Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c17_10510 Physcomitrium patens HOM05D000131 ORTHO05D308636 1.7e-37 158.7 72 100.0
Pp3c12_7400 Physcomitrium patens HOM05D000131 ORTHO05D316586 6.5e-13 77.0 49 73.5
Pp3c3_10990 Physcomitrium patens HOM05D000131 ORTHO05D037333 9.7e-09 63.2 48 66.7
Phvul.004G059200 Phaseolus vulgaris HOM05D000131 ORTHO05D000086 3.7e-08 61.2 57 56.1
Medtr6g021950 Medicago truncatula HOM05D000131 ORTHO05D000086 1.4e-07 59.3 57 54.4
VMungo0464G1348 Vigna mungo HOM05D000131 ORTHO05D000086 1.4e-07 59.3 57 54.4
CDE09G0557 Ceratophyllum demersum HOM05D000131 ORTHO05D000086 1.8e-07 58.9 55 56.4
Psat1g178840 Pisum sativum HOM05D000131 ORTHO05D000086 3.1e-07 58.2 60 48.3
TPR.G13047 Trifolium pratense HOM05D000131 ORTHO05D000086 3.1e-07 58.2 60 46.7
TPR.G37112 Trifolium pratense HOM05D000131 ORTHO05D000086 3.1e-07 58.2 56 50.0
Ca_04392_v3 Cicer arietinum L. HOM05D000131 ORTHO05D000086 5.3e-07 57.4 57 52.6
Lj2g0015222 Lotus japonicus HOM05D000131 ORTHO05D000086 5.3e-07 57.4 57 50.9
vmacro19259 Vaccinium macrocarpon HOM05D000131 ORTHO05D000086 5.3e-07 57.4 57 52.6
Peaxi162Scf00128g00642 Petunia axillaris HOM05D000131 ORTHO05D000086 6.9e-07 57.0 56 51.8
CDE02G2978 Ceratophyllum demersum HOM05D000131 ORTHO05D000086 9.1e-07 56.6 56 51.8
Glyma.05G114000 Glycine max HOM05D000131 ORTHO05D000086 1.2e-06 56.2 57 50.9
Glyma.19G053800 Glycine max HOM05D000131 ORTHO05D000086 1.2e-06 56.2 57 50.9
TPR.G21640 Trifolium pratense HOM05D000131 ORTHO05D000086 1.2e-06 56.2 57 52.6
TPR.G37039 Trifolium pratense HOM05D000131 ORTHO05D000086 1.2e-06 56.2 56 48.2
ClCG03G004510 Citrullus lanatus HOM05D000131 ORTHO05D000086 1.5e-06 55.8 60 43.3
Nitab4.5_0004647g0020 Nicotiana tabacum HOM05D000131 ORTHO05D000086 1.5e-06 55.8 56 51.8
THA.LOC104806314 Tarenaya hassleriana HOM05D000131 ORTHO05D000086 1.5e-06 55.8 56 48.2
Medtr2g023990 Medicago truncatula HOM05D000131 ORTHO05D000086 2.0e-06 55.5 60 45.0
vmacro18304 Vaccinium macrocarpon HOM05D000131 ORTHO05D000086 2.0e-06 55.5 57 50.9
CAN.G658.1 Capsicum annuum HOM05D000131 ORTHO05D000086 2.6e-06 55.1 56 50.0
Ca_00682_v3 Cicer arietinum L. HOM05D000131 ORTHO05D000086 2.6e-06 55.1 60 45.0
Lalb_Chr02g0158071 Lupinus albus HOM05D000131 ORTHO05D000086 2.6e-06 55.1 57 50.9
Nitab4.5_0000041g0140 Nicotiana tabacum HOM05D000131 ORTHO05D000086 2.6e-06 55.1 56 50.0
Peaxi162Scf00178g01015 Petunia axillaris HOM05D000131 ORTHO05D000086 2.6e-06 55.1 60 45.0
Phvul.006G147500 Phaseolus vulgaris HOM05D000131 ORTHO05D000086 2.6e-06 55.1 56 48.2
Pp3c17_16370 Physcomitrium patens HOM05D000131 ORTHO05D000086 2.6e-06 55.1 59 47.5
Sabra04G0004100 Salix brachista HOM05D000131 ORTHO05D000086 2.6e-06 55.1 60 48.3
VMungo0540G1217 Vigna mungo HOM05D000131 ORTHO05D000086 2.6e-06 55.1 56 48.2
Ah.03g133580 Amaranthus hybridus HOM05D000131 ORTHO05D000086 3.4e-06 54.7 55 47.3
Cc07_g00190 Coffea canephora HOM05D000131 ORTHO05D000086 3.4e-06 54.7 57 50.9
Manes.17G109100 Manihot esculenta HOM05D000131 ORTHO05D000086 3.4e-06 54.7 57 50.9
Sc14g0008860 Simmondsia chinensis HOM05D000131 ORTHO05D000086 3.4e-06 54.7 56 48.2
Ah.13g072710 Amaranthus hybridus HOM05D000131 ORTHO05D000086 4.5e-06 54.3 57 45.6
Haze_20507 Corylus avellana HOM05D000131 ORTHO05D000086 4.5e-06 54.3 61 45.9
MELO3C002431.2 Cucumis melo HOM05D000131 ORTHO05D000086 4.5e-06 54.3 60 41.7
CsaV3_1G010410 Cucumis sativus L. HOM05D000131 ORTHO05D000086 4.5e-06 54.3 60 41.7
Lalb_Chr20g0118871 Lupinus albus HOM05D000131 ORTHO05D000086 4.5e-06 54.3 71 40.8
Manes.08G012400 Manihot esculenta HOM05D000131 ORTHO05D000086 4.5e-06 54.3 61 47.5
Oeu038655.1 Olea europaea HOM05D000131 ORTHO05D000086 4.5e-06 54.3 56 48.2
Pp3c1_10180 Physcomitrium patens HOM05D000131 ORTHO05D000086 4.5e-06 54.3 56 46.4
Pp3c1_10470 Physcomitrium patens HOM05D000131 ORTHO05D000086 4.5e-06 54.3 56 46.4
Pp3s38_30 Physcomitrium patens HOM05D000131 ORTHO05D000086 4.5e-06 54.3 56 46.4
PGR083G0763 Punica granatum HOM05D000131 ORTHO05D000086 4.5e-06 54.3 56 46.4
SMO347G0402 Selaginella moellendorffii HOM05D000131 ORTHO05D000086 4.5e-06 54.3 57 49.1
Hund13023 Selenicereus undatus HOM05D000131 ORTHO05D000086 4.5e-06 54.3 57 49.1
Solyc05g014000.4 Solanum lycopersicum HOM05D000131 ORTHO05D000086 4.5e-06 54.3 56 48.2
arahy.Tifrunner.gnm1.ann1.H1W6SU Arachis hypogaea HOM05D000131 ORTHO05D000086 5.9e-06 53.9 57 50.9
EL10Ac7g18041 Beta vulgaris HOM05D000131 ORTHO05D000086 5.9e-06 53.9 57 49.1
Sed0012517 Sechium edule HOM05D000131 ORTHO05D000086 5.9e-06 53.9 60 43.3
Sopen05g008950 Solanum pennellii HOM05D000131 ORTHO05D000086 5.9e-06 53.9 56 48.2
PGSC0003DMG400010771 Solanum tuberosum HOM05D000131 ORTHO05D000086 5.9e-06 53.9 56 48.2
ATR0088G043 Amborella trichopoda HOM05D000131 ORTHO05D000086 7.7e-06 53.5 61 47.5
arahy.Tifrunner.gnm1.ann1.5932D5 Arachis hypogaea HOM05D000131 ORTHO05D000086 7.7e-06 53.5 57 49.1
arahy.Tifrunner.gnm1.ann1.W9IDLJ Arachis hypogaea HOM05D000131 ORTHO05D000086 7.7e-06 53.5 57 49.1
Cfa000184 Carpinus fangiana HOM05D000131 ORTHO05D000086 7.7e-06 53.5 60 43.3
FAN09G3424 Fragaria x ananassa HOM05D000131 ORTHO05D000086 7.7e-06 53.5 57 49.1
Lj1g0018319 Lotus japonicus HOM05D000131 ORTHO05D000086 7.7e-06 53.5 61 47.5
Lj6g0011932 Lotus japonicus HOM05D000131 ORTHO05D000086 7.7e-06 53.5 60 43.3
Pp3c3_3490 Physcomitrium patens HOM05D000131 ORTHO05D000086 7.7e-06 53.5 56 44.6
TPR.G21012 Trifolium pratense HOM05D000131 ORTHO05D000086 7.7e-06 53.5 61 47.5


User provided reference genes

Program Settings