Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 3.9e-204 714.5 353 100.0
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 6.6e-135 484.6 314 72.6
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 7.3e-126 454.5 308 66.9
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 7.3e-126 454.5 311 69.1
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 3.9e-79 299.3 346 46.0
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 1.4e-68 264.2 177 72.3
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 4.1e-68 262.7 327 41.9
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 5.3e-68 262.3 311 45.0
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 7.0e-68 261.9 302 44.7
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 1.5e-57 227.6 303 40.6
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 2.5e-57 226.9 346 37.9
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 3.2e-57 226.5 304 41.1
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 2.1e-56 223.8 304 40.8
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 4.7e-56 222.6 305 39.7
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 6.1e-56 222.2 305 38.4
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 8.0e-56 221.9 304 38.5
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 8.0e-56 221.9 304 38.2
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 1.0e-55 221.5 304 40.5
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 1.0e-55 221.5 304 40.5
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 1.4e-55 221.1 342 37.1
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 2.3e-55 220.3 340 36.5
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 5.2e-55 219.2 305 38.4
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 5.2e-55 219.2 305 38.4
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 1.2e-54 218.0 353 37.7
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 5.7e-54 215.7 306 37.9
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 7.5e-54 215.3 304 37.2
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 9.8e-54 214.9 304 38.5
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 1.3e-53 214.5 303 37.3
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 1.7e-53 214.2 356 35.4
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 2.2e-53 213.8 342 36.3
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 2.2e-53 213.8 307 38.8
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 2.8e-53 213.4 302 38.1
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 4.8e-53 212.6 305 38.0
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 6.3e-53 212.2 304 37.8
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 1.1e-52 211.5 306 39.2
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 1.4e-52 211.1 300 37.7
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 1.8e-52 210.7 307 37.5
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 1.8e-52 210.7 335 36.7
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 4.1e-52 209.5 332 37.3
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 5.4e-52 209.1 346 35.3
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 7.0e-52 208.8 304 37.8
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 9.1e-52 208.4 302 36.1
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 1.2e-51 208.0 305 38.4
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 1.6e-51 207.6 304 36.8
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.6e-51 207.6 304 36.5
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 1.6e-51 207.6 303 36.6
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 1.6e-51 207.6 302 35.8
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 2.7e-51 206.8 333 37.2
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 3.5e-51 206.5 348 34.5
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 3.5e-51 206.5 305 38.4
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 4.5e-51 206.1 305 36.4
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 5.9e-51 205.7 335 34.6
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 1.0e-50 204.9 305 37.0
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 1.0e-50 204.9 306 38.2
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 1.3e-50 204.5 303 37.3
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 1.7e-50 204.1 305 36.7
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 1.7e-50 204.1 306 37.9
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 6.5e-50 202.2 305 36.4
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 1.5e-49 201.1 309 35.6
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 1.9e-49 200.7 335 33.7
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 2.5e-49 200.3 302 35.8
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 2.5e-49 200.3 305 36.1
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 3.2e-49 199.9 274 41.6
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 4.2e-49 199.5 269 39.4
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 5.5e-49 199.1 302 35.8
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 9.5e-49 198.4 302 35.1
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 1.2e-48 198.0 266 39.1
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 3.6e-48 196.4 322 36.0
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 6.1e-48 195.7 303 34.7
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 3.0e-47 193.4 305 34.4
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 4.0e-47 193.0 348 33.9
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 6.8e-47 192.2 353 33.7
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 5.7e-46 189.1 321 34.9
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 1.7e-45 187.6 309 35.3
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 2.8e-45 186.8 256 40.2
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 1.1e-44 184.9 274 36.9
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 3.1e-44 183.3 309 35.0
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 7.0e-44 182.2 242 40.1
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 4.5e-43 179.5 295 35.6
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 1.7e-42 177.6 249 39.0
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 6.1e-40 169.1 421 27.3
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 4.0e-39 166.4 287 33.1
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 5.2e-39 166.0 241 38.2
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 2.0e-38 164.1 253 37.9
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 4.4e-38 162.9 231 40.7
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 1.1e-36 158.3 375 29.6
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 3.5e-35 153.3 284 32.0
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 1.9e-33 147.5 191 38.7
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 5.8e-30 136.0 204 41.2
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 1.3e-29 134.8 179 39.7
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 1.9e-28 131.0 299 31.8
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 5.4e-28 129.4 171 39.8
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 2.5e-25 120.6 243 33.3
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 2.5e-25 120.6 237 29.1
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 9.5e-25 118.6 168 36.3
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 3.7e-21 106.7 167 34.1
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 9.2e-20 102.1 209 33.0
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 8.6e-18 95.5 158 36.7
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 3.3e-17 93.6 191 30.9
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 1.6e-16 91.3 186 29.6
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 2.8e-16 90.5 143 35.0
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 2.2e-13 80.9 84 42.9
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 1.4e-12 78.2 81 45.7
Cre06.g286300 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 7.1e-12 75.9 244 25.4
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 4.6e-11 73.2 308 24.7
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.7e-10 71.2 235 24.3
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 2.3e-10 70.9 120 31.7
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 6.6e-10 69.3 91 37.4
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 1.5e-09 68.2 135 31.1
Cre06.g286350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 5.6e-09 66.2 240 25.4
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 1.6e-08 64.7 243 23.0
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 3.6e-08 63.5 257 23.7
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 3.6e-08 63.5 132 31.1
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 9.0e-07 58.9 97 41.2
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 3.4e-06 57.0 127 29.9
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 9.9e-06 55.5 59 44.1


User provided reference genes

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