Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 0.0e+00 1116.7 549 100.0
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 2.2e-230 802.4 550 71.8
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 2.3e-110 403.7 571 39.6
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 1.5e-101 374.4 559 37.9
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 2.6e-101 373.6 571 38.7
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 7.4e-101 372.1 535 38.1
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 2.2e-100 370.5 492 39.8
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 2.8e-100 370.2 559 36.7
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 3.1e-99 366.7 564 38.3
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 4.1e-99 366.3 532 37.8
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 9.1e-99 365.2 562 37.4
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 1.2e-98 364.8 559 36.3
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 3.5e-98 363.2 558 37.1
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 4.5e-98 362.8 532 36.7
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 2.2e-97 360.5 559 36.1
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 5.0e-97 359.4 548 35.8
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 1.5e-96 357.8 485 39.6
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 1.5e-96 357.8 544 38.1
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 3.2e-96 356.7 557 36.6
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 3.2e-96 356.7 558 38.4
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 4.2e-96 356.3 560 38.2
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 1.6e-95 354.4 557 37.2
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 2.1e-95 354.0 521 37.2
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 2.7e-95 353.6 521 36.9
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 2.7e-95 353.6 557 36.3
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 2.7e-95 353.6 560 36.4
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 3.6e-95 353.2 559 36.7
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 4.7e-95 352.8 557 36.6
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 8.0e-95 352.1 560 35.4
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 1.0e-94 351.7 532 36.7
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 1.0e-94 351.7 556 35.8
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 1.4e-94 351.3 559 36.9
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 3.0e-94 350.1 564 36.7
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 3.9e-94 349.7 558 36.0
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 3.9e-94 349.7 570 36.7
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 3.9e-94 349.7 559 35.8
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 6.7e-94 349.0 494 39.1
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 8.8e-94 348.6 556 36.9
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 1.1e-93 348.2 566 36.4
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 1.5e-93 347.8 563 37.1
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 2.6e-93 347.1 562 34.9
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 2.6e-93 347.1 557 35.9
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 4.4e-93 346.3 565 36.8
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 5.7e-93 345.9 568 34.7
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 5.7e-93 345.9 559 35.2
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 5.7e-93 345.9 564 36.9
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 7.4e-93 345.5 559 35.1
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 7.4e-93 345.5 570 36.3
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 7.4e-93 345.5 559 36.3
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 9.7e-93 345.1 560 34.3
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 9.7e-93 345.1 559 35.4
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 1.7e-92 344.4 568 37.7
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 1.7e-92 344.4 565 36.3
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 2.2e-92 344.0 559 34.9
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 3.7e-92 343.2 564 36.7
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 4.8e-92 342.8 563 34.8
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 6.3e-92 342.4 558 34.9
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 6.3e-92 342.4 558 36.6
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 6.3e-92 342.4 507 38.7
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 8.2e-92 342.0 562 36.8
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 8.2e-92 342.0 559 36.5
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 1.1e-91 341.7 564 37.1
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.4e-91 341.3 558 35.3
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 1.8e-91 340.9 559 35.4
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 2.4e-91 340.5 544 35.7
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 2.4e-91 340.5 558 36.2
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 4.1e-91 339.7 559 36.1
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 4.1e-91 339.7 558 35.7
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 5.3e-91 339.3 562 35.9
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 7.0e-91 339.0 561 34.2
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 7.0e-91 339.0 592 34.6
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 7.0e-91 339.0 509 36.5
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 9.1e-91 338.6 560 36.2
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 2.6e-90 337.0 560 36.4
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 4.5e-90 336.3 561 34.2
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 5.9e-90 335.9 559 33.6
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 5.9e-90 335.9 560 36.4
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 7.7e-90 335.5 561 34.6
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 1.0e-89 335.1 580 34.3
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 1.3e-89 334.7 556 36.5
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 1.3e-89 334.7 586 36.5
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 2.2e-89 334.0 472 37.9
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 2.2e-89 334.0 560 35.5
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 1.9e-88 330.9 561 34.2
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 2.5e-88 330.5 559 33.8
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 1.6e-87 327.8 559 34.5
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 2.1e-87 327.4 598 36.1
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 2.7e-87 327.0 557 32.3
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 2.0e-85 320.9 560 33.4
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 7.5e-85 318.9 606 34.8
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 9.8e-85 318.5 557 33.9
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 1.8e-83 314.3 482 36.5
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 2.4e-83 313.9 442 39.1
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 1.0e-81 308.5 568 34.3
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 1.0e-81 308.5 492 37.4
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 1.7e-81 307.8 493 36.7
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 5.0e-81 306.2 563 34.6
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 5.5e-80 302.8 559 32.0
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 4.0e-78 296.6 356 43.8
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 2.0e-77 294.3 639 31.9
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 3.4e-77 293.5 490 34.3
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 3.7e-76 290.0 563 32.5
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 4.2e-72 276.6 328 43.3
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 3.2e-67 260.4 490 32.0
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 2.8e-55 220.7 473 32.8
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 3.7e-52 210.3 224 49.1
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 4.7e-47 193.4 411 30.9
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 2.2e-36 157.9 223 37.7
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 1.6e-26 125.2 106 51.9
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 2.4e-19 101.3 198 32.3
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.8e-17 95.1 76 56.6
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 7.4e-08 63.2 60 48.3
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 2.4e-06 58.2 113 25.7


User provided reference genes

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