Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c17_20130 Physcomitrium patens HOM05D005543 ORTHO05D006584 1.4e-90 336.3 171 100.0
Pp3c1_40160 Physcomitrium patens HOM05D005543 ORTHO05D006584 1.0e-48 197.2 151 59.6
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 3.1e-21 105.9 142 37.3
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 6.2e-14 81.6 143 28.7
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 8.2e-14 81.3 143 32.2
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 8.2e-14 81.3 143 32.2
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 1.5e-12 77.0 143 26.6
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 4.5e-12 75.5 143 25.9
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 5.8e-12 75.1 143 27.3
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 5.8e-12 75.1 143 27.3
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 7.6e-12 74.7 144 28.5
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 7.6e-12 74.7 141 25.5
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 7.6e-12 74.7 143 27.3
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 7.6e-12 74.7 143 25.9
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 1.0e-11 74.3 141 24.8
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 1.3e-11 73.9 143 29.4
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 1.7e-11 73.6 143 25.9
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.2e-11 73.2 143 26.6
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 5.0e-11 72.0 143 25.9
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 1.1e-10 70.9 143 24.5
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 1.1e-10 70.9 151 29.8
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 1.4e-10 70.5 143 24.5
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 1.4e-10 70.5 143 24.5
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 2.5e-10 69.7 143 26.6
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 2.5e-10 69.7 143 23.8
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 3.2e-10 69.3 143 25.9
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 4.2e-10 68.9 152 27.6
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 4.2e-10 68.9 143 23.8
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 4.2e-10 68.9 152 28.3
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 7.1e-10 68.2 143 26.6
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 9.3e-10 67.8 143 25.9
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 9.3e-10 67.8 143 24.5
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 9.3e-10 67.8 151 27.2
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 1.2e-09 67.4 145 26.2
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 1.6e-09 67.0 143 23.8
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 1.6e-09 67.0 143 25.2
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 1.6e-09 67.0 143 24.5
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 1.6e-09 67.0 144 25.0
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.6e-09 67.0 70 41.4
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 1.6e-09 67.0 141 22.7
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 2.1e-09 66.6 143 26.6
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 3.5e-09 65.9 143 23.1
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 3.5e-09 65.9 143 23.1
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 3.5e-09 65.9 143 24.5
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 3.5e-09 65.9 146 25.3
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 3.5e-09 65.9 151 28.5
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 3.5e-09 65.9 151 29.1
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 4.6e-09 65.5 151 28.5
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 6.1e-09 65.1 152 23.7
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 6.1e-09 65.1 152 24.3
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 6.1e-09 65.1 143 24.5
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 6.1e-09 65.1 149 27.5
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 7.9e-09 64.7 143 22.4
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 7.9e-09 64.7 151 28.5
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 1.0e-08 64.3 143 23.8
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 1.0e-08 64.3 143 24.5
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 1.0e-08 64.3 143 22.4
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 1.0e-08 64.3 151 28.5
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 1.3e-08 63.9 143 23.1
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 1.3e-08 63.9 143 23.1
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 1.3e-08 63.9 143 24.5
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 1.8e-08 63.5 143 23.8
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 1.8e-08 63.5 145 25.5
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.8e-08 63.5 143 23.8
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.8e-08 63.5 144 26.4
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 2.3e-08 63.2 143 23.1
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 2.3e-08 63.2 136 25.7
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 3.0e-08 62.8 143 23.8
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 3.0e-08 62.8 143 23.1
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 3.0e-08 62.8 143 23.1
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 3.9e-08 62.4 143 22.4
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 3.9e-08 62.4 143 24.5
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 5.1e-08 62.0 143 24.5
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 5.1e-08 62.0 144 25.0
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 5.1e-08 62.0 154 27.3
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 5.1e-08 62.0 151 28.5
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 6.7e-08 61.6 143 23.1
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 6.7e-08 61.6 144 24.3
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 6.7e-08 61.6 143 22.4
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 6.7e-08 61.6 114 27.2
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 6.7e-08 61.6 143 24.5
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 8.7e-08 61.2 143 24.5
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 8.7e-08 61.2 143 23.8
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 1.1e-07 60.8 149 22.8
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.1e-07 60.8 83 32.5
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 1.5e-07 60.5 143 24.5
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 1.5e-07 60.5 145 25.5
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 1.9e-07 60.1 144 24.3
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 1.9e-07 60.1 143 23.1
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 1.9e-07 60.1 141 24.1
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 2.5e-07 59.7 143 21.7
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 3.3e-07 59.3 83 32.5
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 3.3e-07 59.3 155 25.2
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 3.3e-07 59.3 81 29.6
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 3.3e-07 59.3 143 25.9
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 4.3e-07 58.9 143 23.8
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 7.4e-07 58.2 143 22.4
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 9.7e-07 57.8 83 32.5
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 9.7e-07 57.8 147 24.5
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.8e-06 56.2 151 26.5
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 3.7e-06 55.8 143 21.7
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 4.8e-06 55.5 143 21.7
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 4.8e-06 55.5 83 30.1
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 4.8e-06 55.5 85 27.1
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 6.3e-06 55.1 139 23.7
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 6.3e-06 55.1 143 21.7
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 6.3e-06 55.1 144 24.3


User provided reference genes

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