Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c18_21380 Physcomitrium patens HOM05D012897 ORTHO05D014794 0.0e+00 1222.6 612 100.0
Pp3c21_1210 Physcomitrium patens HOM05D012897 ORTHO05D014794 2.1e-184 649.8 592 62.0
Pp3c19_5900 Physcomitrium patens HOM05D012897 ORTHO05D014794 2.2e-146 523.5 599 51.9
Pp3c11_2350 Physcomitrium patens HOM05D012897 ORTHO05D014794 1.1e-97 361.7 590 43.2
Pp3c7_24100 Physcomitrium patens HOM05D012897 ORTHO05D014794 1.4e-95 354.8 576 43.6
Pp3c4_13250 Physcomitrium patens HOM05D012897 ORTHO05D014794 3.7e-77 293.5 509 42.8
Mapoly0013s0172 Marchantia polymorpha HOM05D012897 ORTHO05D014794 5.6e-65 253.1 261 53.3
AagrBONN_evm.TU.Sc2ySwM_344.2110 Anthoceros agrestis HOM05D012897 ORTHO05D014794 1.3e-58 231.9 300 45.3
Pp3c9_15270 Physcomitrium patens HOM05D012897 ORTHO05D014794 1.5e-57 228.4 188 59.0
ATR1096G154 Amborella trichopoda HOM05D012897 ORTHO05D014794 2.1e-56 224.6 183 59.0
CBR_g46910 Chara braunii HOM05D012897 ORTHO05D014794 1.2e-51 208.8 184 55.4
Nn7g36802 Nelumbo nucifera HOM05D012897 ORTHO05D014794 2.1e-48 198.0 219 47.9
SEGI_32318 Sequoiadendron giganteum HOM05D012897 ORTHO05D014794 1.6e-35 155.2 125 57.6
DCAR_023681 Daucus carota HOM05D000752 ORTHO05D000572 5.3e-07 60.5 272 27.6
Lsat_1_v5_gn_4_19960 Lactuca sativa HOM05D000752 ORTHO05D000572 9.1e-07 59.7 169 32.0
Manes.06G071600 Manihot esculenta HOM05D000752 ORTHO05D000572 1.2e-06 59.3 172 31.4
TAR278G0001 Trochodendron aralioides HOM05D000752 ORTHO05D000572 1.2e-06 59.3 169 31.4
TAR371G0307 Trochodendron aralioides HOM05D000752 ORTHO05D000572 1.2e-06 59.3 169 31.4
Aqoxy3G00368 Aquilegia oxysepala HOM05D000752 ORTHO05D000572 2.0e-06 58.5 169 31.4
CSS0032263 Camellia sinensis var. sinensis HOM05D000752 ORTHO05D000572 2.0e-06 58.5 183 31.1
Potri.010G129000 Populus trichocarpa HOM05D000752 ORTHO05D000572 2.0e-06 58.5 170 33.5
Thecc.02G360100 Theobroma cacao HOM05D000752 ORTHO05D000572 2.0e-06 58.5 169 31.4
CAN.G1982.4 Capsicum annuum HOM05D000752 ORTHO05D000572 2.6e-06 58.2 170 31.2
Nn3g17756 Nelumbo nucifera HOM05D000752 ORTHO05D000572 2.6e-06 58.2 169 31.4
Actinidia27512 Actinidia chinensis HOM05D000752 ORTHO05D000572 3.5e-06 57.8 184 30.4
SalBow8G1476 Salvia bowleyana HOM05D000752 ORTHO05D000572 3.5e-06 57.8 169 30.8
Prupe.1G306200 Prunus persica HOM05D000752 ORTHO05D000572 4.5e-06 57.4 169 30.8
QL01p045033 Quercus lobata HOM05D000752 ORTHO05D000572 4.5e-06 57.4 169 30.8
MD16G1047400 Malus domestica HOM05D000752 ORTHO05D000572 5.9e-06 57.0 169 30.8
Ciclev10033535m.g Citrus clementina HOM05D000752 ORTHO05D000572 7.7e-06 56.6 169 30.8
Solyc05g009770.3 Solanum lycopersicum HOM05D000752 ORTHO05D000572 7.7e-06 56.6 172 30.8
TWI75G1434 Tripterygium wilfordii HOM05D000752 ORTHO05D000572 7.7e-06 56.6 169 30.8
GSVIVG01011943001 Vitis vinifera HOM05D000752 ORTHO05D000572 7.7e-06 56.6 169 30.8


User provided reference genes

Program Settings