Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c16_7000 Physcomitrium patens HOM05D006935 ORTHO05D008944 5.3e-212 740.7 368 100.0
PGR083G2867 Punica granatum HOM05D006935 ORTHO05D008944 1.2e-94 350.9 257 67.7
Thecc.03G010500 Theobroma cacao HOM05D006935 ORTHO05D008944 7.7e-94 348.2 244 69.3
Aqoxy3G02966 Aquilegia oxysepala HOM05D006935 ORTHO05D008944 1.7e-93 347.1 253 67.6
Rhsim08G0171100 Rhododendron simsii HOM05D006935 ORTHO05D008944 5.0e-93 345.5 243 68.3
VMungo1215G2532 Vigna mungo HOM05D006935 ORTHO05D008944 5.0e-93 345.5 245 68.6
Glyma.05G036900 Glycine max HOM05D006935 ORTHO05D008944 6.5e-93 345.1 245 67.8
CSS0041391 Camellia sinensis var. sinensis HOM05D006935 ORTHO05D008944 8.5e-93 344.7 240 69.6
CiPaw.11G027700 Carya illinoinensis HOM05D006935 ORTHO05D008944 1.1e-92 344.4 246 67.9
Manes.06G104000 Manihot esculenta HOM05D006935 ORTHO05D008944 1.1e-92 344.4 240 70.4
MSTRG.11442 Avicennia marina HOM05D006935 ORTHO05D008944 1.5e-92 344.0 261 64.8
Migut.I00022 Erythranthe guttata HOM05D006935 ORTHO05D008944 1.5e-92 344.0 254 66.9
TPR.G37522 Trifolium pratense HOM05D006935 ORTHO05D008944 1.5e-92 344.0 243 70.0
SEGI_12501 Sequoiadendron giganteum HOM05D006935 ORTHO05D008944 1.9e-92 343.6 242 67.8
Aa31LG11G860 Aethionema arabicum HOM05D006935 ORTHO05D008944 3.2e-92 342.8 248 66.5
CANSAT80G0279 Cannabis sativa HOM05D006935 ORTHO05D008944 4.2e-92 342.4 243 67.9
Duzib068G1137 Durio zibethinus HOM05D006935 ORTHO05D008944 7.2e-92 341.7 244 68.4
Lj4g0026943 Lotus japonicus HOM05D006935 ORTHO05D008944 7.2e-92 341.7 245 68.2
Actinidia19311 Actinidia chinensis HOM05D006935 ORTHO05D008944 9.4e-92 341.3 240 68.8
Medtr4g106970 Medicago truncatula HOM05D006935 ORTHO05D008944 9.4e-92 341.3 245 69.4
Nn4g22789 Nelumbo nucifera HOM05D006935 ORTHO05D008944 9.4e-92 341.3 251 67.7
Phvul.003G199600 Phaseolus vulgaris HOM05D006935 ORTHO05D008944 9.4e-92 341.3 245 67.8
vmacro19376 Vaccinium macrocarpon HOM05D006935 ORTHO05D008944 9.4e-92 341.3 241 67.6
FvH4_5g05200 Fragaria vesca HOM05D006935 ORTHO05D008944 1.6e-91 340.5 239 69.0
AT5G62840 Arabidopsis thaliana HOM05D006935 ORTHO05D008944 2.1e-91 340.1 238 69.7
COL.COLO4_04599 Corchorus olitorius HOM05D006935 ORTHO05D008944 2.1e-91 340.1 240 69.6
Thhalv10004703m.g Eutrema salsugineum HOM05D006935 ORTHO05D008944 3.6e-91 339.3 238 68.9
Lsat_1_v5_gn_5_17180 Lactuca sativa HOM05D006935 ORTHO05D008944 4.7e-91 339.0 240 67.1
QL10p011920 Quercus lobata HOM05D006935 ORTHO05D008944 4.7e-91 339.0 244 67.2
Sp2g25990 Schrenkiella parvula HOM05D006935 ORTHO05D008944 4.7e-91 339.0 245 68.2
BcaC01g02525 Brassica carinata HOM05D006935 ORTHO05D008944 6.1e-91 338.6 237 69.2
C03p63900 Brassica napus HOM05D006935 ORTHO05D008944 6.1e-91 338.6 237 69.2
BolC3t18645H Brassica oleracea HOM05D006935 ORTHO05D008944 6.1e-91 338.6 237 69.2
Potri.015G074700 Populus trichocarpa HOM05D006935 ORTHO05D008944 6.1e-91 338.6 244 68.9
TAR622G0425 Trochodendron aralioides HOM05D006935 ORTHO05D008944 6.1e-91 338.6 230 70.9
AL8G39840 Arabidopsis lyrata HOM05D006935 ORTHO05D008944 8.0e-91 338.2 238 69.3
GSVIVG01007766001 Vitis vinifera HOM05D006935 ORTHO05D008944 8.0e-91 338.2 240 68.8
BcaB02g09696 Brassica carinata HOM05D006935 ORTHO05D008944 1.0e-90 337.8 237 68.8
Carub.0008s2355 Capsella rubella HOM05D006935 ORTHO05D008944 1.0e-90 337.8 246 67.5
Eucgr.B00368 Eucalyptus grandis HOM05D006935 ORTHO05D008944 1.0e-90 337.8 241 68.0
Atru.chr9.2451 Acer truncatum HOM05D006935 ORTHO05D008944 1.4e-90 337.4 238 71.0
RcHm_v2.0_Chr7g0193711 Rosa chinensis HOM05D006935 ORTHO05D008944 1.4e-90 337.4 238 68.9
Sopen03g033350 Solanum pennellii HOM05D006935 ORTHO05D008944 1.4e-90 337.4 240 67.5
BraA06t25905Z Brassica rapa HOM05D006935 ORTHO05D008944 1.8e-90 337.0 237 68.4
MD14G1182500 Malus domestica HOM05D006935 ORTHO05D008944 1.8e-90 337.0 239 68.2
A06p29590 Brassica napus HOM05D006935 ORTHO05D008944 2.3e-90 336.7 237 67.9
SGA_v2.0_scaffold90G27953 Striga asiatica HOM05D006935 ORTHO05D008944 2.3e-90 336.7 242 67.4
THA.LOC104798977 Tarenaya hassleriana HOM05D006935 ORTHO05D008944 2.3e-90 336.7 239 69.5
CARHR276620 Cardamine hirsuta HOM05D006935 ORTHO05D008944 3.0e-90 336.3 238 68.9
CsaV3_1G008420 Cucumis sativus L. HOM05D006935 ORTHO05D008944 3.0e-90 336.3 238 69.7
PGSC0003DMG400024494 Solanum tuberosum HOM05D006935 ORTHO05D008944 3.0e-90 336.3 240 66.7
Sabra15G0098700 Salix brachista HOM05D006935 ORTHO05D008944 5.2e-90 335.5 244 68.0
Cpa.g.sc124.48 Carica papaya HOM05D006935 ORTHO05D008944 6.7e-90 335.1 250 66.4
HanXRQChr16g0517271 Helianthus annuus HOM05D006935 ORTHO05D008944 8.8e-90 334.7 240 67.1
Sc12g0005390 Simmondsia chinensis HOM05D006935 ORTHO05D008944 8.8e-90 334.7 240 69.2
Solyc03g114250.4 Solanum lycopersicum HOM05D006935 ORTHO05D008944 8.8e-90 334.7 233 68.2
Gohir.D11G001000 Gossypium hirsutum HOM05D006935 ORTHO05D008944 1.2e-89 334.3 244 65.6
Gorai.007G001900 Gossypium raimondii HOM05D006935 ORTHO05D008944 1.2e-89 334.3 244 65.6
SalBow5G1860 Salvia bowleyana HOM05D006935 ORTHO05D008944 1.5e-89 334.0 256 65.6
unitig_749.g13472 Utricularia gibba HOM05D006935 ORTHO05D008944 1.5e-89 334.0 260 64.2
Cc04_g13740 Coffea canephora HOM05D006935 ORTHO05D008944 2.0e-89 333.6 267 62.5
ECA236G1157 Erigeron canadensis HOM05D006935 ORTHO05D008944 2.6e-89 333.2 252 64.7
Ciclev10021410m.g Citrus clementina HOM05D006935 ORTHO05D008944 3.3e-89 332.8 238 68.1
Lalb_Chr07g0182691 Lupinus albus HOM05D006935 ORTHO05D008944 3.3e-89 332.8 238 69.3
Haze_07457 Corylus avellana HOM05D006935 ORTHO05D008944 4.4e-89 332.4 240 67.5
Gohir.A11G001400 Gossypium hirsutum HOM05D006935 ORTHO05D008944 7.5e-89 331.6 244 65.2
ClCG01G013080 Citrullus lanatus HOM05D006935 ORTHO05D008944 2.2e-88 330.1 229 69.9
FAN18G4193 Fragaria x ananassa HOM05D006935 ORTHO05D004872 2.8e-88 329.7 227 70.0
Nitab4.5_0000852g0050 Nicotiana tabacum HOM05D006935 ORTHO05D008944 2.8e-88 329.7 253 65.6
TWI81G0925 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 2.8e-88 329.7 240 67.9
TWI81G0947 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 2.8e-88 329.7 240 67.9
FAN04G2667 Fragaria x ananassa HOM05D006935 ORTHO05D008944 4.8e-88 328.9 226 70.4
MELO3C002259.2 Cucumis melo HOM05D006935 ORTHO05D008944 6.3e-88 328.6 231 69.7
Nitab4.5_0005862g0020 Nicotiana tabacum HOM05D006935 ORTHO05D008944 1.1e-87 327.8 294 58.2
PSO302G0172 Papaver somniferum HOM05D006935 ORTHO05D008944 1.4e-87 327.4 255 66.3
Mapoly0091s0071 Marchantia polymorpha HOM05D006935 ORTHO05D008944 9.1e-87 324.7 274 60.2
Ah.02g110460 Amaranthus hybridus HOM05D006935 ORTHO05D008944 2.7e-86 323.2 238 65.5
Cfa019105 Carpinus fangiana HOM05D006935 ORTHO05D004872 1.3e-85 320.9 234 67.1
EL10Ac5g10748 Beta vulgaris HOM05D006935 ORTHO05D008944 8.5e-85 318.2 230 66.1
MBI16_g05651_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 8.5e-85 318.2 230 66.5
CDE04G2457 Ceratophyllum demersum HOM05D005049 ORTHO05D004872 7.2e-84 315.1 226 65.9
Os01g0660900 Oryza sativa ssp. japonica HOM05D006935 ORTHO05D008944 1.2e-83 314.3 239 65.7
AUR62008221 Chenopodium quinoa HOM05D006935 ORTHO05D008944 2.1e-83 313.5 240 64.6
Hund09430 Selenicereus undatus HOM05D006935 ORTHO05D004872 2.1e-83 313.5 238 64.3
Zm00001eb359580 Zea mays HOM05D006935 ORTHO05D008944 3.6e-83 312.8 238 66.8
HPP92_024712 Vanilla planifolia HOM05D006935 ORTHO05D008944 6.1e-83 312.0 230 67.0
Dinv09149 Davidia involucrata HOM05D006935 ORTHO05D008944 1.4e-82 310.8 210 71.4
Ca_21910_v3 Cicer arietinum L. HOM05D006935 ORTHO05D008944 3.0e-82 309.7 206 73.8
MBI16_g32800_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 1.2e-81 307.8 248 62.1
Psat4g057680 Pisum sativum HOM05D006935 ORTHO05D008944 2.0e-81 307.0 212 71.2
CAN.G781.17 Capsicum annuum HOM05D006935 ORTHO05D008944 4.4e-81 305.8 219 68.0
Peaxi162Scf00017g02821 Petunia axillaris HOM05D006935 ORTHO05D008944 4.4e-81 305.8 235 65.1
AagrBONN_evm.TU.Sc2ySwM_117.38 Anthoceros agrestis HOM05D006935 ORTHO05D008944 7.0e-79 298.5 205 73.2
AUR62030975 Chenopodium quinoa HOM05D006935 ORTHO05D008944 9.1e-79 298.1 233 62.7
Oeu016368.1 Olea europaea HOM05D006935 ORTHO05D008944 9.5e-76 288.1 260 58.1
SMO141G0200 Selaginella moellendorffii HOM05D006935 ORTHO05D008944 1.4e-74 284.3 183 77.0
FAN08G3443 Fragaria x ananassa HOM05D006935 ORTHO05D004872 1.2e-65 254.6 175 72.0
ATR0730G238 Amborella trichopoda HOM05D006935 ORTHO05D008944 4.4e-65 252.7 276 51.4
Peaxi162Scf00017g02830 Petunia axillaris HOM05D006935 ORTHO05D008944 6.6e-61 238.8 207 58.0
Cre06.g272300 Chlamydomonas reinhardtii HOM05D006935 ORTHO05D008944 2.6e-57 226.9 244 49.6
EL10Ac5g10761 Beta vulgaris HOM05D006935 ORTHO05D008944 1.7e-53 214.2 221 52.0
Hma1.2p1_0176F.1_g077560 Hydrangea macrophylla HOM05D006935 ORTHO05D008944 8.9e-50 201.8 147 68.7
Sed0005822 Sechium edule HOM05D006935 ORTHO05D008944 1.2e-49 201.4 130 73.8
Prupe.5G175000 Prunus persica HOM05D006935 ORTHO05D008944 5.1e-45 186.0 138 65.2
Actinidia20183 Actinidia chinensis HOM05D006935 ORTHO05D008944 7.1e-39 165.6 118 67.8
Lj5C123T7 Lonicera japonica HOM05D006935 ORTHO05D008944 4.3e-36 156.4 108 67.6
Psat4g057640 Pisum sativum HOM05D006935 ORTHO05D008944 4.7e-35 152.9 103 70.9
arahy.Tifrunner.gnm1.ann1.0F4FSZ Arachis hypogaea HOM05D006935 ORTHO05D008944 4.4e-33 146.4 107 65.4
arahy.Tifrunner.gnm1.ann1.209TGD Arachis hypogaea HOM05D006935 ORTHO05D008944 7.6e-33 145.6 107 65.4
MD06G1175700 Malus domestica HOM05D006935 ORTHO05D008944 3.0e-21 107.1 110 50.0
PRCOL_00001554 Prasinoderma coloniale HOM05D006935 ORTHO05D008944 6.7e-21 105.9 211 36.5
Lj5C123T8 Lonicera japonica HOM05D006935 ORTHO05D008944 3.7e-19 100.1 76 61.8
MCO16G270 Micromonas commoda HOM05D006935 ORTHO05D008944 5.8e-17 92.8 209 32.5
Actinidia01759 Actinidia chinensis HOM05D006935 ORTHO05D008944 3.3e-12 77.0 63 61.9
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 6.5e-08 62.8 203 28.1
Hund09427 Selenicereus undatus HOM05D006935 ORTHO05D008944 2.5e-07 60.8 43 65.1


User provided reference genes

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