Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c17_23420 Physcomitrium patens HOM05D005370 ORTHO05D006659 7.1e-128 460.7 247 100.0
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 1.7e-44 183.7 253 42.7
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 3.9e-33 146.0 248 39.9
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 6.6e-33 145.2 241 39.8
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 1.1e-32 144.4 244 38.5
CBR_g32014 Chara braunii HOM05D005370 ORTHO05D006659 1.9e-32 143.7 262 36.6
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 1.9e-32 143.7 260 39.2
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 2.5e-32 143.3 241 39.8
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 2.5e-32 143.3 254 39.4
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 9.6e-32 141.4 239 38.1
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 1.6e-31 140.6 244 38.1
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 2.1e-31 140.2 250 38.8
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 2.8e-31 139.8 246 39.4
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 3.6e-31 139.4 247 36.0
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 4.8e-31 139.0 254 37.8
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 8.1e-31 138.3 247 35.6
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 8.1e-31 138.3 239 39.3
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 1.1e-30 137.9 239 38.1
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 2.4e-30 136.7 241 40.7
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 2.4e-30 136.7 243 38.3
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 3.1e-30 136.3 250 37.6
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 3.1e-30 136.3 239 38.5
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 3.1e-30 136.3 239 36.8
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 4.0e-30 136.0 241 40.7
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 4.0e-30 136.0 245 35.9
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 5.3e-30 135.6 239 36.8
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 5.3e-30 135.6 241 37.8
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 5.3e-30 135.6 247 37.7
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 6.9e-30 135.2 244 38.1
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 6.9e-30 135.2 241 40.2
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 6.9e-30 135.2 246 37.8
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 1.5e-29 134.0 244 36.9
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 1.5e-29 134.0 253 36.0
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 2.0e-29 133.7 239 36.0
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 2.6e-29 133.3 256 37.1
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 2.6e-29 133.3 265 35.8
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 3.4e-29 132.9 245 38.0
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 3.4e-29 132.9 239 35.6
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 3.4e-29 132.9 244 36.1
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 3.4e-29 132.9 239 36.8
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 3.4e-29 132.9 246 38.6
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 5.8e-29 132.1 244 35.7
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 9.9e-29 131.3 239 38.1
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 1.7e-28 130.6 258 36.0
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 1.7e-28 130.6 242 36.4
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 2.2e-28 130.2 239 37.2
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 2.9e-28 129.8 248 37.1
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 2.9e-28 129.8 249 38.2
AagrBONN_evm.TU.Sc2ySwM_228.5248 Anthoceros agrestis HOM05D005370 ORTHO05D006659 4.9e-28 129.0 226 37.2
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 4.9e-28 129.0 240 35.8
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 4.9e-28 129.0 239 36.8
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 6.4e-28 128.6 242 35.5
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 6.4e-28 128.6 248 36.3
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 1.1e-27 127.9 239 36.4
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 1.4e-27 127.5 216 38.9
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 2.4e-27 126.7 244 37.3
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 4.2e-27 125.9 244 37.7
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 4.2e-27 125.9 248 35.9
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 5.5e-27 125.6 252 36.9
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 7.1e-27 125.2 221 39.8
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 9.3e-27 124.8 244 34.4
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 2.7e-26 123.2 246 33.7
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 3.5e-26 122.9 247 35.6
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 4.6e-26 122.5 229 36.7
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 4.6e-26 122.5 105 56.2
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 6.0e-26 122.1 246 37.8
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 6.0e-26 122.1 258 32.9
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.3e-25 120.9 105 55.2
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 1.8e-25 120.6 291 32.0
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 3.0e-25 119.8 99 60.6
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 5.1e-25 119.0 107 59.8
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 6.7e-25 118.6 239 36.8
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 6.7e-25 118.6 236 36.9
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 8.7e-25 118.2 257 33.5
SGA_v2.0_scaffold138G35287 Striga asiatica HOM05D005370 ORTHO05D006659 1.5e-24 117.5 99 56.6
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 2.5e-24 116.7 98 59.2
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 2.5e-24 116.7 226 39.8
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 2.5e-24 116.7 99 57.6
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 3.3e-24 116.3 223 38.1
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 5.6e-24 115.5 246 33.3
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 5.6e-24 115.5 217 35.0
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 5.6e-24 115.5 244 35.2
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 9.6e-24 114.8 239 36.8
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 2.1e-23 113.6 246 33.7
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 2.8e-23 113.2 246 33.3
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 2.8e-23 113.2 249 33.3
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 3.7e-23 112.8 244 34.4
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 4.8e-23 112.5 246 31.7
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 6.2e-23 112.1 246 32.1
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 6.2e-23 112.1 246 32.1
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 6.2e-23 112.1 246 32.1
Nitab4.5_0001903g0040 Nicotiana tabacum HOM05D005370 ORTHO05D006659 6.2e-23 112.1 96 57.3
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 1.1e-22 111.3 246 32.1
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 1.1e-22 111.3 218 34.9
Glyma.02G142900 Glycine max HOM05D005370 ORTHO05D006659 5.3e-22 109.0 104 52.9
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 1.5e-21 107.5 246 31.7
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 1.5e-21 107.5 222 34.2
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 1.5e-21 107.5 244 34.4
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 1.7e-20 104.0 96 50.0
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 4.9e-20 102.4 211 37.9
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 6.5e-20 102.1 249 30.1
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 1.9e-19 100.5 244 31.1
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 4.2e-19 99.4 263 31.6
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 5.5e-19 99.0 88 52.3
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 7.1e-19 98.6 249 35.7
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 1.6e-18 97.4 211 34.6
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 6.7e-17 92.0 227 31.7
Nn8g40523 Nelumbo nucifera HOM05D005370 ORTHO05D006659 1.5e-13 80.9 126 41.3
SEGI_11901 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 2.0e-13 80.5 66 57.6
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 5.9e-13 79.0 246 28.0
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 7.6e-13 78.6 212 33.0
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 1.0e-12 78.2 182 33.5
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 1.3e-12 77.8 182 33.5
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 1.9e-11 73.9 303 25.1
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 2.7e-10 70.1 186 29.6
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 4.6e-10 69.3 248 26.2
Psat3g119360 Pisum sativum HOM05D005370 ORTHO05D006659 1.0e-09 68.2 53 56.6
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 1.8e-09 67.4 184 32.1
Psat3g119160 Pisum sativum HOM05D005370 ORTHO05D006659 6.7e-09 65.5 79 40.5
Nitab4.5_0004235g0010 Nicotiana tabacum HOM05D005370 ORTHO05D006659 4.3e-08 62.8 58 48.3
Cc01_g05510 Coffea canephora HOM05D005370 ORTHO05D006659 9.7e-08 61.6 58 50.0
SMO116G0410 Selaginella moellendorffii HOM05D005370 ORTHO05D006659 9.7e-08 61.6 229 28.8
Thhalv10003352m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 2.8e-07 60.1 104 34.6
Sopen01g042090 Solanum pennellii HOM05D005370 ORTHO05D006659 2.8e-07 60.1 178 32.0
MCO01G785 Micromonas commoda HOM05D005370 ORTHO05D006659 5.3e-06 55.8 85 30.6


User provided reference genes

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