Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 1.2e-86 323.2 162 100.0
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 1.8e-15 86.7 92 42.4
CBR_g10976 Chara braunii HOM05D007659 ORTHO05D009227 4.1e-15 85.5 65 60.0
AagrBONN_evm.TU.Sc2ySwM_228.2308 Anthoceros agrestis HOM05D007659 ORTHO05D009227 1.2e-11 73.9 65 58.5
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 6.1e-11 71.6 91 41.8
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 2.3e-10 69.7 59 54.2
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 4.0e-10 68.9 56 55.4
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 4.0e-10 68.9 119 31.9
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 4.0e-10 68.9 57 52.6
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 5.2e-10 68.6 63 49.2
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 6.8e-10 68.2 89 38.2
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 6.8e-10 68.2 93 38.7
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 6.8e-10 68.2 76 47.4
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 8.8e-10 67.8 97 36.1
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 1.5e-09 67.0 114 35.1
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 1.5e-09 67.0 125 32.0
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 2.0e-09 66.6 56 50.0
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 3.4e-09 65.9 49 57.1
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 3.4e-09 65.9 93 37.6
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 3.4e-09 65.9 91 38.5
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 3.4e-09 65.9 60 48.3
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 3.4e-09 65.9 89 38.2
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 4.4e-09 65.5 94 36.2
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 4.4e-09 65.5 83 43.4
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 4.4e-09 65.5 58 50.0
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 5.7e-09 65.1 89 39.3
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 5.7e-09 65.1 83 39.8
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 7.5e-09 64.7 86 43.0
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 7.5e-09 64.7 54 51.9
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 9.8e-09 64.3 56 50.0
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 9.8e-09 64.3 58 50.0
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 1.3e-08 63.9 83 41.0
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 1.3e-08 63.9 56 48.2
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 1.7e-08 63.5 60 45.0
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 1.7e-08 63.5 52 55.8
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 1.7e-08 63.5 55 49.1
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 2.2e-08 63.2 83 41.0
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 2.2e-08 63.2 83 41.0
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 2.2e-08 63.2 54 51.9
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 2.2e-08 63.2 56 50.0
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 2.2e-08 63.2 86 33.7
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 2.8e-08 62.8 54 51.9
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 2.8e-08 62.8 45 60.0
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 2.8e-08 62.8 54 51.9
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 3.7e-08 62.4 83 41.0
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 3.7e-08 62.4 83 41.0
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 3.7e-08 62.4 59 49.2
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 3.7e-08 62.4 54 51.9
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 3.7e-08 62.4 60 46.7
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 3.7e-08 62.4 83 38.6
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 4.9e-08 62.0 43 62.8
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 4.9e-08 62.0 59 45.8
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 4.9e-08 62.0 100 35.0
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 6.3e-08 61.6 98 35.7
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 6.3e-08 61.6 98 35.7
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 6.3e-08 61.6 43 62.8
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 6.3e-08 61.6 54 51.9
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 6.3e-08 61.6 55 47.3
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 8.3e-08 61.2 43 60.5
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 8.3e-08 61.2 56 46.4
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 8.3e-08 61.2 75 38.7
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 8.3e-08 61.2 43 65.1
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 8.3e-08 61.2 55 47.3
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 8.3e-08 61.2 55 47.3
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 8.3e-08 61.2 98 39.8
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 1.1e-07 60.8 51 54.9
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 1.1e-07 60.8 52 50.0
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 1.1e-07 60.8 59 47.5
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 1.4e-07 60.5 43 60.5
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 1.4e-07 60.5 55 45.5
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 1.8e-07 60.1 75 38.7
THA.LOC104803555 Tarenaya hassleriana HOM05D007659 ORTHO05D009227 1.8e-07 60.1 43 60.5
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 2.4e-07 59.7 44 56.8
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 3.1e-07 59.3 55 47.3
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 3.1e-07 59.3 55 47.3
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 3.1e-07 59.3 95 34.7
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 3.1e-07 59.3 58 43.1
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 4.1e-07 58.9 65 44.6
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 4.1e-07 58.9 52 46.2
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 5.4e-07 58.5 43 58.1
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 5.4e-07 58.5 47 48.9
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 5.4e-07 58.5 54 46.3
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 7.0e-07 58.2 100 33.0
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 7.0e-07 58.2 50 52.0
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 9.2e-07 57.8 53 45.3
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 9.2e-07 57.8 53 45.3
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 1.2e-06 57.4 75 36.0
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 1.2e-06 57.4 77 37.7
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 1.6e-06 57.0 56 42.9
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 1.6e-06 57.0 98 34.7
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 2.0e-06 56.6 50 48.0
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 3.5e-06 55.8 54 42.6
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 7.7e-06 54.7 85 35.3


User provided reference genes

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