Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c17_13640 Physcomitrium patens HOM05D006045 ORTHO05D007678 1.6e-294 1015.4 515 100.0
Mapoly0002s0152 Marchantia polymorpha HOM05D006045 ORTHO05D007678 3.4e-87 326.6 432 43.8
SMO361G0306 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 5.1e-59 233.0 413 36.8
SEGI_25878 Sequoiadendron giganteum HOM05D006045 ORTHO05D007678 5.1e-59 233.0 417 36.5
SMO361G0160 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 2.5e-58 230.7 413 36.8
ATR0559G357 Amborella trichopoda HOM05D006045 ORTHO05D007678 1.1e-48 198.7 381 35.4
MBI14_g08020_MAGBIO Magnolia biondii HOM05D006045 ORTHO05D007678 3.1e-48 197.2 371 35.0
CBR_g8766 Chara braunii HOM05D006045 ORTHO05D007678 3.4e-47 193.7 465 31.0
TAR623G1560 Trochodendron aralioides HOM05D006045 ORTHO05D007678 8.4e-46 189.1 373 33.8
Manes.09G092411 Manihot esculenta HOM05D006045 ORTHO05D007678 1.4e-45 188.3 389 32.6
PGR004G1833 Punica granatum HOM05D006045 ORTHO05D007678 1.4e-45 188.3 377 34.7
Nn2g11183 Nelumbo nucifera HOM05D006045 ORTHO05D007678 3.2e-45 187.2 371 35.0
Prupe.6G259100 Prunus persica HOM05D006045 ORTHO05D007678 4.2e-45 186.8 370 33.0
QL07p030118 Quercus lobata HOM05D006045 ORTHO05D007678 1.6e-44 184.9 370 33.2
CDE06G1975 Ceratophyllum demersum HOM05D006045 ORTHO05D007678 2.1e-44 184.5 368 34.5
EL10Ac2g03023 Beta vulgaris HOM05D006045 ORTHO05D007678 6.0e-44 183.0 378 32.8
QL07p030894 Quercus lobata HOM05D006045 ORTHO05D007678 7.8e-44 182.6 377 33.2
CiPaw.09G195700 Carya illinoinensis HOM05D006045 ORTHO05D007678 3.9e-43 180.3 368 32.1
CANSAT35G0136 Cannabis sativa HOM05D006045 ORTHO05D007678 6.6e-43 179.5 367 32.7
Thecc.05G035700 Theobroma cacao HOM05D006045 ORTHO05D007678 8.7e-43 179.1 393 32.3
Os05g0457700 Oryza sativa ssp. japonica HOM05D006045 ORTHO05D007678 1.1e-42 178.7 385 34.0
AUR62034450 Chenopodium quinoa HOM05D006045 ORTHO05D007678 1.5e-42 178.3 394 31.7
AUR62018119 Chenopodium quinoa HOM05D006045 ORTHO05D007678 4.3e-42 176.8 408 31.6
Ciclev10011734m.g Citrus clementina HOM05D006045 ORTHO05D007678 4.3e-42 176.8 371 32.1
FvH4_6g13250 Fragaria vesca HOM05D006045 ORTHO05D007678 4.3e-42 176.8 388 30.9
Sopen09g005740 Solanum pennellii HOM05D006045 ORTHO05D007678 4.3e-42 176.8 381 32.5
Cfa017339 Carpinus fangiana HOM05D006045 ORTHO05D007678 5.6e-42 176.4 337 33.8
PGSC0003DMG400008825 Solanum tuberosum HOM05D006045 ORTHO05D007678 5.6e-42 176.4 381 32.3
Solyc09g011020.4 Solanum lycopersicum HOM05D006045 ORTHO05D007678 9.6e-42 175.6 396 32.1
Haze_20828 Corylus avellana HOM05D006045 ORTHO05D007678 1.6e-41 174.9 337 33.5
Gorai.009G406000 Gossypium raimondii HOM05D006045 ORTHO05D007678 1.6e-41 174.9 427 30.7
Gohir.A04G065300 Gossypium hirsutum HOM05D006045 ORTHO05D007678 2.8e-41 174.1 390 31.3
MD12G1145400 Malus domestica HOM05D006045 ORTHO05D007678 2.8e-41 174.1 381 31.8
GSVIVG01034130001 Vitis vinifera HOM05D006045 ORTHO05D007678 3.6e-41 173.7 359 32.9
DCAR_028758 Daucus carota HOM05D006045 ORTHO05D007678 4.8e-41 173.3 382 33.8
CsaV3_3G034720 Cucumis sativus L. HOM05D006045 ORTHO05D007678 8.1e-41 172.6 402 33.6
CAN.G597.3 Capsicum annuum HOM05D006045 ORTHO05D007678 1.4e-40 171.8 421 30.9
CSS0032526 Camellia sinensis var. sinensis HOM05D006045 ORTHO05D007678 1.8e-40 171.4 371 33.4
FAN02G2147 Fragaria x ananassa HOM05D006045 ORTHO05D007678 1.8e-40 171.4 389 30.8
Gohir.D04G102700 Gossypium hirsutum HOM05D006045 ORTHO05D007678 3.1e-40 170.6 428 30.8
PSO339G1759 Papaver somniferum HOM05D006045 ORTHO05D007678 5.3e-40 169.9 428 29.7
MELO3C009242.2 Cucumis melo HOM05D006045 ORTHO05D007678 9.0e-40 169.1 370 34.1
FAN14G1932 Fragaria x ananassa HOM05D006045 ORTHO05D007678 1.5e-39 168.3 399 30.1
Potri.002G091400 Populus trichocarpa HOM05D006045 ORTHO05D007678 2.6e-39 167.5 369 31.7
vmacro08642 Vaccinium macrocarpon HOM05D006045 ORTHO05D007678 2.6e-39 167.5 381 33.1
Sed0026133 Sechium edule HOM05D006045 ORTHO05D007678 4.4e-39 166.8 373 33.0
RcHm_v2.0_Chr3g0466081 Rosa chinensis HOM05D006045 ORTHO05D007678 5.8e-39 166.4 375 31.2
MD04G1132700 Malus domestica HOM05D006045 ORTHO05D007678 9.9e-39 165.6 338 32.8
Duzib106G0862 Durio zibethinus HOM05D006045 ORTHO05D007678 1.3e-38 165.2 428 29.9
Aa31LG1G22600 Aethionema arabicum HOM05D006045 ORTHO05D007678 1.1e-37 162.2 372 29.8
Carub.0006s0097 Capsella rubella HOM05D006045 ORTHO05D007678 1.1e-37 162.2 374 30.5
THA.LOC104816254 Tarenaya hassleriana HOM05D006045 ORTHO05D007678 1.4e-37 161.8 393 30.3
Eucgr.K03104 Eucalyptus grandis HOM05D006045 ORTHO05D007678 1.9e-37 161.4 372 29.3
BcaB01g06214 Brassica carinata HOM05D006045 ORTHO05D007678 3.2e-37 160.6 374 31.3
TWI77G0138 Tripterygium wilfordii HOM05D006045 ORTHO05D007678 7.1e-37 159.5 429 29.4
Hund15247 Selenicereus undatus HOM05D006045 ORTHO05D007678 9.3e-37 159.1 434 27.2
Lj3g0020199 Lotus japonicus HOM05D006045 ORTHO05D007678 1.2e-36 158.7 383 32.4
Oeu010102.1 Olea europaea HOM05D006045 ORTHO05D007678 1.2e-36 158.7 378 31.2
SGA_v2.0_scaffold126G33761 Striga asiatica HOM05D006045 ORTHO05D007678 1.2e-36 158.7 370 32.2
Ca_07336_v3 Cicer arietinum L. HOM05D006045 ORTHO05D007678 1.6e-36 158.3 348 32.2
Psat3g136040 Pisum sativum HOM05D006045 ORTHO05D007678 1.6e-36 158.3 348 31.6
AT5G02130 Arabidopsis thaliana HOM05D006045 ORTHO05D007678 2.1e-36 157.9 374 30.5
CARHR211230 Cardamine hirsuta HOM05D006045 ORTHO05D007678 2.1e-36 157.9 374 31.3
AL6G11360 Arabidopsis lyrata HOM05D006045 ORTHO05D007678 2.7e-36 157.5 375 29.9
BolC9t60170H Brassica oleracea HOM05D006045 ORTHO05D007678 2.7e-36 157.5 373 30.3
SHI12713 Sapria himalayana HOM05D006045 ORTHO05D007678 2.7e-36 157.5 402 30.8
C09p74360 Brassica napus HOM05D006045 ORTHO05D007678 1.3e-35 155.2 373 30.0
ECA248G0328 Erigeron canadensis HOM05D006045 ORTHO05D007678 1.3e-35 155.2 377 32.1
Lalb_Chr03g0042401 Lupinus albus HOM05D006045 ORTHO05D007678 1.3e-35 155.2 376 30.3
BraA03t09445Z Brassica rapa HOM05D006045 ORTHO05D007678 1.7e-35 154.8 373 29.5
HanXRQChr13g0406931 Helianthus annuus HOM05D006045 ORTHO05D007678 1.7e-35 154.8 365 32.6
arahy.Tifrunner.gnm1.ann1.H3QXFP Arachis hypogaea HOM05D006045 ORTHO05D007678 2.3e-35 154.5 401 30.7
Lj1g0013519 Lotus japonicus HOM05D006045 ORTHO05D007678 2.3e-35 154.5 380 31.8
MSTRG.19073 Avicennia marina HOM05D006045 ORTHO05D007678 5.1e-35 153.3 366 30.6
Medtr7g062630 Medicago truncatula HOM05D006045 ORTHO05D007678 3.3e-34 150.6 348 31.0
Thhalv10013663m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 5.6e-34 149.8 373 29.2
Sp6g40310 Schrenkiella parvula HOM05D006045 ORTHO05D007678 5.6e-34 149.8 370 29.7
BraA10t45376Z Brassica rapa HOM05D006045 ORTHO05D007678 7.3e-34 149.4 388 29.9
VMungo1383G2703 Vigna mungo HOM05D006045 ORTHO05D007678 2.8e-33 147.5 348 32.2
Cc06_g02350 Coffea canephora HOM05D006045 ORTHO05D007678 6.2e-33 146.4 389 30.8
Migut.J00307 Erythranthe guttata HOM05D006045 ORTHO05D007678 6.2e-33 146.4 367 30.0
Lsat_1_v5_gn_5_154000 Lactuca sativa HOM05D006045 ORTHO05D007678 1.1e-32 145.6 377 30.5
A03p00550 Brassica napus HOM05D006045 ORTHO05D007678 1.4e-32 145.2 398 28.1
Rhsim04G0158800 Rhododendron simsii HOM05D006045 ORTHO05D007678 5.3e-32 143.3 358 31.8
Lj3A965G74 Lonicera japonica HOM05D006045 ORTHO05D007678 2.0e-31 141.4 314 33.4
A10p33460 Brassica napus HOM05D006045 ORTHO05D007678 7.6e-31 139.4 421 27.8
Sc22g0004440 Simmondsia chinensis HOM05D006045 ORTHO05D007678 7.6e-31 139.4 297 33.0
Sabra02G0072200 Salix brachista HOM05D006045 ORTHO05D007678 2.2e-30 137.9 371 28.6
Glyma.18G185200 Glycine max HOM05D006045 ORTHO05D007678 8.4e-30 136.0 391 30.7
HPP92_014298 Vanilla planifolia HOM05D006045 ORTHO05D007678 1.2e-28 132.1 210 37.1
Nitab4.5_0003394g0010 Nicotiana tabacum HOM05D006045 ORTHO05D007678 3.5e-28 130.6 298 33.9
Nitab4.5_0000705g0060 Nicotiana tabacum HOM05D006045 ORTHO05D007678 7.9e-28 129.4 315 32.1
C03p00810 Brassica napus HOM05D006045 ORTHO05D007678 6.7e-27 126.3 314 30.3
Peaxi162Scf00527g00742 Petunia axillaris HOM05D006045 ORTHO05D007678 6.7e-27 126.3 313 30.4
CiPaw.09G197100 Carya illinoinensis HOM05D006045 ORTHO05D007678 2.5e-26 124.4 187 34.8
arahy.Tifrunner.gnm1.ann1.FBGI2B Arachis hypogaea HOM05D006045 ORTHO05D007678 7.4e-26 122.9 320 31.2
Aqoxy1G00880 Aquilegia oxysepala HOM05D006045 ORTHO05D007678 2.8e-25 120.9 289 29.8
BcaB01g06067 Brassica carinata HOM05D006045 ORTHO05D007678 4.8e-25 120.2 370 26.2
SalBow1G6939 Salvia bowleyana HOM05D006045 ORTHO05D007678 4.8e-25 120.2 299 32.8
FAN05G2873 Fragaria x ananassa HOM05D006045 ORTHO05D007678 1.2e-23 115.5 190 33.2
TPR.G18356 Trifolium pratense HOM05D006045 ORTHO05D007678 3.2e-21 107.5 251 31.5
ClCG10G021320 Citrullus lanatus HOM05D006045 ORTHO05D007678 2.8e-17 94.4 306 31.0
Gohir.A04G065314 Gossypium hirsutum HOM05D006045 ORTHO05D007678 2.6e-15 87.8 107 40.2
Medtr6g445490 Medicago truncatula HOM05D006045 ORTHO05D007678 1.4e-13 82.0 391 23.8
Rhsim04G0160900 Rhododendron simsii HOM05D006045 ORTHO05D007678 4.2e-13 80.5 370 23.8
Phvul.008G118100 Phaseolus vulgaris HOM05D006045 ORTHO05D007678 6.7e-11 73.2 226 29.2
Zm00001eb351230 Zea mays HOM05D006045 ORTHO05D007678 6.3e-09 66.6 242 27.7
PSO063G1044 Papaver somniferum HOM05D006045 ORTHO05D007678 4.1e-08 63.9 218 28.4
Hma1.2p1_0028F.1_g017940 Hydrangea macrophylla HOM05D006045 ORTHO05D007678 2.6e-07 61.2 120 30.8
Cpa.g.sc169.5 Carica papaya HOM05D006045 ORTHO05D007678 1.7e-06 58.5 124 32.3
HPP92_014299 Vanilla planifolia HOM05D006045 ORTHO05D007678 2.9e-06 57.8 111 36.0


User provided reference genes

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