Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 2.4e-187 658.7 331 100.0
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 2.0e-61 240.4 228 50.0
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.7e-60 237.3 216 50.5
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 7.2e-59 231.9 208 53.8
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 1.2e-58 231.1 197 54.3
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.2e-58 231.1 239 50.2
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 8.0e-58 228.4 196 55.6
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 4.0e-57 226.1 197 53.3
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 4.0e-57 226.1 197 53.3
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 1.2e-56 224.6 228 50.4
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 2.6e-56 223.4 229 47.2
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 3.4e-56 223.0 216 51.4
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 5.7e-56 222.2 197 54.3
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 1.3e-55 221.1 229 49.3
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 2.2e-55 220.3 225 48.4
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 2.2e-55 220.3 245 46.9
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 2.8e-55 219.9 242 47.9
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 2.8e-55 219.9 197 53.3
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 3.7e-55 219.5 197 53.3
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 4.9e-55 219.2 207 52.7
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 6.3e-55 218.8 215 54.0
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 6.3e-55 218.8 215 50.2
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 8.3e-55 218.4 245 48.2
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 1.1e-54 218.0 229 48.9
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 1.1e-54 218.0 199 51.3
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 1.1e-54 218.0 215 51.2
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 1.4e-54 217.6 265 43.8
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 1.8e-54 217.2 221 48.9
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 2.4e-54 216.9 214 48.1
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 2.4e-54 216.9 236 47.0
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 3.1e-54 216.5 196 53.6
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 7.0e-54 215.3 197 53.3
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 7.0e-54 215.3 200 52.0
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 7.0e-54 215.3 219 48.4
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 9.2e-54 214.9 235 48.9
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 1.6e-53 214.2 222 46.4
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 1.6e-53 214.2 197 52.8
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 1.6e-53 214.2 259 48.3
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 2.0e-53 213.8 197 51.8
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 2.0e-53 213.8 224 47.8
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 2.7e-53 213.4 226 49.1
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 2.7e-53 213.4 199 51.3
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 3.5e-53 213.0 199 49.7
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 4.5e-53 212.6 200 51.0
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 5.9e-53 212.2 232 46.1
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 7.7e-53 211.8 208 49.0
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 1.0e-52 211.5 182 54.9
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 1.0e-52 211.5 208 50.0
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 1.3e-52 211.1 238 47.9
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 1.3e-52 211.1 196 54.1
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 1.3e-52 211.1 205 49.3
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 1.7e-52 210.7 196 50.0
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 1.7e-52 210.7 197 51.3
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 3.8e-52 209.5 239 45.2
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 5.0e-52 209.1 207 49.3
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 5.0e-52 209.1 207 48.8
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 5.0e-52 209.1 198 50.5
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 5.0e-52 209.1 248 45.6
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 5.0e-52 209.1 197 51.3
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 8.6e-52 208.4 207 46.9
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 8.6e-52 208.4 234 46.6
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 8.6e-52 208.4 195 50.8
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.1e-51 208.0 215 48.4
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 1.5e-51 207.6 184 51.6
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 1.5e-51 207.6 197 52.3
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 3.3e-51 206.5 198 47.5
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 4.3e-51 206.1 196 50.5
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 1.6e-50 204.1 192 49.5
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 1.6e-50 204.1 227 45.8
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 2.1e-50 203.8 215 47.9
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 2.8e-50 203.4 236 46.6
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 6.1e-50 202.2 219 47.0
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 8.0e-50 201.8 241 43.2
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 1.0e-49 201.4 207 47.3
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 9.8e-48 194.9 191 51.3
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 2.4e-46 190.3 207 46.9
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 3.5e-45 186.4 168 54.2
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 1.2e-42 177.9 213 43.2
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 2.8e-42 176.8 191 47.6
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 6.2e-42 175.6 273 38.8
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 1.8e-41 174.1 164 53.7
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 2.3e-41 173.7 267 39.3
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 5.8e-40 169.1 173 50.9
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 9.8e-40 168.3 152 53.3
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 4.9e-39 166.0 141 56.7
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 4.9e-39 166.0 197 44.2
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 1.6e-37 161.0 209 42.6
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 4.7e-34 149.4 220 39.5
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 8.1e-34 148.7 140 49.3
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 1.8e-33 147.5 145 46.2
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 1.7e-31 141.0 189 42.3
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 4.6e-29 132.9 165 40.6
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 1.2e-26 124.8 105 54.3
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 4.7e-26 122.9 209 34.9
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 1.8e-25 120.9 112 48.2
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 2.0e-24 117.5 155 43.2
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 1.8e-17 94.4 196 30.1
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 1.5e-16 91.3 208 30.8
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 9.9e-16 88.6 96 49.0
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 4.9e-15 86.3 78 51.3
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.2e-13 81.6 83 47.0
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 7.8e-13 79.0 66 53.0
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 5.6e-11 72.8 93 40.9


User provided reference genes

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