Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 1.9e-115 419.5 262 100.0
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 1.7e-71 273.5 250 54.0
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 5.0e-71 271.9 247 60.7
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 9.4e-70 267.7 247 51.8
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 1.6e-69 266.9 247 61.1
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 2.1e-69 266.5 249 64.3
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 4.7e-69 265.4 247 52.2
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 6.1e-69 265.0 250 53.2
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 6.1e-69 265.0 247 71.3
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 8.0e-69 264.6 244 51.6
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 1.4e-68 263.8 247 72.1
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 1.4e-68 263.8 244 72.5
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 3.0e-68 262.7 248 71.4
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 4.0e-68 262.3 251 69.7
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 6.8e-68 261.5 244 71.7
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 6.8e-68 261.5 247 51.0
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 8.8e-68 261.2 244 51.2
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 1.2e-67 260.8 251 50.6
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 1.5e-67 260.4 247 70.0
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 3.4e-67 259.2 247 71.7
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 3.4e-67 259.2 244 71.3
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 3.4e-67 259.2 251 69.3
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 4.4e-67 258.8 247 69.6
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 4.4e-67 258.8 253 71.9
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 5.7e-67 258.5 250 52.4
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 5.7e-67 258.5 249 71.5
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 7.5e-67 258.1 247 68.8
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 7.5e-67 258.1 247 70.0
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 9.7e-67 257.7 247 69.6
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.3e-66 257.3 249 49.8
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 1.3e-66 257.3 243 67.5
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 1.3e-66 257.3 247 71.7
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 1.3e-66 257.3 249 58.6
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 1.7e-66 256.9 249 70.3
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 1.7e-66 256.9 247 69.6
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 1.7e-66 256.9 251 66.5
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 1.7e-66 256.9 249 69.9
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 2.2e-66 256.5 247 69.6
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 2.2e-66 256.5 243 72.0
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 2.2e-66 256.5 244 50.4
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 2.8e-66 256.1 247 71.3
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 2.8e-66 256.1 244 50.4
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 3.7e-66 255.8 250 51.6
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 3.7e-66 255.8 247 69.6
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 3.7e-66 255.8 251 68.1
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 4.8e-66 255.4 249 51.8
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 4.8e-66 255.4 249 51.8
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 4.8e-66 255.4 243 72.4
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 6.3e-66 255.0 247 68.4
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 6.3e-66 255.0 247 69.6
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 8.3e-66 254.6 255 67.8
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 1.1e-65 254.2 251 49.8
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 1.4e-65 253.8 249 51.8
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 1.8e-65 253.4 249 51.4
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 2.4e-65 253.1 243 68.3
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 3.1e-65 252.7 245 64.1
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 3.1e-65 252.7 243 70.0
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 4.1e-65 252.3 251 66.5
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 4.1e-65 252.3 251 68.5
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 4.1e-65 252.3 251 65.3
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 7.0e-65 251.5 251 68.9
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 7.0e-65 251.5 244 52.0
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 7.0e-65 251.5 247 66.4
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 7.0e-65 251.5 251 64.9
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 9.1e-65 251.1 249 51.0
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 9.1e-65 251.1 249 53.4
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 9.1e-65 251.1 243 68.3
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 9.1e-65 251.1 251 67.7
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 1.2e-64 250.8 243 70.0
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 2.0e-64 250.0 243 49.8
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 2.0e-64 250.0 251 54.2
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 2.0e-64 250.0 248 68.5
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 2.7e-64 249.6 247 49.4
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 2.7e-64 249.6 247 48.6
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 2.7e-64 249.6 251 49.4
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 3.5e-64 249.2 158 68.4
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 4.5e-64 248.8 247 67.2
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 4.5e-64 248.8 251 51.8
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 5.9e-64 248.4 245 51.0
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 7.7e-64 248.1 243 49.4
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.0e-63 247.7 247 50.2
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.7e-63 246.9 245 60.0
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 1.7e-63 246.9 247 69.2
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 1.7e-63 246.9 247 69.2
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 1.7e-63 246.9 251 67.7
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 2.9e-63 246.1 245 68.6
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 3.8e-63 245.7 241 69.3
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 3.8e-63 245.7 245 69.0
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 5.0e-63 245.4 251 66.9
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 5.0e-63 245.4 244 68.9
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 6.5e-63 245.0 241 68.0
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 6.5e-63 245.0 245 68.6
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 8.5e-63 244.6 248 69.0
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 4.2e-62 242.3 158 66.5
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 7.2e-62 241.5 248 66.5
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 1.2e-61 240.7 160 68.8
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 3.6e-61 239.2 257 66.9
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 3.6e-61 239.2 157 68.2
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 6.1e-61 238.4 245 49.0
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 1.0e-60 237.7 157 64.3
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 1.2e-59 234.2 158 65.2
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.2e-59 234.2 245 66.5
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 5.7e-59 231.9 251 62.9
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 7.5e-59 231.5 253 47.8
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 8.3e-58 228.0 253 47.8
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 6.6e-55 218.4 254 44.9
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 1.2e-53 214.2 226 49.1
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.8e-52 210.3 187 56.1
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 6.6e-47 191.8 138 60.1
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.4e-44 184.1 121 62.8
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 2.0e-43 180.3 305 35.1
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 5.4e-41 172.2 127 58.3
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 1.6e-40 170.6 260 47.7
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 3.6e-37 159.5 94 70.2
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 1.8e-28 130.6 102 56.9
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 6.4e-18 95.5 120 43.3
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 1.1e-14 84.7 87 51.7
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-07 61.2 151 29.8
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 2.3e-07 60.5 125 28.8
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 1.9e-06 57.4 66 43.9


User provided reference genes

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