Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c17_22590 Physcomitrium patens HOM05D000953 ORTHO05D000231 1.1e-29 132.5 63 100.0
Pp3c10_15980 Physcomitrium patens HOM05D000953 ORTHO05D000231 1.0e-17 92.8 60 73.3
Pp3c14_17150 Physcomitrium patens HOM05D000953 ORTHO05D000231 5.0e-17 90.5 60 70.0
Nitab4.5_0001519g0130 Nicotiana tabacum HOM05D000953 ORTHO05D000231 7.2e-08 60.1 61 45.9
Nitab4.5_0006861g0010 Nicotiana tabacum HOM05D000953 ORTHO05D000231 9.4e-08 59.7 61 45.9
Sopen07g020040 Solanum pennellii HOM05D000953 ORTHO05D000231 9.4e-08 59.7 61 45.9
PGSC0003DMG400010713 Solanum tuberosum HOM05D000953 ORTHO05D000231 9.4e-08 59.7 61 45.9
Peaxi162Scf00494g00053 Petunia axillaris HOM05D000953 ORTHO05D000231 2.1e-07 58.5 61 45.9
Solyc07g040960.1 Solanum lycopersicum HOM05D000953 ORTHO05D000231 2.1e-07 58.5 61 45.9
Duzib187G0887 Durio zibethinus HOM05D000953 ORTHO05D000231 2.7e-07 58.2 58 46.6
Sed0001921 Sechium edule HOM05D000953 ORTHO05D000231 4.6e-07 57.4 59 45.8
CSS0037175 Camellia sinensis var. sinensis HOM05D000953 ORTHO05D000231 6.1e-07 57.0 59 47.5
MELO3C029341.2 Cucumis melo HOM05D000953 ORTHO05D000231 6.1e-07 57.0 59 47.5
SEGI_06262 Sequoiadendron giganteum HOM05D000953 ORTHO05D000231 6.1e-07 57.0 60 48.3
TPR.G9431 Trifolium pratense HOM05D000953 ORTHO05D000231 6.1e-07 57.0 60 46.7
Aqoxy7G01147 Aquilegia oxysepala HOM05D000953 ORTHO05D000231 1.0e-06 56.2 58 46.6
CsaV3_1G040660 Cucumis sativus L. HOM05D000953 ORTHO05D000231 1.0e-06 56.2 59 45.8
Dinv36790 Davidia involucrata HOM05D000953 ORTHO05D000231 1.0e-06 56.2 58 44.8
Sabra06G0174100 Salix brachista HOM05D000953 ORTHO05D000231 1.0e-06 56.2 61 44.3
BcaB01g05435 Brassica carinata HOM05D000953 ORTHO05D000231 1.4e-06 55.8 57 45.6
ECA234G3320 Erigeron canadensis HOM05D000953 ORTHO05D000231 1.8e-06 55.5 60 43.3
Hma1.2p1_0169F.1_g074810 Hydrangea macrophylla HOM05D000953 ORTHO05D000231 1.8e-06 55.5 58 46.6
TPR.G27674 Trifolium pratense HOM05D000953 ORTHO05D000012 1.8e-06 55.5 60 43.3
Ca_21298_v3 Cicer arietinum L. HOM05D000953 ORTHO05D000231 3.0e-06 54.7 60 45.0
Nitab4.5_0002642g0070 Nicotiana tabacum HOM05D000953 ORTHO05D000231 3.0e-06 54.7 58 43.1
Nitab4.5_0002824g0030 Nicotiana tabacum HOM05D000953 ORTHO05D000231 3.0e-06 54.7 58 43.1
Oeu047095.1 Olea europaea HOM05D000953 ORTHO05D000231 3.0e-06 54.7 61 44.3
QL02p061895 Quercus lobata HOM05D000953 ORTHO05D000231 3.0e-06 54.7 61 44.3
VMungo1309G2253 Vigna mungo HOM05D000953 ORTHO05D000231 3.0e-06 54.7 61 44.3
AT5G12010 Arabidopsis thaliana HOM05D000953 ORTHO05D000231 3.9e-06 54.3 57 42.1
Haze_25945 Corylus avellana HOM05D000953 ORTHO05D000231 3.9e-06 54.3 61 44.3
Sed0021904 Sechium edule HOM05D000953 ORTHO05D000231 3.9e-06 54.3 59 45.8
TAR411G0003 Trochodendron aralioides HOM05D000953 ORTHO05D000231 3.9e-06 54.3 58 43.1
TAR413G0006 Trochodendron aralioides HOM05D000953 ORTHO05D000231 3.9e-06 54.3 58 43.1
TAR636G3357 Trochodendron aralioides HOM05D000953 ORTHO05D000231 3.9e-06 54.3 58 41.4
ClCG03G015390 Citrullus lanatus HOM05D000953 ORTHO05D000231 5.1e-06 53.9 59 44.1
Oeu052508.1 Olea europaea HOM05D000953 ORTHO05D000231 5.1e-06 53.9 61 45.9
PSO210G0994 Papaver somniferum HOM05D000953 ORTHO05D000231 5.1e-06 53.9 58 43.1
PSO210G6780 Papaver somniferum HOM05D000953 ORTHO05D000231 5.1e-06 53.9 58 43.1
TWI32G0762 Tripterygium wilfordii HOM05D000953 ORTHO05D000231 5.1e-06 53.9 58 43.1
TWI63G0330 Tripterygium wilfordii HOM05D000953 ORTHO05D000231 5.1e-06 53.9 58 44.8
A03p38810 Brassica napus HOM05D000953 ORTHO05D000231 6.7e-06 53.5 57 45.6
BolC3t13124H Brassica oleracea HOM05D000953 ORTHO05D000231 6.7e-06 53.5 57 43.9
BraA03t13028Z Brassica rapa HOM05D000953 ORTHO05D000231 6.7e-06 53.5 57 45.6
Cpa.g.sc7.152 Carica papaya HOM05D000953 ORTHO05D000231 6.7e-06 53.5 58 43.1
MBI05_g12567_MAGBIO Magnolia biondii HOM05D000953 ORTHO05D000231 6.7e-06 53.5 58 41.4
TWI32G0872 Tripterygium wilfordii HOM05D000953 ORTHO05D000231 6.7e-06 53.5 56 46.4
AL6G22800 Arabidopsis lyrata HOM05D000953 ORTHO05D000231 8.8e-06 53.1 57 42.1
C03p06170 Brassica napus HOM05D000953 ORTHO05D000231 8.8e-06 53.1 57 43.9


User provided reference genes

Program Settings