Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c16_3280 Physcomitrium patens HOM05D005102 ORTHO05D006090 1.8e-134 482.6 254 100.0
Pp3c27_3370 Physcomitrium patens HOM05D005102 ORTHO05D006090 1.7e-87 326.6 250 74.8
ATR0787G185 Amborella trichopoda HOM05D005102 ORTHO05D006090 1.6e-37 160.6 236 41.1
AagrBONN_evm.TU.Sc2ySwM_228.1541 Anthoceros agrestis HOM05D005102 ORTHO05D006090 2.7e-37 159.8 232 40.9
SEGI_01035 Sequoiadendron giganteum HOM05D005102 ORTHO05D006090 3.5e-37 159.5 234 40.2
AagrBONN_evm.TU.Sc2ySwM_368.1701 Anthoceros agrestis HOM05D005102 ORTHO05D006090 7.8e-37 158.3 232 40.5
Mapoly0019s0137 Marchantia polymorpha HOM05D005102 ORTHO05D006090 1.9e-35 153.7 217 40.6
DCAR_030764 Daucus carota HOM05D005102 ORTHO05D006090 7.3e-35 151.8 232 38.4
CDE09G0962 Ceratophyllum demersum HOM05D005102 ORTHO05D006090 1.6e-34 150.6 229 40.2
Nn3g19843 Nelumbo nucifera HOM05D005102 ORTHO05D006090 2.1e-34 150.2 233 39.5
Actinidia37761 Actinidia chinensis HOM05D005102 ORTHO05D006090 3.6e-34 149.4 234 41.5
Dinv27121 Davidia involucrata HOM05D005102 ORTHO05D006090 4.7e-34 149.1 223 40.4
PSO302G0040 Papaver somniferum HOM05D005102 ORTHO05D006090 6.2e-34 148.7 239 38.9
HPP92_021768 Vanilla planifolia HOM05D005102 ORTHO05D006090 6.2e-34 148.7 233 39.9
Manes.03G102500 Manihot esculenta HOM05D005102 ORTHO05D006090 1.4e-33 147.5 222 40.1
CDE02G3615 Ceratophyllum demersum HOM05D005102 ORTHO05D006090 2.3e-33 146.7 234 39.3
PSO170G5569 Papaver somniferum HOM05D005102 ORTHO05D006090 2.3e-33 146.7 239 38.5
Prupe.5G230500 Prunus persica HOM05D005102 ORTHO05D006090 2.3e-33 146.7 227 40.1
Glyma.15G125200 Glycine max HOM05D005102 ORTHO05D006090 3.1e-33 146.4 229 38.4
COL.COLO4_15983 Corchorus olitorius HOM05D005102 ORTHO05D006090 5.2e-33 145.6 223 40.4
QL06p021548 Quercus lobata HOM05D005102 ORTHO05D006090 5.2e-33 145.6 231 39.8
Aqoxy5G00133 Aquilegia oxysepala HOM05D005102 ORTHO05D006090 8.9e-33 144.8 232 37.9
Lj3g0001784 Lotus japonicus HOM05D005102 ORTHO05D006090 8.9e-33 144.8 229 39.7
Lj6g0009036 Lotus japonicus HOM05D005102 ORTHO05D006090 8.9e-33 144.8 229 39.7
Os02g0658900 Oryza sativa ssp. japonica HOM05D005102 ORTHO05D006090 8.9e-33 144.8 224 40.2
CiPaw.01G176900 Carya illinoinensis HOM05D005102 ORTHO05D006090 1.2e-32 144.4 231 41.1
PSO764G0108 Papaver somniferum HOM05D005102 ORTHO05D006090 1.2e-32 144.4 236 37.7
TWI09G0526 Tripterygium wilfordii HOM05D005102 ORTHO05D006090 1.2e-32 144.4 218 39.9
EL10Ac3g06678 Beta vulgaris HOM05D005102 ORTHO05D006090 1.5e-32 144.1 224 38.4
PSO832G1873 Papaver somniferum HOM05D005102 ORTHO05D006090 2.0e-32 143.7 234 37.6
Zm00001eb238020 Zea mays HOM05D005102 ORTHO05D006090 2.6e-32 143.3 224 37.9
Ah.10g026170 Amaranthus hybridus HOM05D005102 ORTHO05D006090 3.4e-32 142.9 224 39.3
Psat7g046400 Pisum sativum HOM05D005102 ORTHO05D006090 3.4e-32 142.9 230 39.1
FAN13G1436 Fragaria x ananassa HOM05D005102 ORTHO05D006090 4.4e-32 142.5 223 39.0
FAN18G4219 Fragaria x ananassa HOM05D005102 ORTHO05D006090 4.4e-32 142.5 223 39.5
Phvul.006G133300 Phaseolus vulgaris HOM05D005102 ORTHO05D006090 4.4e-32 142.5 229 38.0
Ciclev10005541m.g Citrus clementina HOM05D005102 ORTHO05D006090 7.6e-32 141.7 234 38.5
FAN08G3625 Fragaria x ananassa HOM05D005102 ORTHO05D006090 7.6e-32 141.7 223 39.0
TPR.G17506 Trifolium pratense HOM05D005102 ORTHO05D006090 7.6e-32 141.7 242 37.2
Ca_11361_v3 Cicer arietinum L. HOM05D005102 ORTHO05D006090 1.3e-31 141.0 230 38.3
FvH4_5g17100 Fragaria vesca HOM05D005102 ORTHO05D006090 1.3e-31 141.0 223 39.0
QL08p018871 Quercus lobata HOM05D005102 ORTHO05D006090 1.7e-31 140.6 233 39.1
FAN04G2658 Fragaria x ananassa HOM05D005102 ORTHO05D006090 2.2e-31 140.2 223 38.6
Solyc09g090860.4 Solanum lycopersicum HOM05D005102 ORTHO05D006090 2.9e-31 139.8 192 42.2
Cfa014795 Carpinus fangiana HOM05D005102 ORTHO05D006090 3.8e-31 139.4 223 37.7
Nitab4.5_0001041g0140 Nicotiana tabacum HOM05D005102 ORTHO05D006090 3.8e-31 139.4 230 37.4
Haze_11479 Corylus avellana HOM05D005102 ORTHO05D006090 4.9e-31 139.0 217 38.7
Duzib052G0859 Durio zibethinus HOM05D005102 ORTHO05D006090 4.9e-31 139.0 223 39.5
Psat1g170520 Pisum sativum HOM05D005102 ORTHO05D006090 4.9e-31 139.0 230 38.7
Thecc.04G266700 Theobroma cacao HOM05D005102 ORTHO05D006090 4.9e-31 139.0 223 39.9
VMungo0540G0767 Vigna mungo HOM05D005102 ORTHO05D006090 4.9e-31 139.0 229 37.1
Glyma.09G019100 Glycine max HOM05D005102 ORTHO05D006090 6.4e-31 138.7 229 38.0
CAN.G812.17 Capsicum annuum HOM05D005102 ORTHO05D006090 1.4e-30 137.5 192 41.7
AUR62018036 Chenopodium quinoa HOM05D005102 ORTHO05D006090 1.9e-30 137.1 229 35.8
Eucgr.K00416 Eucalyptus grandis HOM05D005102 ORTHO05D006090 1.9e-30 137.1 223 38.1
TAR365G0288 Trochodendron aralioides HOM05D005102 ORTHO05D006090 1.9e-30 137.1 227 37.4
Sopen09g033820 Solanum pennellii HOM05D005102 ORTHO05D006090 2.4e-30 136.7 192 41.7
Gohir.D02G049200 Gossypium hirsutum HOM05D005102 ORTHO05D006090 3.2e-30 136.3 229 36.7
HanXRQChr01g0011201 Helianthus annuus HOM05D005102 ORTHO05D006090 3.2e-30 136.3 230 37.0
CANSAT78G2207 Cannabis sativa HOM05D005102 ORTHO05D006090 4.1e-30 136.0 236 35.6
Gorai.005G054400 Gossypium raimondii HOM05D005102 ORTHO05D006090 4.1e-30 136.0 223 38.6
Migut.G00562 Erythranthe guttata HOM05D005102 ORTHO05D006090 5.4e-30 135.6 233 37.3
TWI63G1490 Tripterygium wilfordii HOM05D005102 ORTHO05D006090 5.4e-30 135.6 181 44.8
Medtr2g028660 Medicago truncatula HOM05D005102 ORTHO05D006090 7.1e-30 135.2 247 36.4
arahy.Tifrunner.gnm1.ann1.Z186RR Arachis hypogaea HOM05D005102 ORTHO05D006090 1.2e-29 134.4 242 37.2
Gohir.A02G043600 Gossypium hirsutum HOM05D005102 ORTHO05D006090 1.2e-29 134.4 223 38.6
Atru.chr12.1207 Acer truncatum HOM05D005102 ORTHO05D006090 2.1e-29 133.7 238 36.6
Sc13g0003090 Simmondsia chinensis HOM05D005102 ORTHO05D006090 2.1e-29 133.7 233 36.1
SMO364G0891 Selaginella moellendorffii HOM05D005102 ORTHO05D006090 2.7e-29 133.3 234 35.0
Lsat_1_v5_gn_1_75501 Lactuca sativa HOM05D005102 ORTHO05D006090 7.8e-29 131.7 224 38.4
CSS0019941 Camellia sinensis var. sinensis HOM05D005102 ORTHO05D006090 1.0e-28 131.3 231 37.7
CSS0043447 Camellia sinensis var. sinensis HOM05D005102 ORTHO05D006090 1.0e-28 131.3 231 37.7
RcHm_v2.0_Chr7g0178711 Rosa chinensis HOM05D005102 ORTHO05D006090 1.3e-28 131.0 231 35.9
Potri.010G064900 Populus trichocarpa HOM05D005102 ORTHO05D006090 5.1e-28 129.0 233 35.2
THA.LOC104808740 Tarenaya hassleriana HOM05D005102 ORTHO05D006090 6.6e-28 128.6 235 36.6
SGA_v2.0_scaffold193G40717 Striga asiatica HOM05D005102 ORTHO05D006090 8.6e-28 128.3 227 35.7
MSTRG.9850 Avicennia marina HOM05D005102 ORTHO05D006090 1.1e-27 127.9 237 35.4
Cc03_g06480 Coffea canephora HOM05D005102 ORTHO05D006090 5.6e-27 125.6 240 33.3
Sed0020820 Sechium edule HOM05D005102 ORTHO05D006090 9.6e-27 124.8 228 34.2
Nitab4.5_0005154g0050 Nicotiana tabacum HOM05D005102 ORTHO05D006090 2.1e-26 123.6 248 34.3
THA.LOC104810405 Tarenaya hassleriana HOM05D005102 ORTHO05D006090 2.1e-26 123.6 232 34.9
CARHR100410 Cardamine hirsuta HOM05D005102 ORTHO05D006090 2.8e-26 123.2 236 33.5
AUR62015240 Chenopodium quinoa HOM05D005102 ORTHO05D006090 2.8e-26 123.2 233 34.3
AL3G39760 Arabidopsis lyrata HOM05D005102 ORTHO05D006090 3.6e-26 122.9 232 33.2
MD06G1229400 Malus domestica HOM05D005102 ORTHO05D006090 1.1e-25 121.3 235 34.9
A07p08000 Brassica napus HOM05D005102 ORTHO05D006090 1.4e-25 120.9 236 33.9
BraA07t28587Z Brassica rapa HOM05D005102 ORTHO05D006090 1.4e-25 120.9 236 33.9
GSVIVG01027934001 Vitis vinifera HOM05D005102 ORTHO05D006090 1.8e-25 120.6 217 35.9
BcaB06g26613 Brassica carinata HOM05D005102 ORTHO05D006090 2.4e-25 120.2 234 33.8
Thhalv10002630m.g Eutrema salsugineum HOM05D005102 ORTHO05D006090 4.0e-25 119.4 234 33.3
BolC7t41674H Brassica oleracea HOM05D005102 ORTHO05D006090 5.2e-25 119.0 234 33.3
Carub.0003s2465 Capsella rubella HOM05D005102 ORTHO05D006090 5.2e-25 119.0 236 32.6
BcaC06g35682 Brassica carinata HOM05D005102 ORTHO05D006090 6.9e-25 118.6 234 33.3
C07p12060 Brassica napus HOM05D005102 ORTHO05D006090 6.9e-25 118.6 234 33.3
SGA_v2.0_scaffold454G51888 Striga asiatica HOM05D005102 ORTHO05D006090 6.9e-25 118.6 200 37.5
Aa31LG8G11040 Aethionema arabicum HOM05D005102 ORTHO05D006090 1.2e-24 117.9 234 32.5
AT3G24315 Arabidopsis thaliana HOM05D005102 ORTHO05D006090 1.2e-24 117.9 235 33.2
CBR_g37523 Chara braunii HOM05D005102 ORTHO05D006090 1.5e-24 117.5 237 33.8
Hund22254 Selenicereus undatus HOM05D005102 ORTHO05D006090 2.0e-24 117.1 285 29.1
Sabra10G0042100 Salix brachista HOM05D005102 ORTHO05D006090 2.6e-24 116.7 232 33.2
vmacro20979 Vaccinium macrocarpon HOM05D005102 ORTHO05D006090 3.4e-24 116.3 240 36.2
Sp3g22120 Schrenkiella parvula HOM05D005102 ORTHO05D006090 4.4e-24 115.9 236 32.6
C03p53630 Brassica napus HOM05D005102 ORTHO05D006090 5.8e-24 115.5 233 32.6
BcaC01g03326 Brassica carinata HOM05D005102 ORTHO05D006090 9.9e-24 114.8 233 32.2
SGA_v2.0_scaffold127G34013 Striga asiatica HOM05D005102 ORTHO05D006090 1.7e-23 114.0 213 35.2
BolC3t17623H Brassica oleracea HOM05D005102 ORTHO05D006090 4.9e-23 112.5 241 32.0
Lalb_Chr06g0169571 Lupinus albus HOM05D005102 ORTHO05D006090 4.9e-23 112.5 226 31.9
A03p43600 Brassica napus HOM05D005102 ORTHO05D006090 6.4e-23 112.1 234 32.1
PGSC0003DMG400001501 Solanum tuberosum HOM05D005102 ORTHO05D006090 2.4e-22 110.2 264 31.4
vmacro04848 Vaccinium macrocarpon HOM05D005102 ORTHO05D006090 2.4e-22 110.2 137 46.7
ClCG06G002570 Citrullus lanatus HOM05D005102 ORTHO05D006090 1.6e-21 107.5 228 30.3
Rhsim01G0226300 Rhododendron simsii HOM05D005102 ORTHO05D006090 2.1e-21 107.1 255 32.9
Lj6A637G59 Lonicera japonica HOM05D005102 ORTHO05D006090 4.6e-21 105.9 279 31.2
Oeu047122.2 Olea europaea HOM05D005102 ORTHO05D006090 7.8e-21 105.1 253 30.8
CsaV3_6G008560 Cucumis sativus L. HOM05D005102 ORTHO05D006090 1.9e-19 100.5 228 30.3
Peaxi162Scf00531g00334 Petunia axillaris HOM05D005102 ORTHO05D006090 4.3e-19 99.4 188 35.1
Zm00001eb048840 Zea mays HOM05D005102 ORTHO05D006090 1.6e-18 97.4 154 38.3
SalBow2G1408 Salvia bowleyana HOM05D005102 ORTHO05D006090 2.8e-18 96.7 195 34.4
Cpa.g.sc59.14 Carica papaya HOM05D005102 ORTHO05D006090 5.8e-16 89.0 102 47.1
ECA247G3419 Erigeron canadensis HOM05D005102 ORTHO05D006090 7.6e-16 88.6 101 46.5
Nitab4.5_0002613g0070 Nicotiana tabacum HOM05D005102 ORTHO05D006090 1.4e-14 84.3 97 47.4
BraA03t13497Z Brassica rapa HOM05D005102 ORTHO05D006090 2.1e-13 80.5 108 42.6
MELO3C022272.2 Cucumis melo HOM05D005102 ORTHO05D006090 1.3e-12 77.8 228 25.0
Dinv30772 Davidia involucrata HOM05D005102 ORTHO05D006090 5.1e-12 75.9 101 48.5
SHI00826 Sapria himalayana HOM05D005102 ORTHO05D006090 2.4e-09 67.0 228 26.3
Zm00001eb188010 Zea mays HOM05D005102 ORTHO05D006090 2.9e-07 60.1 110 33.6
Cre02.g090650 Chlamydomonas reinhardtii HOM05D005102 ORTHO05D006090 1.9e-06 57.4 219 25.1
Zm00001eb144710 Zea mays HOM05D005102 ORTHO05D006090 1.9e-06 57.4 181 25.4


User provided reference genes

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