Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c16_17450 Physcomitrium patens HOM05D003879 ORTHO05D003858 1.2e-98 363.2 191 100.0
Mapoly0084s0083 Marchantia polymorpha HOM05D003879 ORTHO05D003858 3.0e-25 119.4 86 61.6
ATR0559G110 Amborella trichopoda HOM05D003879 ORTHO05D003858 1.1e-22 110.9 88 58.0
Hma1.2p1_1079F.1_g254860 Hydrangea macrophylla HOM05D003879 ORTHO05D003858 5.9e-21 105.1 119 46.2
TAR622G1013 Trochodendron aralioides HOM05D003879 ORTHO05D003858 3.8e-20 102.4 123 45.5
Dinv16679 Davidia involucrata HOM05D003879 ORTHO05D003858 6.5e-20 101.7 135 42.2
Duzib251G0512 Durio zibethinus HOM05D003879 ORTHO05D003858 6.5e-20 101.7 124 46.8
Nn5g27527 Nelumbo nucifera HOM05D003879 ORTHO05D003858 8.5e-20 101.3 135 41.5
Nn3g17308 Nelumbo nucifera HOM05D003879 ORTHO05D003858 1.9e-19 100.1 91 51.6
Actinidia31968 Actinidia chinensis HOM05D003879 ORTHO05D003858 5.5e-19 98.6 93 46.2
vmacro16344 Vaccinium macrocarpon HOM05D003879 ORTHO05D003858 5.5e-19 98.6 98 48.0
Medtr4g082300 Medicago truncatula HOM05D003879 ORTHO05D003858 7.2e-19 98.2 89 47.2
Lsat_1_v5_gn_4_10781 Lactuca sativa HOM05D003879 ORTHO05D003858 9.4e-19 97.8 110 44.5
Os03g0647400 Oryza sativa ssp. japonica HOM05D003879 ORTHO05D003858 9.4e-19 97.8 90 53.3
FAN10G1503 Fragaria x ananassa HOM05D003879 ORTHO05D003858 1.6e-18 97.1 110 41.8
Rhsim12G0132500 Rhododendron simsii HOM05D003879 ORTHO05D003858 1.6e-18 97.1 78 53.8
CsaV3_5G033000 Cucumis sativus L. HOM05D003879 ORTHO05D003858 2.1e-18 96.7 106 48.1
Dinv34127 Davidia involucrata HOM05D003879 ORTHO05D003858 2.1e-18 96.7 122 43.4
Thecc.02G340900 Theobroma cacao HOM05D003879 ORTHO05D003858 2.1e-18 96.7 90 52.2
TWI60G0224 Tripterygium wilfordii HOM05D003879 ORTHO05D003858 2.1e-18 96.7 78 53.8
Actinidia17746 Actinidia chinensis HOM05D003879 ORTHO05D003858 3.6e-18 95.9 104 46.2
CiPaw.06G087900 Carya illinoinensis HOM05D003879 ORTHO05D003858 3.6e-18 95.9 99 49.5
MBI07_g22385_MAGBIO Magnolia biondii HOM05D003879 ORTHO05D003858 3.6e-18 95.9 125 42.4
SGA_v2.0_scaffold455G51901 Striga asiatica HOM05D003879 ORTHO05D003858 3.6e-18 95.9 122 45.1
TWI73G0721 Tripterygium wilfordii HOM05D003879 ORTHO05D003858 3.6e-18 95.9 92 50.0
Thhalv10008923m.g Eutrema salsugineum HOM05D003879 ORTHO05D003858 4.7e-18 95.5 92 48.9
CSS0010298 Camellia sinensis var. sinensis HOM05D003879 ORTHO05D003858 6.1e-18 95.1 147 35.4
Aqoxy4G02841 Aquilegia oxysepala HOM05D003879 ORTHO05D003858 1.0e-17 94.4 123 43.1
MSTRG.7783 Avicennia marina HOM05D003879 ORTHO05D003858 1.4e-17 94.0 84 54.8
CBR_g26201 Chara braunii HOM05D003879 ORTHO05D003858 1.4e-17 94.0 78 52.6
Prupe.1G004000 Prunus persica HOM05D003879 ORTHO05D003858 1.4e-17 94.0 73 54.8
SGA_v2.0_scaffold36G14411 Striga asiatica HOM05D003879 ORTHO05D003858 1.4e-17 94.0 133 39.1
THA.LOC104805175 Tarenaya hassleriana HOM05D003879 ORTHO05D003858 1.4e-17 94.0 107 43.9
Thecc.07G109400 Theobroma cacao HOM05D003879 ORTHO05D003858 1.4e-17 94.0 109 44.0
Migut.L01257 Erythranthe guttata HOM05D003879 ORTHO05D003858 1.8e-17 93.6 95 50.5
FAN06G4142 Fragaria x ananassa HOM05D003879 ORTHO05D003858 1.8e-17 93.6 95 46.3
PSO063G6167 Papaver somniferum HOM05D003879 ORTHO05D003858 1.8e-17 93.6 85 47.1
Sp1g12410 Schrenkiella parvula HOM05D003879 ORTHO05D003858 1.8e-17 93.6 93 50.5
CARHR014450 Cardamine hirsuta HOM05D003879 ORTHO05D003858 2.3e-17 93.2 80 51.2
Haze_11967 Corylus avellana HOM05D000508 ORTHO05D000371 2.3e-17 93.2 84 51.2
Cpa.g.sc171.23 Carica papaya HOM05D003879 ORTHO05D003858 3.0e-17 92.8 98 45.9
Gohir.D11G305600 Gossypium hirsutum HOM05D003879 ORTHO05D003858 3.0e-17 92.8 112 45.5
arahy.Tifrunner.gnm1.ann1.1F58IB Arachis hypogaea HOM05D003879 ORTHO05D003858 4.0e-17 92.4 82 51.2
FvH4_7g07760 Fragaria vesca HOM05D003879 ORTHO05D003858 4.0e-17 92.4 92 46.7
Glyma.20G032800 Glycine max HOM05D003879 ORTHO05D003858 4.0e-17 92.4 98 43.9
VMungo0251G2410 Vigna mungo HOM05D003879 ORTHO05D003858 4.0e-17 92.4 102 44.1
arahy.Tifrunner.gnm1.ann1.8KK2IT Arachis hypogaea HOM05D003879 ORTHO05D003858 5.2e-17 92.0 82 51.2
A08p32120 Brassica napus HOM05D003879 ORTHO05D003858 5.2e-17 92.0 114 41.2
BraA08t35135Z Brassica rapa HOM05D003879 ORTHO05D003858 5.2e-17 92.0 114 41.2
CDE04G3169 Ceratophyllum demersum HOM05D000406 ORTHO05D007930 5.2e-17 92.0 95 47.4
CDE07G0815 Ceratophyllum demersum HOM05D003879 ORTHO05D003858 5.2e-17 92.0 80 55.0
FAN01G2110 Fragaria x ananassa HOM05D003879 ORTHO05D003858 5.2e-17 92.0 98 42.9
PGR119G2196 Punica granatum HOM05D003879 ORTHO05D003858 5.2e-17 92.0 88 51.1
ClCG05G024040 Citrullus lanatus HOM05D003879 ORTHO05D003858 6.7e-17 91.7 104 45.2
COL.COLO4_27987 Corchorus olitorius HOM05D003879 ORTHO05D003858 6.7e-17 91.7 89 50.6
Phvul.002G169800 Phaseolus vulgaris HOM05D003879 ORTHO05D003858 6.7e-17 91.7 100 43.0
Phvul.005G037600 Phaseolus vulgaris HOM05D003879 ORTHO05D003858 6.7e-17 91.7 105 41.9
TAR374G1047 Trochodendron aralioides HOM05D003879 ORTHO05D003858 6.7e-17 91.7 116 45.7
MSTRG.2335 Avicennia marina HOM05D003879 ORTHO05D003858 8.8e-17 91.3 140 40.7
BolC8t49272H Brassica oleracea HOM05D003879 ORTHO05D003858 8.8e-17 91.3 75 52.0
HanXRQChr12g0361951 Helianthus annuus HOM05D003879 ORTHO05D003858 8.8e-17 91.3 101 43.6
MELO3C012121.2 Cucumis melo HOM05D003879 ORTHO05D003858 1.2e-16 90.9 90 50.0
Sed0022737 Sechium edule HOM05D003879 ORTHO05D003858 1.2e-16 90.9 92 48.9
Sc04g0007930 Simmondsia chinensis HOM05D003879 ORTHO05D003858 1.2e-16 90.9 107 41.1
Ah.02g129450 Amaranthus hybridus HOM05D003879 ORTHO05D003858 1.5e-16 90.5 103 44.7
DCAR_014653 Daucus carota HOM05D003879 ORTHO05D003858 1.5e-16 90.5 86 47.7
BcaC07g38717 Brassica carinata HOM05D003879 ORTHO05D003858 2.0e-16 90.1 92 46.7
C08p16470 Brassica napus HOM05D003879 ORTHO05D003858 2.0e-16 90.1 92 46.7
Carub.0001s1375 Capsella rubella HOM05D003879 ORTHO05D003858 2.0e-16 90.1 73 52.1
Ca_08721_v3 Cicer arietinum L. HOM05D003879 ORTHO05D003858 2.0e-16 90.1 93 46.2
Manes.08G154000 Manihot esculenta HOM05D003879 ORTHO05D003858 2.0e-16 90.1 88 48.9
Psat7g156280 Pisum sativum HOM05D003879 ORTHO05D003858 2.0e-16 90.1 90 47.8
Zm00001eb300270 Zea mays HOM05D003879 ORTHO05D003858 2.0e-16 90.1 73 53.4
Ah.03g134780 Amaranthus hybridus HOM05D003879 ORTHO05D003858 2.6e-16 89.7 73 53.4
arahy.Tifrunner.gnm1.ann1.WFL4FE Arachis hypogaea HOM05D003879 ORTHO05D003858 2.6e-16 89.7 85 49.4
EL10Ac6g13251 Beta vulgaris HOM05D003879 ORTHO05D003858 2.6e-16 89.7 96 46.9
Mapoly0074s0048 Marchantia polymorpha HOM05D003879 ORTHO05D003858 2.6e-16 89.7 105 41.0
TPR.G34072 Trifolium pratense HOM05D003879 ORTHO05D003858 2.6e-16 89.7 167 34.1
HPP92_007611 Vanilla planifolia HOM05D003879 ORTHO05D003858 2.6e-16 89.7 86 47.7
Aa31LG1G980 Aethionema arabicum HOM05D003879 ORTHO05D003858 3.3e-16 89.4 142 35.9
Aqoxy5G03435 Aquilegia oxysepala HOM05D003879 ORTHO05D003858 3.3e-16 89.4 155 34.2
Gohir.A11G287541 Gossypium hirsutum HOM05D003879 ORTHO05D003858 3.3e-16 89.4 96 47.9
MD04G1004200 Malus domestica HOM05D003879 ORTHO05D003858 3.3e-16 89.4 73 52.1
BcaB03g13115 Brassica carinata HOM05D003879 ORTHO05D003858 4.4e-16 89.0 85 49.4
ECA234G2637 Erigeron canadensis HOM05D003879 ORTHO05D003858 4.4e-16 89.0 92 48.9
Eucgr.B03201 Eucalyptus grandis HOM05D003879 ORTHO05D003858 4.4e-16 89.0 84 48.8
Lj4g0017661 Lotus japonicus HOM05D003879 ORTHO05D003858 4.4e-16 89.0 81 50.6
MD06G1002200 Malus domestica HOM05D003879 ORTHO05D003858 4.4e-16 89.0 91 46.2
unitig_21.g20857 Utricularia gibba HOM05D003879 ORTHO05D003858 4.4e-16 89.0 123 39.8
CAN.G964.6 Capsicum annuum HOM05D003879 ORTHO05D003858 5.7e-16 88.6 105 41.0
Gorai.007G326500 Gossypium raimondii HOM05D003879 ORTHO05D003858 5.7e-16 88.6 98 46.9
Atru.chr11.1737 Acer truncatum HOM05D003879 ORTHO05D003858 7.5e-16 88.2 146 34.9
AT1G14060 Arabidopsis thaliana HOM05D003879 ORTHO05D003858 7.5e-16 88.2 98 42.9
Cfa008939 Carpinus fangiana HOM05D003879 ORTHO05D003858 7.5e-16 88.2 130 38.5
Ciclev10033434m.g Citrus clementina HOM05D003879 ORTHO05D003858 7.5e-16 88.2 142 35.2
RcHm_v2.0_Chr1g0342011 Rosa chinensis HOM05D003879 ORTHO05D003858 7.5e-16 88.2 76 47.4
Gohir.D11G305800 Gossypium hirsutum HOM05D003879 ORTHO05D003858 9.7e-16 87.8 106 43.4
Cc11_g12680 Coffea canephora HOM05D003879 ORTHO05D003858 1.3e-15 87.4 89 47.2
Duzib268G0934 Durio zibethinus HOM05D003879 ORTHO05D003858 2.2e-15 86.7 76 51.3
Nitab4.5_0000391g0360 Nicotiana tabacum HOM05D003879 ORTHO05D003858 2.2e-15 86.7 87 46.0
Nitab4.5_0004690g0010 Nicotiana tabacum HOM05D003879 ORTHO05D003858 2.2e-15 86.7 86 44.2
CiPaw.07G072500 Carya illinoinensis HOM05D003879 ORTHO05D003858 2.8e-15 86.3 124 40.3
ECA233G3198 Erigeron canadensis HOM05D003879 ORTHO05D003858 2.8e-15 86.3 78 47.4
AL1G25920 Arabidopsis lyrata HOM05D003879 ORTHO05D003858 3.7e-15 85.9 93 45.2
Lalb_Chr09g0329191 Lupinus albus HOM05D003879 ORTHO05D003858 3.7e-15 85.9 105 38.1
SalBow8G1689 Salvia bowleyana HOM05D003879 ORTHO05D003858 3.7e-15 85.9 124 38.7
COL.COLO4_17583 Corchorus olitorius HOM05D003879 ORTHO05D003858 6.3e-15 85.1 72 51.4
QL03p069280 Quercus lobata HOM05D003879 ORTHO05D003858 6.3e-15 85.1 104 40.4
Solyc05g013170.2 Solanum lycopersicum HOM05D003879 ORTHO05D003858 6.3e-15 85.1 94 44.7
FvH4_5g26420 Fragaria vesca HOM05D003879 ORTHO05D003858 8.2e-15 84.7 119 42.0
FAN13G1900 Fragaria x ananassa HOM05D003879 ORTHO05D003858 8.2e-15 84.7 119 42.0
FAN18G4377 Fragaria x ananassa HOM05D003879 ORTHO05D003858 8.2e-15 84.7 119 42.0
Lsat_1_v5_gn_8_48881 Lactuca sativa HOM05D003879 ORTHO05D003858 8.2e-15 84.7 82 47.6
Lj4g0023987 Lotus japonicus HOM05D003879 ORTHO05D003858 1.1e-14 84.3 83 47.0
Nitab4.5_0013306g0020 Nicotiana tabacum HOM05D003879 ORTHO05D003858 1.1e-14 84.3 89 46.1
Sopen05g007910 Solanum pennellii HOM05D003879 ORTHO05D003858 1.1e-14 84.3 67 53.7
PGSC0003DMG400028395 Solanum tuberosum HOM05D003879 ORTHO05D003858 1.1e-14 84.3 69 52.2
Prupe.5G003300 Prunus persica HOM05D003879 ORTHO05D003858 1.8e-14 83.6 110 36.4
Zm00001eb218620 Zea mays HOM05D003879 ORTHO05D003858 1.8e-14 83.6 74 50.0
THA.LOC104824074 Tarenaya hassleriana HOM05D003879 ORTHO05D003858 2.4e-14 83.2 112 42.0
Rhsim05G0092100 Rhododendron simsii HOM05D003879 ORTHO05D003858 3.1e-14 82.8 78 50.0
Potri.019G081400 Populus trichocarpa HOM05D003879 ORTHO05D003858 1.2e-13 80.9 73 49.3
SMO353G0120 Selaginella moellendorffii HOM05D003879 ORTHO05D003858 1.2e-13 80.9 75 50.7
Sabra19G0093000 Salix brachista HOM05D003879 ORTHO05D003858 1.6e-13 80.5 73 49.3
Os07g0158400 Oryza sativa ssp. japonica HOM05D003879 ORTHO05D003858 2.0e-13 80.1 92 43.5
PSO017G6566 Papaver somniferum HOM05D003879 ORTHO05D003858 2.0e-13 80.1 75 44.0
PSO478G4561 Papaver somniferum HOM05D003879 ORTHO05D003858 2.0e-13 80.1 75 44.0
RhsimUnG0183500 Rhododendron simsii HOM05D003879 ORTHO05D003858 2.0e-13 80.1 91 41.8
PGSC0003DMG400002853 Solanum tuberosum HOM05D003879 ORTHO05D003858 2.0e-13 80.1 83 44.6
Potri.013G099100 Populus trichocarpa HOM05D003879 ORTHO05D003858 2.7e-13 79.7 127 36.2
SHI14928 Sapria himalayana HOM05D003879 ORTHO05D003858 2.7e-13 79.7 76 46.1
Nitab4.5_0000014g0130 Nicotiana tabacum HOM05D003879 ORTHO05D003858 4.5e-13 79.0 144 32.6
Sopen04g001620 Solanum pennellii HOM05D003879 ORTHO05D003858 4.5e-13 79.0 83 42.2
arahy.Tifrunner.gnm1.ann1.BSX7E4 Arachis hypogaea HOM05D003879 ORTHO05D003858 5.9e-13 78.6 78 47.4
Lalb_Chr16g0385721 Lupinus albus HOM05D003879 ORTHO05D003858 5.9e-13 78.6 71 49.3
Sabra13G0083700 Salix brachista HOM05D003879 ORTHO05D003858 5.9e-13 78.6 139 33.8
Sabra13G0085000 Salix brachista HOM05D003879 ORTHO05D003858 5.9e-13 78.6 139 33.8
Solyc04g005580.1 Solanum lycopersicum HOM05D003879 ORTHO05D003858 5.9e-13 78.6 84 40.5
Potri.013G109100 Populus trichocarpa HOM05D003879 ORTHO05D003858 1.3e-12 77.4 72 47.2
Zm00001eb050330 Zea mays HOM05D003879 ORTHO05D003858 1.3e-12 77.4 101 41.6
Ca_08720_v3 Cicer arietinum L. HOM05D003879 ORTHO05D003858 1.7e-12 77.0 85 43.5
AUR62005832 Chenopodium quinoa HOM05D003879 ORTHO05D003858 1.9e-11 73.6 76 48.7
BcaB08g34355 Brassica carinata HOM05D003879 ORTHO05D003858 2.5e-11 73.2 73 45.2
BcaB08g34356 Brassica carinata HOM05D003879 ORTHO05D003858 2.5e-11 73.2 73 45.2
BcaB08g34363 Brassica carinata HOM05D003879 ORTHO05D003858 2.5e-11 73.2 73 45.2
MCO14G435 Micromonas commoda HOM05D003879 ORTHO05D003858 2.5e-11 73.2 66 51.5
BcaB08g34365 Brassica carinata HOM05D003879 ORTHO05D003858 3.2e-11 72.8 82 41.5
Cre14.g619950 Chlamydomonas reinhardtii HOM05D003879 ORTHO05D003858 3.2e-11 72.8 97 39.2
Manes.01G033400 Manihot esculenta HOM05D003879 ORTHO05D003858 3.2e-11 72.8 72 44.4
BcaB08g34362 Brassica carinata HOM05D003879 ORTHO05D003858 4.2e-11 72.4 84 39.3
BcaC07g40413 Brassica carinata HOM05D000331 ORTHO05D003858 7.2e-11 71.6 100 35.0
C08p46070 Brassica napus HOM05D003879 ORTHO05D003858 1.6e-10 70.5 100 36.0
Lj3P1034T75 Lonicera japonica HOM05D003879 ORTHO05D003858 2.7e-10 69.7 66 45.5
A10p15050 Brassica napus HOM05D015339 ORTHO05D003858 8.0e-10 68.2 95 37.9
BcaC07g41607 Brassica carinata HOM05D003879 ORTHO05D003858 1.0e-09 67.8 107 37.4
BolC8t52157H Brassica oleracea HOM05D003879 ORTHO05D003858 1.0e-09 67.8 107 37.4
AUR62032825 Chenopodium quinoa HOM05D000508 ORTHO05D000371 1.0e-09 67.8 73 46.6
A09p62510 Brassica napus HOM05D003879 ORTHO05D003858 1.4e-09 67.4 95 35.8
BraA10t43587Z Brassica rapa HOM05D015339 ORTHO05D003858 1.8e-09 67.0 95 36.8
BraA09t41615Z Brassica rapa HOM05D003879 ORTHO05D003858 2.3e-09 66.6 103 33.0
BcaB08g36120 Brassica carinata HOM05D015339 ORTHO05D003858 1.2e-08 64.3 77 37.7
BcaC04g19944 Brassica carinata HOM05D015339 ORTHO05D003858 1.2e-08 64.3 70 42.9
C09p49520 Brassica napus HOM05D015339 ORTHO05D003858 1.2e-08 64.3 70 42.9
BolC9t57805H Brassica oleracea HOM05D015339 ORTHO05D003858 1.2e-08 64.3 70 42.9
BraA09t40680Z Brassica rapa HOM05D003879 ORTHO05D003858 2.0e-08 63.5 98 32.7
Carub.0001s1374 Capsella rubella HOM05D003879 ORTHO05D003858 2.6e-08 63.2 101 32.7
Carub.0008s1815 Capsella rubella HOM05D003879 ORTHO05D003858 5.7e-08 62.0 129 32.6
RcHm_v2.0_Chr7g0217291 Rosa chinensis HOM05D003879 ORTHO05D003858 5.7e-08 62.0 91 39.6
Lj6C784G16 Lonicera japonica HOM05D000508 ORTHO05D006805 1.3e-07 60.8 65 36.9
SalBow1G6087 Salvia bowleyana HOM05D003879 ORTHO05D003858 6.3e-07 58.5 84 38.1
SalBow6G3484 Salvia bowleyana HOM05D003879 ORTHO05D003858 6.3e-07 58.5 84 38.1
SalBow6G4156 Salvia bowleyana HOM05D003879 ORTHO05D003858 6.3e-07 58.5 84 38.1
SalBow8G1644 Salvia bowleyana HOM05D003879 ORTHO05D003858 6.3e-07 58.5 84 38.1
CARHR014440 Cardamine hirsuta HOM05D003879 ORTHO05D003858 1.8e-06 57.0 65 36.9
Cre15.g641700 Chlamydomonas reinhardtii HOM05D003879 ORTHO05D003858 3.1e-06 56.2 97 27.8


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