Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c17_6460 Physcomitrium patens HOM05D003732 ORTHO05D014000 3.4e-95 351.7 180 100.0
Pp3c1_29590 Physcomitrium patens HOM05D003732 ORTHO05D004965 1.3e-49 200.3 143 72.7
AagrBONN_evm.TU.Sc2ySwM_228.5018 Anthoceros agrestis HOM05D003732 ORTHO05D014000 8.5e-46 187.6 144 61.1
CDE07G2061 Ceratophyllum demersum HOM05D003732 ORTHO05D014000 2.0e-34 149.8 158 49.4
Dinv24812 Davidia involucrata HOM05D003732 ORTHO05D014000 2.0e-34 149.8 159 48.4
Aqoxy3G01103 Aquilegia oxysepala HOM05D003732 ORTHO05D014000 4.4e-34 148.7 155 49.7
Nn3g16769 Nelumbo nucifera HOM05D003732 ORTHO05D014000 4.4e-34 148.7 160 48.8
Haze_07546 Corylus avellana HOM05D003732 ORTHO05D014000 6.3e-33 144.8 158 47.5
HPP92_021842 Vanilla planifolia HOM05D003732 ORTHO05D014000 7.0e-32 141.4 191 42.9
Cfa019169 Carpinus fangiana HOM05D003732 ORTHO05D014000 1.2e-31 140.6 158 46.8
GSVIVG01007696001 Vitis vinifera HOM05D003732 ORTHO05D014000 1.6e-31 140.2 166 43.4
ATR1152G071 Amborella trichopoda HOM05D003732 ORTHO05D014000 2.3e-30 136.3 162 44.4
TAR374G1668 Trochodendron aralioides HOM05D003732 ORTHO05D014000 4.5e-23 112.1 133 45.9
C01p33680 Brassica napus HOM05D003732 ORTHO05D004965 1.2e-18 97.4 121 43.0
Phvul.L001386 Phaseolus vulgaris HOM05D003732 ORTHO05D004965 1.5e-18 97.1 161 35.4
Zm00001eb171040 Zea mays HOM05D003732 ORTHO05D004965 2.0e-18 96.7 117 42.7
Aa31LG4G14990 Aethionema arabicum HOM05D003732 ORTHO05D004965 2.6e-18 96.3 123 41.5
BcaC09g49713 Brassica carinata HOM05D003732 ORTHO05D004965 2.6e-18 96.3 121 42.1
A01p26450 Brassica napus HOM05D003732 ORTHO05D004965 2.6e-18 96.3 121 43.0
BolC1t03315H Brassica oleracea HOM05D003732 ORTHO05D004965 2.6e-18 96.3 121 43.0
BraA01t02569Z Brassica rapa HOM05D003732 ORTHO05D004965 2.6e-18 96.3 121 43.0
Nitab4.5_0004465g0010 Nicotiana tabacum HOM05D003732 ORTHO05D004965 4.4e-18 95.5 123 41.5
Psat5g281400 Pisum sativum HOM05D003732 ORTHO05D004965 5.7e-18 95.1 123 39.8
Haze_23969 Corylus avellana HOM05D003732 ORTHO05D004965 7.5e-18 94.7 123 39.0
Thhalv10002573m.g Eutrema salsugineum HOM05D003732 ORTHO05D004965 7.5e-18 94.7 123 39.8
Lsat_1_v5_gn_8_76381 Lactuca sativa HOM05D003732 ORTHO05D004965 7.5e-18 94.7 114 41.2
VMungo1080G0314 Vigna mungo HOM05D003732 ORTHO05D004965 7.5e-18 94.7 161 35.4
HanXRQChr05g0133971 Helianthus annuus HOM05D003732 ORTHO05D004965 9.8e-18 94.4 114 42.1
arahy.Tifrunner.gnm1.ann1.58CB50 Arachis hypogaea HOM05D003732 ORTHO05D004965 1.3e-17 94.0 133 37.6
CSS0019034 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 1.3e-17 94.0 125 38.4
Ca_01368_v3 Cicer arietinum L. HOM05D003732 ORTHO05D004965 1.3e-17 94.0 161 35.4
HanXRQChr06g0175491 Helianthus annuus HOM05D003732 ORTHO05D004965 1.7e-17 93.6 123 39.8
AT3G45770 Arabidopsis thaliana HOM05D003732 ORTHO05D004965 2.2e-17 93.2 123 39.8
Nitab4.5_0004465g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 2.2e-17 93.2 114 43.9
TPR.G11613 Trifolium pratense HOM05D003732 ORTHO05D004965 2.2e-17 93.2 161 34.8
AL5G24450 Arabidopsis lyrata HOM05D003732 ORTHO05D004965 2.9e-17 92.8 123 39.8
Carub.0005s1163 Capsella rubella HOM05D003732 ORTHO05D004965 2.9e-17 92.8 123 39.8
CAN.G84.24 Capsicum annuum HOM05D003732 ORTHO05D004965 2.9e-17 92.8 123 40.7
Duzib168G0288 Durio zibethinus HOM05D003732 ORTHO05D004965 2.9e-17 92.8 123 39.0
Glyma.13G330100 Glycine max HOM05D003732 ORTHO05D004965 2.9e-17 92.8 161 34.8
HanXRQChr05g0133981 Helianthus annuus HOM05D003732 ORTHO05D004965 2.9e-17 92.8 123 39.0
Sp5g15750 Schrenkiella parvula HOM05D003732 ORTHO05D004965 3.7e-17 92.4 123 40.7
SpUn0096_0020 Schrenkiella parvula HOM05D003732 ORTHO05D004965 3.7e-17 92.4 123 40.7
MELO3C026850.2 Cucumis melo HOM05D003732 ORTHO05D004965 4.9e-17 92.0 123 39.8
ECA236G0640 Erigeron canadensis HOM05D003732 ORTHO05D004965 4.9e-17 92.0 123 39.0
Manes.11G138400 Manihot esculenta HOM05D003732 ORTHO05D004965 4.9e-17 92.0 123 38.2
Medtr2g095840 Medicago truncatula HOM05D003732 ORTHO05D004965 4.9e-17 92.0 161 34.8
Gorai.003G139600 Gossypium raimondii HOM05D003732 ORTHO05D004965 6.4e-17 91.7 123 39.8
Lj3g0021313 Lotus japonicus HOM05D003732 ORTHO05D004965 6.4e-17 91.7 123 39.8
BcaB05g24098 Brassica carinata HOM05D003732 ORTHO05D004965 8.3e-17 91.3 121 40.5
CARHR149900 Cardamine hirsuta HOM05D003732 ORTHO05D004965 8.3e-17 91.3 123 39.0
Gohir.D03G132600 Gossypium hirsutum HOM05D003732 ORTHO05D004965 1.1e-16 90.9 123 39.8
Cfa011398 Carpinus fangiana HOM05D003732 ORTHO05D004965 1.4e-16 90.5 123 38.2
Oeu051855.1 Olea europaea HOM05D003732 ORTHO05D004965 1.4e-16 90.5 123 37.4
Potri.001G233300 Populus trichocarpa HOM05D003732 ORTHO05D004965 1.4e-16 90.5 123 37.4
Sopen12g032610 Solanum pennellii HOM05D003732 ORTHO05D004965 1.4e-16 90.5 123 39.0
COL.COLO4_18395 Corchorus olitorius HOM05D003732 ORTHO05D004965 1.8e-16 90.1 123 39.0
CsaV3_1G012760 Cucumis sativus L. HOM05D003732 ORTHO05D004965 1.8e-16 90.1 123 38.2
Peaxi162Scf00616g00312 Petunia axillaris HOM05D003732 ORTHO05D004965 1.8e-16 90.1 123 37.4
TAR633G0632 Trochodendron aralioides HOM05D003732 ORTHO05D004965 1.8e-16 90.1 124 37.9
arahy.Tifrunner.gnm1.ann1.B493EM Arachis hypogaea HOM05D003732 ORTHO05D004965 2.4e-16 89.7 154 33.8
Migut.D02165 Erythranthe guttata HOM05D003732 ORTHO05D004965 2.4e-16 89.7 123 38.2
SalBow3G0013 Salvia bowleyana HOM05D003732 ORTHO05D004965 2.4e-16 89.7 123 38.2
GSVIVG01025089001 Vitis vinifera HOM05D003732 ORTHO05D004965 3.2e-16 89.4 120 39.2
Atru.chr3.3750 Acer truncatum HOM05D003732 ORTHO05D004965 4.1e-16 89.0 123 37.4
CSS0010801 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 4.1e-16 89.0 125 36.0
CSS0050219 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 4.1e-16 89.0 125 36.0
CBR_g29478 Chara braunii HOM05D003732 ORTHO05D004965 4.1e-16 89.0 112 41.1
Solyc12g096780.2 Solanum lycopersicum HOM05D003732 ORTHO05D004965 4.1e-16 89.0 123 39.0
Sopen11g030320 Solanum pennellii HOM05D003732 ORTHO05D004965 4.1e-16 89.0 137 37.2
HPP92_018603 Vanilla planifolia HOM05D003732 ORTHO05D004965 4.1e-16 89.0 107 39.3
Cc01_g11890 Coffea canephora HOM05D003732 ORTHO05D004965 5.4e-16 88.6 123 38.2
QL01p035526 Quercus lobata HOM05D003732 ORTHO05D004965 5.4e-16 88.6 120 38.3
CAN.G84.23 Capsicum annuum HOM05D003732 ORTHO05D004965 9.2e-16 87.8 124 41.1
CAN.G84.25 Capsicum annuum HOM05D003732 ORTHO05D004965 9.2e-16 87.8 123 36.6
ClCG03G002100 Citrullus lanatus HOM05D003732 ORTHO05D004965 1.2e-15 87.4 123 38.2
Dinv06348 Davidia involucrata HOM05D003732 ORTHO05D004965 1.6e-15 87.0 123 35.8
DCAR_005290 Daucus carota HOM05D003732 ORTHO05D004965 2.0e-15 86.7 123 36.6
SEGI_38076 Sequoiadendron giganteum HOM05D003732 ORTHO05D014000 2.0e-15 86.7 81 49.4
Thhalv10025585m.g Eutrema salsugineum HOM05D003732 ORTHO05D004965 2.7e-15 86.3 106 40.6
MBI19_g13322_MAGBIO Magnolia biondii HOM05D003732 ORTHO05D004965 2.7e-15 86.3 124 37.9
Nitab4.5_0004465g0030 Nicotiana tabacum HOM05D003732 ORTHO05D004965 2.7e-15 86.3 123 36.6
EL10Ac7g15885 Beta vulgaris HOM05D003732 ORTHO05D004965 3.5e-15 85.9 124 35.5
Nitab4.5_0003743g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 3.5e-15 85.9 123 36.6
Solyc11g072640.3 Solanum lycopersicum HOM05D003732 ORTHO05D004965 3.5e-15 85.9 123 35.8
Sopen11g030310 Solanum pennellii HOM05D003732 ORTHO05D004965 3.5e-15 85.9 123 35.8
PGSC0003DMG400025357 Solanum tuberosum HOM05D003732 ORTHO05D004965 3.5e-15 85.9 123 35.8
ATR0594G235 Amborella trichopoda HOM05D003732 ORTHO05D004965 4.6e-15 85.5 124 36.3
Cpa.g.sc139.33 Carica papaya HOM05D003732 ORTHO05D004965 4.6e-15 85.5 123 36.6
FvH4_3g34120 Fragaria vesca HOM05D003732 ORTHO05D004965 4.6e-15 85.5 123 36.6
Prupe.6G090200 Prunus persica HOM05D003732 ORTHO05D004965 5.9e-15 85.1 120 38.3
Thecc.09G335200 Theobroma cacao HOM05D003732 ORTHO05D004965 5.9e-15 85.1 123 37.4
PGR102G1443 Punica granatum HOM05D003732 ORTHO05D004965 7.8e-15 84.7 123 35.0
Sed0004042 Sechium edule HOM05D003732 ORTHO05D004965 7.8e-15 84.7 123 37.4
Ah.15g096680 Amaranthus hybridus HOM05D003732 ORTHO05D004965 1.0e-14 84.3 124 35.5
RcHm_v2.0_Chr5g0061771 Rosa chinensis HOM05D003732 ORTHO05D004965 1.0e-14 84.3 123 35.8
SEGI_28331 Sequoiadendron giganteum HOM05D003732 ORTHO05D004965 1.0e-14 84.3 123 36.6
ATR0594G008 Amborella trichopoda HOM05D003732 ORTHO05D004965 1.3e-14 84.0 124 36.3
Hund18963 Selenicereus undatus HOM05D003732 ORTHO05D004965 1.3e-14 84.0 124 34.7
CDE09G1079 Ceratophyllum demersum HOM05D003732 ORTHO05D004965 1.7e-14 83.6 124 35.5
PSO339G6685 Papaver somniferum HOM05D003732 ORTHO05D004965 1.7e-14 83.6 120 35.8
PSO384G0746 Papaver somniferum HOM05D003732 ORTHO05D004965 1.7e-14 83.6 120 35.8
Gohir.A03G035700 Gossypium hirsutum HOM05D003732 ORTHO05D004965 2.3e-14 83.2 125 37.6
Cre01.g035350 Chlamydomonas reinhardtii HOM05D003732 ORTHO05D004965 5.0e-14 82.0 126 38.9
Sabra16G0139500 Salix brachista HOM05D003732 ORTHO05D004965 6.6e-14 81.6 136 33.8
Aqoxy4G03155 Aquilegia oxysepala HOM05D003732 ORTHO05D004965 8.6e-14 81.3 123 38.2
Nn2g10611 Nelumbo nucifera HOM05D003732 ORTHO05D004965 8.6e-14 81.3 119 35.3
TWI79G1305 Tripterygium wilfordii HOM05D003732 ORTHO05D004965 8.6e-14 81.3 120 35.8
Pp3c9_8960 Physcomitrium patens HOM05D003732 ORTHO05D004965 1.1e-13 80.9 125 40.0
SMO367G0374 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 2.5e-13 79.7 123 35.8
Nitab4.5_0003743g0010 Nicotiana tabacum HOM05D003732 ORTHO05D004965 3.3e-13 79.3 123 37.4
SEGI_14455 Sequoiadendron giganteum HOM05D003732 ORTHO05D014000 7.3e-13 78.2 79 46.8
BcaB05g22412 Brassica carinata HOM05D003732 ORTHO05D004965 9.5e-13 77.8 120 40.0
CANSAT54G2866 Cannabis sativa HOM05D003732 ORTHO05D004965 1.6e-12 77.0 155 30.3
vmacro14491 Vaccinium macrocarpon HOM05D003732 ORTHO05D004965 3.6e-12 75.9 143 30.1
Nn4g22676 Nelumbo nucifera HOM05D003732 ORTHO05D014000 8.0e-12 74.7 75 49.3
FAN11G1631 Fragaria x ananassa HOM05D003732 ORTHO05D004965 1.4e-11 73.9 142 31.7
PGSC0003DMG402029257 Solanum tuberosum HOM05D003732 ORTHO05D004965 5.2e-11 72.0 101 42.6
Cfa026351 Carpinus fangiana HOM05D003732 ORTHO05D004965 5.8e-10 68.6 126 34.1
Peaxi162Scf00616g00313 Petunia axillaris HOM05D003732 ORTHO05D004965 1.7e-09 67.0 123 35.0
Rhsim01G0223000 Rhododendron simsii HOM05D003732 ORTHO05D004965 1.4e-08 63.9 114 31.6
Haze_26759 Corylus avellana HOM05D003732 ORTHO05D004965 1.6e-07 60.5 125 30.4
Lj2C1044T10 Lonicera japonica HOM05D003732 ORTHO05D004965 1.3e-06 57.4 86 34.9


User provided reference genes

Program Settings