Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c16_7220 Physcomitrium patens HOM05D004671 ORTHO05D005638 0.0e+00 1081.2 560 100.0
Mapoly0133s0004 Marchantia polymorpha HOM05D004671 ORTHO05D005638 2.3e-174 616.3 563 58.6
AagrBONN_evm.TU.Sc2ySwM_344.423 Anthoceros agrestis HOM05D004671 ORTHO05D005638 5.6e-136 488.8 564 46.8
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 3.4e-109 399.8 569 42.9
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 4.1e-107 392.9 564 42.7
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 5.6e-104 382.5 507 42.4
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 3.4e-101 373.2 563 40.9
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 6.4e-100 369.0 563 38.7
COL.COLO4_14329 Corchorus olitorius HOM05D004671 ORTHO05D005638 9.3e-99 365.2 565 39.1
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 3.9e-97 359.8 588 38.4
ATR0737G144 Amborella trichopoda HOM05D004671 ORTHO05D005638 3.3e-96 356.7 563 40.1
Atru.chr1.442 Acer truncatum HOM05D004671 ORTHO05D005638 7.3e-96 355.5 566 40.8
Cpa.g.sc107.62 Carica papaya HOM05D004671 ORTHO05D005638 2.1e-95 354.0 585 37.4
Ciclev10004721m.g Citrus clementina HOM05D004671 ORTHO05D005638 3.6e-95 353.2 565 37.9
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 3.1e-94 350.1 564 39.0
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 6.9e-94 349.0 564 38.8
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 1.2e-93 348.2 564 36.7
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 2.0e-93 347.4 564 38.7
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 9.9e-93 345.1 569 38.3
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 1.7e-92 344.4 563 39.8
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 2.2e-92 344.0 563 39.8
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 2.9e-92 343.6 562 38.8
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 4.9e-92 342.8 561 38.1
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 1.1e-91 341.7 568 37.0
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 1.6e-90 337.8 556 38.7
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 1.6e-90 337.8 571 37.3
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 3.5e-90 336.7 569 36.4
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 6.0e-90 335.9 559 37.4
PGR142G1152 Punica granatum HOM05D004671 ORTHO05D005638 1.8e-89 334.3 569 38.1
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 6.7e-89 332.4 559 37.2
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 1.5e-88 331.3 565 36.5
TWI14G0685 Tripterygium wilfordii HOM05D004671 ORTHO05D005638 7.4e-88 328.9 566 37.3
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 2.8e-87 327.0 561 35.8
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 6.2e-87 325.9 457 40.7
Phvul.007G071300 Phaseolus vulgaris HOM05D004671 ORTHO05D005638 6.2e-87 325.9 568 38.2
Aqoxy3G03421 Aquilegia oxysepala HOM05D004671 ORTHO05D005638 1.1e-86 325.1 568 37.3
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 1.1e-86 325.1 569 37.6
Glyma.20G159500 Glycine max HOM05D004671 ORTHO05D005638 4.0e-86 323.2 564 38.3
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 9.0e-86 322.0 566 37.6
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.2e-85 321.6 573 37.3
GSVIVG01017918001 Vitis vinifera HOM05D004671 ORTHO05D005638 1.5e-85 321.2 566 37.6
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 2.6e-85 320.5 565 36.5
CsaV3_3G017180 Cucumis sativus L. HOM05D004671 ORTHO05D005638 2.6e-85 320.5 562 36.3
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 3.4e-85 320.1 576 37.3
VMungo0720G2100 Vigna mungo HOM05D004671 ORTHO05D005638 4.5e-85 319.7 564 37.6
ClCG05G008100 Citrullus lanatus HOM05D004671 ORTHO05D005638 5.8e-85 319.3 576 36.6
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 7.6e-85 318.9 560 33.9
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 9.9e-85 318.5 575 37.0
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.3e-84 318.2 584 37.5
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 1.3e-84 318.2 578 37.0
SMO276G0042 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 1.3e-84 318.2 457 42.0
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 1.7e-84 317.8 598 35.6
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 4.9e-84 316.2 573 37.2
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 6.4e-84 315.8 567 35.6
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.1e-83 315.1 573 37.0
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 1.4e-83 314.7 565 35.8
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 1.4e-83 314.7 566 37.8
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 4.2e-83 313.2 563 36.9
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 5.5e-83 312.8 564 34.8
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 1.2e-82 311.6 573 36.1
vmacro21316 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 1.2e-82 311.6 567 35.8
MD01G1202100 Malus domestica HOM05D004671 ORTHO05D005638 4.6e-82 309.7 565 36.8
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 7.9e-82 308.9 574 35.4
MD07G1271200 Malus domestica HOM05D004671 ORTHO05D005638 1.0e-81 308.5 568 36.3
Ca_10754_v3 Cicer arietinum L. HOM05D004671 ORTHO05D005638 2.3e-81 307.4 572 36.0
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 2.3e-81 307.4 564 37.6
SHI26612 Sapria himalayana HOM05D004671 ORTHO05D005638 3.9e-81 306.6 564 34.6
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 5.1e-81 306.2 533 36.6
Thhalv10010290m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 5.1e-81 306.2 562 35.1
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 4.3e-80 303.1 562 36.1
Prupe.2G295500 Prunus persica HOM05D004671 ORTHO05D005638 5.6e-80 302.8 563 35.9
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 9.6e-80 302.0 592 33.8
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 9.6e-80 302.0 562 37.2
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 1.3e-79 301.6 524 38.0
Aa31LG4G17500 Aethionema arabicum HOM05D004671 ORTHO05D005638 1.6e-79 301.2 562 34.3
AL6G42740 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 4.8e-79 299.7 552 34.8
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 2.4e-78 297.4 634 33.9
PSO017G5643 Papaver somniferum HOM05D004671 ORTHO05D005638 6.9e-78 295.8 564 35.1
AUR62015967 Chenopodium quinoa HOM05D004671 ORTHO05D005638 1.5e-77 294.7 581 34.1
Psat6g198360 Pisum sativum HOM05D004671 ORTHO05D005638 2.0e-77 294.3 564 34.8
SalBow1G2445 Salvia bowleyana HOM05D004671 ORTHO05D005638 2.0e-77 294.3 562 35.4
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 2.0e-77 294.3 559 34.7
BcaC01g02382 Brassica carinata HOM05D004671 ORTHO05D005638 2.6e-77 293.9 564 34.6
BolC3t18845H Brassica oleracea HOM05D004671 ORTHO05D005638 2.6e-77 293.9 564 34.6
PSO063G7539 Papaver somniferum HOM05D004671 ORTHO05D005638 4.5e-77 293.1 564 35.1
C03p65870 Brassica napus HOM05D004671 ORTHO05D005638 5.8e-77 292.7 564 34.4
Sp5g13050 Schrenkiella parvula HOM05D004671 ORTHO05D005638 7.6e-77 292.4 562 34.5
AL5G28510 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 1.3e-76 291.6 552 34.4
Thhalv10003189m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 1.3e-76 291.6 560 33.4
AT3G49000 Arabidopsis thaliana HOM05D004671 ORTHO05D005638 4.9e-76 289.7 553 33.8
Carub.0005s1517 Capsella rubella HOM05D004671 ORTHO05D005638 4.9e-76 289.7 565 34.2
SalBow1G5895 Salvia bowleyana HOM05D004671 ORTHO05D005638 6.5e-76 289.3 572 35.0
TPR.G27007 Trifolium pratense HOM05D004671 ORTHO05D005638 1.4e-75 288.1 565 34.7
SMO143G0293 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 1.9e-75 287.7 516 37.8
CARHR157820 Cardamine hirsuta HOM05D004671 ORTHO05D005638 2.5e-75 287.3 563 33.9
HPP92_020192 Vanilla planifolia HOM05D004671 ORTHO05D005638 2.1e-74 284.3 556 34.4
BcaB02g09572 Brassica carinata HOM05D004671 ORTHO05D005638 1.0e-73 282.0 563 33.7
BraA06t25741Z Brassica rapa HOM05D004671 ORTHO05D005638 2.3e-73 280.8 565 34.2
A06p28000 Brassica napus HOM05D004671 ORTHO05D005638 3.0e-73 280.4 565 34.0
Lj5g0019412 Lotus japonicus HOM05D004671 ORTHO05D005638 4.3e-72 276.6 562 35.8
Medtr1g101100 Medicago truncatula HOM05D004671 ORTHO05D005638 7.4e-72 275.8 564 32.8
Hund04757 Selenicereus undatus HOM05D004671 ORTHO05D005638 9.7e-72 275.4 560 34.3
RcHm_v2.0_Chr6g0258831 Rosa chinensis HOM05D004671 ORTHO05D005638 2.6e-69 267.3 574 32.9
Ah.13g068640 Amaranthus hybridus HOM05D004671 ORTHO05D005638 5.0e-68 263.1 559 33.6
Sed0007536 Sechium edule HOM05D004671 ORTHO05D005638 8.5e-68 262.3 456 37.1
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 4.6e-66 256.5 541 35.5
Carub.0004s0531 Capsella rubella HOM05D004671 ORTHO05D005638 3.7e-63 246.9 560 31.8
MELO3C031814.2 Cucumis melo HOM05D004671 ORTHO05D005638 1.1e-62 245.4 499 34.7
AUR62021173 Chenopodium quinoa HOM05D004671 ORTHO05D005638 6.9e-62 242.7 558 32.3
Zm00001eb160040 Zea mays HOM05D004671 ORTHO05D005638 1.2e-61 241.9 567 31.7
Cre16.g673900 Chlamydomonas reinhardtii HOM05D004671 ORTHO05D005638 6.5e-60 236.1 660 27.9
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 1.2e-58 231.9 732 29.6
Nitab4.5_0000080g0100 Nicotiana tabacum HOM05D004671 ORTHO05D005638 1.2e-58 231.9 572 31.6
Os01g0679000 Oryza sativa ssp. japonica HOM05D004671 ORTHO05D005638 4.8e-55 219.9 492 31.3
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 6.3e-55 219.5 569 31.5
Sc13g0008680 Simmondsia chinensis HOM05D004671 ORTHO05D005638 1.4e-54 218.4 482 35.1
CDE04G3622 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 2.4e-54 217.6 364 38.7
Sed0027520 Sechium edule HOM05D004671 ORTHO05D005638 1.5e-53 214.9 448 32.6
Solyc06g036000.4 Solanum lycopersicum HOM05D004671 ORTHO05D005638 2.6e-53 214.2 416 37.3
Peaxi162Scf00848g00012 Petunia axillaris HOM05D004671 ORTHO05D005638 3.5e-53 213.8 413 36.6
Sopen06g011780 Solanum pennellii HOM05D004671 ORTHO05D005638 2.4e-46 191.0 358 37.4
arahy.Tifrunner.gnm1.ann1.R5FQEP Arachis hypogaea HOM05D004671 ORTHO05D005638 1.7e-44 184.9 440 32.7
QL09p013914 Quercus lobata HOM05D004671 ORTHO05D005638 9.4e-43 179.1 271 40.2
CBR_g5701 Chara braunii HOM05D004671 ORTHO05D005638 2.7e-42 177.6 193 45.6
MCO01G383 Micromonas commoda HOM05D004671 ORTHO05D005638 7.0e-38 162.9 561 25.7
CBR_g5700 Chara braunii HOM05D004671 ORTHO05D005638 5.0e-36 156.8 187 43.9
CDE04G1371 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 6.5e-36 156.4 163 46.0
CSS0016908 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 5.5e-35 153.3 147 49.7
arahy.Tifrunner.gnm1.ann1.4LKL39 Arachis hypogaea HOM05D004671 ORTHO05D005638 1.2e-34 152.1 358 31.6
CSS0035516 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 3.6e-34 150.6 267 39.0
Oeu002719.1 Olea europaea HOM05D004671 ORTHO05D005638 1.8e-33 148.3 279 36.2
Ah.13g076510 Amaranthus hybridus HOM05D004671 ORTHO05D007692 4.4e-32 143.7 468 26.9
MD07G1271300 Malus domestica HOM05D004671 ORTHO05D005638 5.7e-32 143.3 278 32.7
Migut.K01220 Erythranthe guttata HOM05D004671 ORTHO05D005638 5.9e-29 133.3 260 36.9
HanXRQChr06g0163701 Helianthus annuus HOM05D001754 ORTHO05D005638 9.5e-27 125.9 343 30.6
Zm00001eb440850 Zea mays HOM05D004671 ORTHO05D005638 3.6e-26 124.0 182 42.9
Oeu004097.1 Olea europaea HOM05D004671 ORTHO05D005638 7.5e-24 116.3 239 33.5
Glyma.20G157700 Glycine max HOM05D004671 ORTHO05D005638 9.2e-22 109.4 156 41.0
Glyma.12G162990 Glycine max HOM05D004671 ORTHO05D005638 4.5e-21 107.1 147 43.5
Cre11.g476376 Chlamydomonas reinhardtii HOM05D030013 ORTHO05D028799 3.9e-20 104.0 177 33.9
CBR_g26425 Chara braunii HOM05D004671 ORTHO05D005638 6.6e-20 103.2 113 46.0
CAN.G527.1 Capsicum annuum HOM05D004671 ORTHO05D005638 2.3e-17 94.7 242 29.8
Peaxi162Scf00848g00015 Petunia axillaris HOM05D004671 ORTHO05D005638 9.8e-16 89.4 135 37.8
BolC8t50021H Brassica oleracea HOM05D004671 ORTHO05D005638 4.1e-14 84.0 172 31.4
C08p23970 Brassica napus HOM05D004671 ORTHO05D005638 7.0e-14 83.2 172 32.0
BcaC07g39376 Brassica carinata HOM05D004671 ORTHO05D005638 3.9e-12 77.4 167 31.1
BcaB01g00761 Brassica carinata HOM05D004671 ORTHO05D005638 2.3e-09 68.2 220 23.6
SEGI_00380 Sequoiadendron giganteum HOM05D004671 ORTHO05D005638 1.1e-06 59.3 67 43.3
AL5G14400 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 4.1e-06 57.4 255 24.7


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