Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 9.0e-96 353.6 180 100.0
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 1.8e-27 126.7 113 55.8
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 2.6e-26 122.9 116 52.6
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 1.7e-25 120.2 127 51.2
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 4.9e-25 118.6 119 52.1
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 6.3e-25 118.2 119 52.1
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 8.3e-25 117.9 145 45.5
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 8.3e-25 117.9 145 45.5
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 8.3e-25 117.9 145 45.5
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 1.8e-24 116.7 146 41.8
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 7.0e-24 114.8 123 49.6
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 1.6e-23 113.6 123 48.8
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 4.5e-23 112.1 124 47.6
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 1.3e-22 110.5 119 48.7
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 1.3e-22 110.5 120 50.8
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 1.3e-22 110.5 123 46.3
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 2.3e-22 109.8 150 41.3
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 2.3e-22 109.8 131 47.3
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 2.9e-22 109.4 120 47.5
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 2.9e-22 109.4 120 47.5
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 2.9e-22 109.4 125 45.6
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 3.8e-22 109.0 119 47.1
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 6.6e-22 108.2 119 47.1
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 6.6e-22 108.2 114 48.2
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 6.6e-22 108.2 131 44.3
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 8.6e-22 107.8 125 47.2
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 8.6e-22 107.8 114 50.0
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.1e-21 107.5 131 43.5
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 1.5e-21 107.1 159 42.1
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 1.5e-21 107.1 159 42.1
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 1.5e-21 107.1 159 42.1
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 1.9e-21 106.7 120 50.8
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 1.9e-21 106.7 148 44.6
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 2.5e-21 106.3 159 42.1
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 2.5e-21 106.3 159 42.1
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 2.5e-21 106.3 120 47.5
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 2.5e-21 106.3 130 47.7
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 3.3e-21 105.9 119 46.2
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 3.3e-21 105.9 132 42.4
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 4.3e-21 105.5 119 47.9
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 4.3e-21 105.5 116 47.4
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 5.6e-21 105.1 120 50.8
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 5.6e-21 105.1 105 50.5
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 7.3e-21 104.8 120 47.5
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 9.5e-21 104.4 121 43.8
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 9.5e-21 104.4 121 47.1
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 9.5e-21 104.4 120 46.7
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 1.6e-20 103.6 121 43.8
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 1.6e-20 103.6 119 47.1
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 1.6e-20 103.6 115 47.8
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 1.6e-20 103.6 127 44.9
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 2.1e-20 103.2 123 43.9
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 2.1e-20 103.2 165 40.0
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 2.1e-20 103.2 119 47.1
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 2.8e-20 102.8 119 46.2
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 2.8e-20 102.8 122 45.9
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 2.8e-20 102.8 121 47.9
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 2.8e-20 102.8 121 47.1
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 3.6e-20 102.4 126 45.2
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 4.7e-20 102.1 124 47.6
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 4.7e-20 102.1 119 46.2
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 4.7e-20 102.1 117 47.9
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 6.1e-20 101.7 97 50.5
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 8.0e-20 101.3 123 44.7
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 8.0e-20 101.3 115 46.1
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 8.0e-20 101.3 107 53.3
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 1.0e-19 100.9 105 50.5
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 1.4e-19 100.5 111 48.6
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 1.8e-19 100.1 89 52.8
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 1.8e-19 100.1 147 40.1
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 4.0e-19 99.0 144 41.7
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 5.2e-19 98.6 127 41.7
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 6.8e-19 98.2 121 44.6
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 8.9e-19 97.8 115 44.3
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 1.2e-18 97.4 115 44.3
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 2.0e-18 96.7 118 45.8
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 2.0e-18 96.7 95 47.4
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 1.3e-17 94.0 114 47.4
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 1.7e-17 93.6 120 43.3
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 2.2e-17 93.2 152 38.8
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 2.2e-17 93.2 114 44.7
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 2.9e-17 92.8 125 44.0
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 3.7e-17 92.4 121 46.3
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 1.4e-16 90.5 123 39.8
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 2.4e-16 89.7 70 54.3
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 4.1e-16 89.0 127 42.5
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 5.4e-16 88.6 122 43.4
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 6.6e-14 81.6 118 40.7
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 1.5e-13 80.5 104 44.2
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 7.3e-13 78.2 79 48.1
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 7.3e-13 78.2 97 44.3
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 4.7e-12 75.5 105 39.0
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 6.2e-12 75.1 103 45.6
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 2.3e-11 73.2 96 43.8
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 5.2e-11 72.0 88 46.6
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 6.8e-11 71.6 135 34.8
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 5.8e-10 68.6 53 58.5
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 2.2e-09 66.6 93 45.2
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 3.7e-09 65.9 46 63.0
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 1.2e-07 60.8 155 31.0
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 2.0e-07 60.1 85 38.8
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 6.6e-06 55.1 63 42.9


User provided reference genes

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