e-07 58.9 99 77.8
CAN.G74.16 Capsicum annuum HOM05D001103 ORTHO05D000954 5.7e-07 58.9 98 70.4
FAN12G2518 Fragaria x ananassa HOM05D001103 ORTHO05D006833 5.7e-07 58.9 99 67.7
FAN22G0254 Fragaria x ananassa HOM05D001103 ORTHO05D006833 5.7e-07 58.9 99 67.7
Manes.17G084100 Manihot esculenta HOM05D001103 ORTHO05D000954 5.7e-07 58.9 102 67.6
Potri.008G135100 Populus trichocarpa HOM05D001103 ORTHO05D000954 5.7e-07 58.9 98 68.4
Potri.010G106100 Populus trichocarpa HOM05D001103 ORTHO05D000954 5.7e-07 58.9 98 68.4
PGR102G0908 Punica granatum HOM05D001103 ORTHO05D000954 5.7e-07 58.9 99 67.7
Sabra08G0103000 Salix brachista HOM05D001103 ORTHO05D000954 5.7e-07 58.9 98 68.4
Eucgr.B02673 Eucalyptus grandis HOM05D001103 ORTHO05D000954 7.4e-07 58.5 98 77.6
FAN07G0112 Fragaria x ananassa HOM05D001103 ORTHO05D000954 7.4e-07 58.5 97 68.0
FAN17G1462 Fragaria x ananassa HOM05D001103 ORTHO05D000954 7.4e-07 58.5 97 68.0
Glyma.02G085500 Glycine max HOM05D001103 ORTHO05D000954 7.4e-07 58.5 101 67.3
MBI19_g36137_MAGBIO Magnolia biondii HOM05D001103 ORTHO05D000954 7.4e-07 58.5 99 76.8
SalBow2G1514 Salvia bowleyana HOM05D001103 ORTHO05D000954 7.4e-07 58.5 98 77.6
Aa31LG7G9340 Aethionema arabicum HOM05D001103 ORTHO05D000954 9.6e-07 58.2 215 47.9
BcaC08g46001 Brassica carinata HOM05D001103 ORTHO05D000954 9.6e-07 58.2 99 76.8
Hma1.2p1_0277F.1_g111650 Hydrangea macrophylla HOM05D001103 ORTHO05D000954 1.3e-06 57.8 102 68.6
Lalb_Chr16g0387511 Lupinus albus HOM05D001103 ORTHO05D000954 1.3e-06 57.8 96 68.8
TAR369G1089 Trochodendron aralioides HOM05D001103 ORTHO05D000954 1.3e-06 57.8 110 73.6
C06p37950 Brassica napus HOM05D001103 ORTHO05D000954 1.6e-06 57.4 99 75.8
CANSAT01G3129 Cannabis sativa HOM05D001103 ORTHO05D000954 1.6e-06 57.4 95 77.9
Medtr8g021120 Medicago truncatula HOM05D001103 ORTHO05D000954 1.6e-06 57.4 106 67.0
VMungo1215G2353 Vigna mungo HOM05D001103 ORTHO05D000954 1.6e-06 57.4 101 65.3
Ah.02g127890 Amaranthus hybridus HOM05D001103 ORTHO05D000954 2.1e-06 57.0 99 69.7
Cc06_g19380 Coffea canephora HOM05D001103 ORTHO05D000954 2.1e-06 57.0 100 73.0
CsaV3_5G015790 Cucumis sativus L. HOM05D001103 ORTHO05D000954 2.1e-06 57.0 99 69.7
DCAR_026804 Daucus carota HOM05D001103 ORTHO05D000954 2.1e-06 57.0 101 66.3
Migut.E00485 Erythranthe guttata HOM05D001103 ORTHO05D000954 2.1e-06 57.0 98 66.3
Hund24584 Selenicereus undatus HOM05D001103 ORTHO05D000954 2.1e-06 57.0 89 84.3
SEGI_32507 Sequoiadendron giganteum HOM05D001103 ORTHO05D000954 2.1e-06 57.0 99 78.8
Sopen01g001350 Solanum pennellii HOM05D001103 ORTHO05D000954 2.1e-06 57.0 212 43.4
SGA_v2.0_scaffold151G36785 Striga asiatica HOM05D001103 ORTHO05D000954 2.1e-06 57.0 93 72.0
Atru.chr1.1435 Acer truncatum HOM05D001103 ORTHO05D000954 2.8e-06 56.6 98 68.4
Aqoxy3G00025 Aquilegia oxysepala HOM05D001103 ORTHO05D000954 2.8e-06 56.6 98 69.4
BolC6t38894H Brassica oleracea HOM05D001103 ORTHO05D000954 2.8e-06 56.6 99 75.8
DCAR_007332 Daucus carota HOM05D001103 ORTHO05D000954 2.8e-06 56.6 102 73.5
Phvul.003G018100 Phaseolus vulgaris HOM05D001103 ORTHO05D000954 2.8e-06 56.6 101 69.3
SGA_v2.0_scaffold23G10198 Striga asiatica HOM05D001103 ORTHO05D000954 2.8e-06 56.6 109 66.1
HPP92_013122 Vanilla planifolia HOM05D001103 ORTHO05D000954 2.8e-06 56.6 105 74.3
Zm00001eb133890 Zea mays HOM05D001103 ORTHO05D000954 2.8e-06 56.6 96 68.8
Aqoxy1G00390 Aquilegia oxysepala HOM05D001103 ORTHO05D000954 3.7e-06 56.2 99 67.7
Aqoxy3G04070 Aquilegia oxysepala HOM05D001103 ORTHO05D000954 3.7e-06 56.2 98 68.4
CDE04G3473 Ceratophyllum demersum HOM05D001103 ORTHO05D000954 3.7e-06 56.2 95 66.3
Dinv06173 Davidia involucrata HOM05D001103 ORTHO05D000954 3.7e-06 56.2 99 37.4
Thecc.05G129700 Theobroma cacao HOM05D001103 ORTHO05D000954 3.7e-06 56.2 99 78.8
TAR629G0434 Trochodendron aralioides HOM05D001103 ORTHO05D000954 3.7e-06 56.2 98 76.5
ECA233G3874 Erigeron canadensis HOM05D001103 ORTHO05D000954 4.8e-06 55.8 96 68.8
Psat7g007800 Pisum sativum HOM05D001103 ORTHO05D000954 4.8e-06 55.8 102 62.7
SMO364G0775 Selaginella moellendorffii HOM05D001103 ORTHO05D000954 4.8e-06 55.8 101 71.3
HPP92_002296 Vanilla planifolia HOM05D001103 ORTHO05D000954 4.8e-06 55.8 98 76.5
COL.COLO4_37448 Corchorus olitorius HOM05D001103 ORTHO05D000954 6.3e-06 55.5 96 76.0
ECA234G0551 Erigeron canadensis HOM05D001103 ORTHO05D000954 6.3e-06 55.5 216 44.0
Manes.08G060700 Manihot esculenta HOM05D001103 ORTHO05D000954 6.3e-06 55.5 32 81.2
unitig_699.g19541 Utricularia gibba HOM05D001103 ORTHO05D000954 6.3e-06 55.5 99 77.8
Aa31LG7G9360 Aethionema arabicum HOM05D001103 ORTHO05D000954 8.2e-06 55.1 215 47.4
AagrBONN_evm.TU.Sc2ySwM_340.162 Anthoceros agrestis HOM05D001103 ORTHO05D000954 8.2e-06 55.1 145 35.9
DCAR_023575 Daucus carota HOM05D001103 ORTHO05D000954 8.2e-06 55.1 103 66.0
Gohir.D04G186300 Gossypium hirsutum HOM05D001103 ORTHO05D000954 8.2e-06 55.1 91 73.6
Gorai.012G182700 Gossypium raimondii HOM05D001103 ORTHO05D000954 8.2e-06 55.1 91 73.6
HanXRQChr12g0364961 Helianthus annuus HOM05D001103 ORTHO05D000954 8.2e-06 55.1 96 76.0
QL07p011005 Quercus lobata HOM05D001103 ORTHO05D000954 8.2e-06 55.1 110 46.4
PGSC0003DMG400019974 Solanum tuberosum HOM05D001103 ORTHO05D000954 8.2e-06 55.1 212 46.2
TAR371G0083 Trochodendron aralioides HOM05D001103 ORTHO05D000954 8.2e-06 55.1 96 62.5


User provided reference genes

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