Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 8.9e-87 323.6 162 100.0
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 3.8e-61 238.4 133 88.7
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 1.6e-30 136.7 153 47.1
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 8.5e-29 131.0 143 47.6
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 1.1e-28 130.6 144 45.8
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 1.9e-28 129.8 144 45.1
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 1.9e-28 129.8 144 47.9
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 4.2e-28 128.6 142 49.3
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 4.2e-28 128.6 145 45.5
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 5.5e-28 128.3 144 47.2
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 5.5e-28 128.3 144 48.6
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 7.2e-28 127.9 144 48.6
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 2.1e-27 126.3 149 45.0
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 2.1e-27 126.3 144 47.9
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 2.7e-27 125.9 135 48.9
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 3.6e-27 125.6 117 53.8
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 4.7e-27 125.2 144 41.7
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 8.0e-27 124.4 144 45.8
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 8.0e-27 124.4 135 48.9
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.0e-26 124.0 145 44.8
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 1.4e-26 123.6 134 44.0
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 1.8e-26 123.2 141 45.4
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 1.8e-26 123.2 144 47.2
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 1.8e-26 123.2 119 51.3
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 2.3e-26 122.9 119 52.1
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 5.2e-26 121.7 132 44.7
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 6.7e-26 121.3 144 45.8
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 6.7e-26 121.3 144 43.8
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 6.7e-26 121.3 149 41.6
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 1.5e-25 120.2 129 48.1
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 3.3e-25 119.0 142 44.4
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 3.3e-25 119.0 142 44.4
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 4.4e-25 118.6 144 42.4
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 5.7e-25 118.2 144 44.4
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 5.7e-25 118.2 144 43.8
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 7.5e-25 117.9 115 49.6
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 9.7e-25 117.5 144 43.1
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 9.7e-25 117.5 142 45.8
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 9.7e-25 117.5 133 44.4
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 1.3e-24 117.1 133 44.4
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 1.7e-24 116.7 149 42.3
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 2.2e-24 116.3 145 44.1
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 2.8e-24 115.9 144 43.1
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 2.8e-24 115.9 144 43.1
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 2.8e-24 115.9 144 43.1
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 2.8e-24 115.9 144 43.1
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 2.8e-24 115.9 134 44.0
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 4.8e-24 115.2 154 41.6
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 6.3e-24 114.8 144 39.6
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 8.2e-24 114.4 144 41.7
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 8.2e-24 114.4 144 42.4
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 8.2e-24 114.4 146 43.2
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 1.1e-23 114.0 149 39.6
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 1.1e-23 114.0 153 37.9
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 1.4e-23 113.6 129 45.0
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 1.8e-23 113.2 144 41.7
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 3.1e-23 112.5 134 42.5
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 4.1e-23 112.1 144 42.4
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 5.3e-23 111.7 150 39.3
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 5.3e-23 111.7 146 42.5
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 9.1e-23 110.9 144 42.4
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 1.2e-22 110.5 149 38.9
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 1.2e-22 110.5 149 38.9
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 1.2e-22 110.5 145 41.4
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 1.2e-22 110.5 154 39.6
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 1.2e-22 110.5 120 45.0
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 1.6e-22 110.2 140 42.1
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 1.6e-22 110.2 120 44.2
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 1.6e-22 110.2 144 40.3
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 2.0e-22 109.8 144 42.4
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 2.0e-22 109.8 144 39.6
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 2.7e-22 109.4 144 41.0
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 3.5e-22 109.0 149 40.3
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 5.9e-22 108.2 144 41.7
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 5.9e-22 108.2 142 40.1
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 5.9e-22 108.2 174 37.4
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 5.9e-22 108.2 149 38.3
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 1.0e-21 107.5 144 42.4
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 1.0e-21 107.5 119 46.2
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 1.7e-21 106.7 108 48.1
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 1.7e-21 106.7 132 43.9
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 2.2e-21 106.3 119 44.5
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 2.9e-21 105.9 119 43.7
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 5.0e-21 105.1 142 42.3
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 5.0e-21 105.1 142 42.3
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 2.5e-20 102.8 167 34.7
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 2.5e-20 102.8 118 42.4
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 2.5e-20 102.8 124 43.5
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 3.2e-20 102.4 166 36.1
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 1.2e-19 100.5 144 37.5
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.6e-19 100.1 101 51.5
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 3.6e-19 99.0 127 39.4
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 6.1e-19 98.2 96 51.0
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 6.1e-19 98.2 168 36.9
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 1.2e-17 94.0 120 40.8
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 2.6e-17 92.8 104 48.1
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 9.8e-17 90.9 108 42.6
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.3e-16 90.5 108 42.6
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 2.8e-16 89.4 124 37.1
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 4.8e-16 88.6 85 47.1
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 1.6e-14 83.6 115 37.4
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 2.0e-14 83.2 144 38.2
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 5.5e-12 75.1 70 54.3
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 9.5e-12 74.3 85 44.7
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 1.8e-10 70.1 76 44.7
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 3.0e-10 69.3 83 41.0
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 4.0e-10 68.9 69 49.3
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 9.8e-09 64.3 70 47.1
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.7e-08 63.5 141 31.2
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 2.8e-08 62.8 69 46.4
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 6.3e-08 61.6 68 42.6
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 2.0e-06 56.6 78 42.3


User provided reference genes

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