Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c18_1570 Physcomitrium patens HOM05D005963 ORTHO05D006869 1.9e-250 868.6 419 100.0
Pp3c26_6160 Physcomitrium patens HOM05D005963 ORTHO05D006869 1.9e-242 842.0 419 97.1
Pp3c26_6250 Physcomitrium patens HOM05D005963 ORTHO05D006869 1.9e-242 842.0 419 97.1
Pp3c2_90 Physcomitrium patens HOM05D005963 ORTHO05D006869 2.4e-240 835.1 419 96.4
Pp3c26_6220 Physcomitrium patens HOM05D005963 ORTHO05D006869 1.4e-107 394.0 313 65.8
SMO174G0009 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 5.7e-61 239.2 428 37.1
SMO276G0013 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 8.6e-49 198.7 310 41.3
SEGI_31852 Sequoiadendron giganteum HOM05D005963 ORTHO05D006869 1.1e-48 198.4 355 35.5
Dinv28513 Davidia involucrata HOM05D005963 ORTHO05D006869 1.8e-46 191.0 364 36.3
DCAR_018136 Daucus carota HOM05D005963 ORTHO05D006869 1.5e-45 188.0 377 34.5
Gorai.008G282200 Gossypium raimondii HOM05D005963 ORTHO05D006869 4.4e-45 186.4 375 33.9
CSS0028871 Camellia sinensis var. sinensis HOM05D005963 ORTHO05D006869 7.5e-45 185.7 392 32.4
Gohir.A12G262600 Gossypium hirsutum HOM05D005963 ORTHO05D006869 7.5e-45 185.7 390 33.3
Actinidia13537 Actinidia chinensis HOM05D005963 ORTHO05D006869 1.3e-44 184.9 395 33.4
Gohir.D12G263300 Gossypium hirsutum HOM05D005963 ORTHO05D006869 1.3e-44 184.9 375 33.6
vmacro22547 Vaccinium macrocarpon HOM05D005963 ORTHO05D006869 1.3e-44 184.9 378 33.6
MD00G1003400 Malus domestica HOM05D005963 ORTHO05D006869 1.7e-44 184.5 382 33.2
Rhsim03G0174100 Rhododendron simsii HOM05D005963 ORTHO05D006869 1.7e-44 184.5 380 31.8
Aqoxy7G00515 Aquilegia oxysepala HOM05D005963 ORTHO05D006869 3.7e-44 183.3 371 32.9
Oeu030146.1 Olea europaea HOM05D005963 ORTHO05D006869 3.7e-44 183.3 386 33.2
Oeu030148.1 Olea europaea HOM05D005963 ORTHO05D006869 3.7e-44 183.3 386 33.2
Peaxi162Scf00192g00613 Petunia axillaris HOM05D005963 ORTHO05D006869 3.7e-44 183.3 376 35.4
FAN01G2646 Fragaria x ananassa HOM05D005963 ORTHO05D006869 4.9e-44 183.0 385 33.5
Actinidia25056 Actinidia chinensis HOM05D005963 ORTHO05D006869 1.1e-43 181.8 375 33.9
Nitab4.5_0000371g0030 Nicotiana tabacum HOM05D005963 ORTHO05D006869 1.1e-43 181.8 401 33.4
Nitab4.5_0000124g0020 Nicotiana tabacum HOM05D005963 ORTHO05D006869 1.4e-43 181.4 401 33.4
FAN06G2356 Fragaria x ananassa HOM05D005963 ORTHO05D006869 1.9e-43 181.0 385 33.2
FAN06G4856 Fragaria x ananassa HOM05D005963 ORTHO05D006869 1.9e-43 181.0 385 33.2
Glyma.09G149700 Glycine max HOM05D005963 ORTHO05D006869 1.9e-43 181.0 400 33.0
Dinv35132 Davidia involucrata HOM05D005963 ORTHO05D006869 2.4e-43 180.6 374 33.2
Haze_13797 Corylus avellana HOM05D005963 ORTHO05D006869 3.2e-43 180.3 377 31.6
Cc02_g03640 Coffea canephora HOM05D005963 ORTHO05D006869 4.1e-43 179.9 375 32.5
CiPaw.03G099400 Carya illinoinensis HOM05D005963 ORTHO05D006869 5.4e-43 179.5 375 33.3
FAN03G0518 Fragaria x ananassa HOM05D005963 ORTHO05D006869 5.4e-43 179.5 385 31.9
GSVIVG01018456001 Vitis vinifera HOM05D005963 ORTHO05D006869 5.4e-43 179.5 374 32.9
PGR142G0011 Punica granatum HOM05D005963 ORTHO05D006869 1.2e-42 178.3 397 31.2
FvH4_7g28640 Fragaria vesca HOM05D005963 ORTHO05D006869 1.6e-42 177.9 385 33.0
Potri.012G132300 Populus trichocarpa HOM05D005963 ORTHO05D006869 1.6e-42 177.9 405 32.1
Sp6g14050 Schrenkiella parvula HOM05D005963 ORTHO05D006869 2.1e-42 177.6 416 30.5
Phvul.004G124000 Phaseolus vulgaris HOM05D005963 ORTHO05D006869 3.5e-42 176.8 374 34.0
TWI14G0479 Tripterygium wilfordii HOM05D005963 ORTHO05D006869 3.5e-42 176.8 381 33.3
VMungo0464G1720 Vigna mungo HOM05D005963 ORTHO05D006869 4.6e-42 176.4 378 33.6
RcHm_v2.0_Chr1g0376121 Rosa chinensis HOM05D005963 ORTHO05D006869 6.0e-42 176.0 386 32.4
Sabra12G0099600 Salix brachista HOM05D005963 ORTHO05D006869 6.0e-42 176.0 407 32.4
Hma1.2p1_0488F.1_g163860 Hydrangea macrophylla HOM05D005963 ORTHO05D006869 7.8e-42 175.6 374 32.4
ATR0661G117 Amborella trichopoda HOM05D005963 ORTHO05D006869 1.0e-41 175.3 375 32.8
ECA232G0907 Erigeron canadensis HOM05D005963 ORTHO05D006869 1.0e-41 175.3 387 32.8
C02p20220 Brassica napus HOM05D005963 ORTHO05D006869 1.7e-41 174.5 388 30.9
HanXRQChr14g0433491 Helianthus annuus HOM05D005963 ORTHO05D006869 1.7e-41 174.5 389 32.6
AL8G26090 Arabidopsis lyrata HOM05D005963 ORTHO05D006869 2.3e-41 174.1 380 31.3
Carub.0008s1182 Capsella rubella HOM05D005963 ORTHO05D006869 2.3e-41 174.1 424 30.0
MD01G1192000 Malus domestica HOM05D005963 ORTHO05D006869 2.3e-41 174.1 382 31.9
Aa31LG3G8240 Aethionema arabicum HOM05D005963 ORTHO05D006869 3.0e-41 173.7 379 33.2
BolC2t08150H Brassica oleracea HOM05D005963 ORTHO05D006869 3.0e-41 173.7 388 30.9
CARHR264680 Cardamine hirsuta HOM05D005963 ORTHO05D006869 3.0e-41 173.7 373 32.4
Duzib205G1443 Durio zibethinus HOM05D005963 ORTHO05D006869 3.0e-41 173.7 375 34.4
SMO358G0565 Selaginella moellendorffii HOM05D001046 ORTHO05D007174 3.9e-41 173.3 424 30.9
Manes.06G140900 Manihot esculenta HOM05D005963 ORTHO05D006869 5.0e-41 172.9 378 34.4
Cpa.g.sc4.183 Carica papaya HOM05D005963 ORTHO05D006869 6.6e-41 172.6 375 32.3
CAN.G1257.1 Capsicum annuum HOM05D005963 ORTHO05D006869 8.6e-41 172.2 377 33.7
Lj2g0022710 Lotus japonicus HOM05D005963 ORTHO05D006869 8.6e-41 172.2 389 32.9
HanXRQChr15g0486261 Helianthus annuus HOM05D005963 ORTHO05D006869 1.1e-40 171.8 392 32.9
Solyc03g006900.2 Solanum lycopersicum HOM05D005963 ORTHO05D006869 1.1e-40 171.8 375 33.3
A10p09630 Brassica napus HOM05D005963 ORTHO05D006869 1.5e-40 171.4 392 30.6
BraA10t43044Z Brassica rapa HOM05D005963 ORTHO05D006869 1.5e-40 171.4 392 30.6
SHI13839 Sapria himalayana HOM05D005963 ORTHO05D006869 1.5e-40 171.4 376 32.4
CiPaw.04G064800 Carya illinoinensis HOM05D005963 ORTHO05D006869 2.5e-40 170.6 390 32.3
Sed0018627 Sechium edule HOM05D005963 ORTHO05D006869 2.5e-40 170.6 374 32.6
PGSC0003DMG400007557 Solanum tuberosum HOM05D005963 ORTHO05D006869 2.5e-40 170.6 376 33.5
BolC9t56999H Brassica oleracea HOM05D005963 ORTHO05D006869 3.3e-40 170.2 392 30.4
PSO478G0110 Papaver somniferum HOM05D005963 ORTHO05D006869 3.3e-40 170.2 372 32.5
Ciclev10004233m.g Citrus clementina HOM05D005963 ORTHO05D006869 4.3e-40 169.9 388 32.7
Lsat_1_v5_gn_9_53261 Lactuca sativa HOM05D005963 ORTHO05D006869 4.3e-40 169.9 390 31.5
A02p12120 Brassica napus HOM05D005963 ORTHO05D006869 7.3e-40 169.1 387 31.5
QL12p038851 Quercus lobata HOM05D005963 ORTHO05D006869 7.3e-40 169.1 389 31.9
MELO3C006856.2 Cucumis melo HOM05D005963 ORTHO05D006869 9.5e-40 168.7 394 31.5
Sopen03g002900 Solanum pennellii HOM05D005963 ORTHO05D006869 9.5e-40 168.7 374 33.2
Thhalv10015853m.g Eutrema salsugineum HOM05D005963 ORTHO05D006869 1.2e-39 168.3 367 30.0
Sc25g0000220 Simmondsia chinensis HOM05D005963 ORTHO05D006869 1.2e-39 168.3 405 31.4
BraA02t06276Z Brassica rapa HOM05D005963 ORTHO05D006869 1.6e-39 167.9 387 31.3
Prupe.2G286400 Prunus persica HOM05D005963 ORTHO05D006869 1.6e-39 167.9 377 31.8
Thecc.03G166100 Theobroma cacao HOM05D005963 ORTHO05D006869 1.6e-39 167.9 375 33.1
Duzib068G1175 Durio zibethinus HOM05D005963 ORTHO05D006869 2.1e-39 167.5 374 33.4
TAR374G1343 Trochodendron aralioides HOM05D005963 ORTHO05D006869 2.8e-39 167.2 370 32.7
arahy.Tifrunner.gnm1.ann1.R4K09I Arachis hypogaea HOM05D005963 ORTHO05D006869 4.7e-39 166.4 382 31.7
AUR62016071 Chenopodium quinoa HOM05D005963 ORTHO05D006869 4.7e-39 166.4 375 30.7
ClCG05G007670 Citrullus lanatus HOM05D005963 ORTHO05D006869 4.7e-39 166.4 385 30.9
COL.COLO4_14220 Corchorus olitorius HOM05D005963 ORTHO05D006869 4.7e-39 166.4 375 32.8
Eucgr.K00183 Eucalyptus grandis HOM05D005963 ORTHO05D006869 4.7e-39 166.4 404 31.7
Psat1g106960 Pisum sativum HOM05D005963 ORTHO05D006869 6.2e-39 166.0 381 31.8
TPR.G26590 Trifolium pratense HOM05D005963 ORTHO05D006869 6.2e-39 166.0 380 32.1
Lalb_Chr19g0131211 Lupinus albus HOM05D005963 ORTHO05D006869 1.1e-38 165.2 366 32.2
Gohir.A07G040200 Gossypium hirsutum HOM05D005963 ORTHO05D006869 1.4e-38 164.9 376 32.7
Medtr0007s0220 Medicago truncatula HOM05D005963 ORTHO05D006869 1.4e-38 164.9 382 33.2
PSO782G2761 Papaver somniferum HOM05D005963 ORTHO05D006869 1.4e-38 164.9 372 32.0
arahy.Tifrunner.gnm1.ann1.G2RQNR Arachis hypogaea HOM05D005963 ORTHO05D006869 1.8e-38 164.5 379 31.7
Gorai.001G047400 Gossypium raimondii HOM05D005963 ORTHO05D006869 3.1e-38 163.7 376 32.4
CsaV3_3G016590 Cucumis sativus L. HOM05D005963 ORTHO05D006869 4.0e-38 163.3 387 30.7
Nn6g34339 Nelumbo nucifera HOM05D005963 ORTHO05D006869 4.0e-38 163.3 376 33.5
THA.LOC104825083 Tarenaya hassleriana HOM05D005963 ORTHO05D006869 5.2e-38 162.9 403 30.8
BcaB08g35527 Brassica carinata HOM05D005963 ORTHO05D006869 6.8e-38 162.5 327 33.0
Gohir.D07G044301 Gossypium hirsutum HOM05D005963 ORTHO05D006869 8.9e-38 162.2 376 32.2
AT5G51800 Arabidopsis thaliana HOM05D005963 ORTHO05D006869 4.4e-37 159.8 376 29.8
EL10Ac3g05753 Beta vulgaris HOM05D005963 ORTHO05D006869 7.5e-37 159.1 387 30.5
Hund04676 Selenicereus undatus HOM05D005963 ORTHO05D006869 2.9e-36 157.1 387 31.3
BcaC04g20635 Brassica carinata HOM05D005963 ORTHO05D006869 4.9e-36 156.4 328 32.3
EL10Ac7g16401 Beta vulgaris HOM05D005963 ORTHO05D006869 1.9e-35 154.5 383 30.5
BcaC03g14575 Brassica carinata HOM05D005963 ORTHO05D006869 2.1e-34 151.0 356 30.6
CDE08G0260 Ceratophyllum demersum HOM05D005963 ORTHO05D006869 4.6e-34 149.8 362 31.5
AUR62021279 Chenopodium quinoa HOM05D005963 ORTHO05D006869 6.0e-34 149.4 379 30.3
Ah.13g067680 Amaranthus hybridus HOM05D005963 ORTHO05D006869 7.8e-34 149.1 400 30.0
Lj8C34G2 Lonicera japonica HOM05D005963 ORTHO05D006869 1.0e-33 148.7 352 33.8
FAN10G3242 Fragaria x ananassa HOM05D005963 ORTHO05D006869 4.7e-31 139.8 383 29.5
SMO268G0015 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 1.7e-28 131.3 375 28.8
FAN03G0902 Fragaria x ananassa HOM05D005963 ORTHO05D006869 4.6e-26 123.2 311 30.2
SMO195G0003 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 3.3e-24 117.1 401 28.2
Atru.chr1.580 Acer truncatum HOM05D005963 ORTHO05D006869 1.1e-16 92.0 238 30.3
Pp3c13_23360 Physcomitrium patens HOM05D020320 ORTHO05D006869 1.1e-14 85.5 65 63.1
Ca_05417_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 2.4e-14 84.3 107 42.1
PGSC0003DMG400007558 Solanum tuberosum HOM05D005963 ORTHO05D006869 9.9e-13 79.0 293 24.9
MBI05_g12587_MAGBIO Magnolia biondii HOM05D005963 ORTHO05D006869 4.2e-11 73.6 151 35.1
Ca_30119_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 4.6e-10 70.1 84 45.2
SMO116G0125 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 1.0e-09 68.9 293 24.9
SMO195G0004 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 2.3e-09 67.8 143 30.8
SMO195G0033 Selaginella moellendorffii HOM05D025148 ORTHO05D378758 1.4e-06 58.5 133 34.6


User provided reference genes

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