Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c17_9600 Physcomitrium patens HOM05D000108 ORTHO05D002946 4.2e-30 134.0 68 100.0
Pp3c26_7180 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.6e-11 71.6 56 67.9
Potri.015G146000 Populus trichocarpa HOM05D000108 ORTHO05D002946 2.9e-07 58.2 45 66.7
TPR.G8162 Trifolium pratense HOM05D000108 ORTHO05D002946 1.5e-06 55.8 47 61.7
TWI14G1102 Tripterygium wilfordii HOM05D000108 ORTHO05D002946 2.5e-06 55.1 46 63.0
Zm00001eb351300 Zea mays HOM05D000108 ORTHO05D002946 2.5e-06 55.1 47 61.7
AUR62003419 Chenopodium quinoa HOM05D000108 ORTHO05D002946 3.3e-06 54.7 46 63.0
HPP92_025772 Vanilla planifolia HOM05D054546 ORTHO05D002946 3.3e-06 54.7 46 63.0
Cpa.g.sc107.73 Carica papaya HOM05D000108 ORTHO05D002946 4.2e-06 54.3 46 63.0
Hund04767 Selenicereus undatus HOM05D000108 ORTHO05D002946 4.2e-06 54.3 46 60.9
THA.LOC104816272 Tarenaya hassleriana HOM05D000108 ORTHO05D002946 4.2e-06 54.3 53 62.3
AUR62029422 Chenopodium quinoa HOM05D000108 ORTHO05D002946 5.5e-06 53.9 46 60.9
Glyma.09G136400 Glycine max HOM05D000108 ORTHO05D002946 5.5e-06 53.9 46 63.0
Hma1.2p1_0227F.1_g095860 Hydrangea macrophylla HOM05D000108 ORTHO05D002946 5.5e-06 53.9 46 63.0
Nitab4.5_0004439g0060 Nicotiana tabacum HOM05D000108 ORTHO05D002946 5.5e-06 53.9 46 56.5
Peaxi162Scf00444g00429 Petunia axillaris HOM05D000108 ORTHO05D002946 5.5e-06 53.9 46 58.7
Sopen03g004310 Solanum pennellii HOM05D000108 ORTHO05D002946 5.5e-06 53.9 46 58.7
ATR0680G037 Amborella trichopoda HOM05D000108 ORTHO05D002946 7.2e-06 53.5 46 63.0
Duzib068G1445 Durio zibethinus HOM05D000108 ORTHO05D002946 7.2e-06 53.5 46 63.0
Duzib205G0664 Durio zibethinus HOM05D000108 ORTHO05D002946 7.2e-06 53.5 46 63.0
Glyma.16G181900 Glycine max HOM05D000108 ORTHO05D002946 7.2e-06 53.5 46 63.0
Gohir.A12G256300 Gossypium hirsutum HOM05D000108 ORTHO05D002946 7.2e-06 53.5 46 63.0
Gohir.D12G257600 Gossypium hirsutum HOM05D000108 ORTHO05D002946 7.2e-06 53.5 46 63.0
Gorai.008G275900 Gossypium raimondii HOM05D000108 ORTHO05D002946 7.2e-06 53.5 46 63.0
Lju891C3T6 Lonicera japonica HOM05D000108 ORTHO05D002946 7.2e-06 53.5 46 63.0
MBI14_g20105_MAGBIO Magnolia biondii HOM05D000108 ORTHO05D002946 7.2e-06 53.5 46 63.0
Medtr6g053680 Medicago truncatula HOM05D000108 ORTHO05D002946 7.2e-06 53.5 45 62.2
PGR004G0291 Punica granatum HOM05D000108 ORTHO05D002946 7.2e-06 53.5 46 67.4
Solyc03g025470.4 Solanum lycopersicum HOM05D000108 ORTHO05D002946 7.2e-06 53.5 46 58.7
PGSC0003DMG400015789 Solanum tuberosum HOM05D000108 ORTHO05D002946 7.2e-06 53.5 46 58.7
Thecc.03G179700 Theobroma cacao HOM05D000108 ORTHO05D002946 7.2e-06 53.5 46 63.0
EL10Ac3g05603 Beta vulgaris HOM05D000108 ORTHO05D002946 9.5e-06 53.1 46 63.0
PGR142G1655 Punica granatum HOM05D000108 ORTHO05D002946 9.5e-06 53.1 46 60.9
SMO118G0167 Selaginella moellendorffii HOM05D000108 ORTHO05D002946 9.5e-06 53.1 46 63.0
Sc06g0007170 Simmondsia chinensis HOM05D000108 ORTHO05D002946 9.5e-06 53.1 46 63.0


User provided reference genes

Program Settings