Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c16_1710 Physcomitrium patens HOM05D006243 ORTHO05D007688 1.1e-191 673.3 393 100.0
Pp3c25_7980 Physcomitrium patens HOM05D006243 ORTHO05D007688 1.8e-136 490.0 387 77.8
Pp3c5_8230 Physcomitrium patens HOM05D006243 ORTHO05D007688 1.0e-120 437.6 384 70.8
Mapoly0055s0114 Marchantia polymorpha HOM05D006243 ORTHO05D007688 3.6e-65 253.1 373 50.4
AagrBONN_evm.TU.Sc2ySwM_117.2468 Anthoceros agrestis HOM05D006243 ORTHO05D007688 1.4e-61 241.1 242 55.8
SEGI_26344 Sequoiadendron giganteum HOM05D006243 ORTHO05D007688 1.0e-59 235.0 324 52.5
Nn4g24254 Nelumbo nucifera HOM05D006243 ORTHO05D007688 3.3e-58 229.9 340 49.4
Cpa.g.sc67.47 Carica papaya HOM05D006243 ORTHO05D007688 1.8e-56 224.2 316 50.0
Haze_14258 Corylus avellana HOM05D006243 ORTHO05D007688 1.2e-55 221.5 342 46.5
Potri.017G129100 Populus trichocarpa HOM05D006243 ORTHO05D007688 2.6e-55 220.3 307 47.9
Atru.chr1.1900 Acer truncatum HOM05D006243 ORTHO05D007688 3.4e-55 219.9 336 46.7
Cfa007817 Carpinus fangiana HOM05D006243 ORTHO05D007688 3.4e-55 219.9 342 45.9
Glyma.02G245300 Glycine max HOM05D006243 ORTHO05D007688 3.4e-55 219.9 237 48.1
TPR.G8275 Trifolium pratense HOM05D006243 ORTHO05D007688 3.4e-55 219.9 239 48.5
CiPaw.03G071500 Carya illinoinensis HOM05D006243 ORTHO05D007688 5.8e-55 219.2 315 47.9
CANSAT64G2718 Cannabis sativa HOM05D006243 ORTHO05D007688 7.5e-55 218.8 355 46.5
MD09G1263800 Malus domestica HOM05D006243 ORTHO05D007688 1.7e-54 217.6 237 48.5
Eucgr.J01597 Eucalyptus grandis HOM05D006243 ORTHO05D007688 2.2e-54 217.2 313 47.6
CSS0038083 Camellia sinensis var. sinensis HOM05D006243 ORTHO05D007688 2.9e-54 216.9 323 48.9
Medtr5g078290 Medicago truncatula HOM05D006243 ORTHO05D007688 2.9e-54 216.9 308 48.1
Lalb_Chr10g0104381 Lupinus albus HOM05D006243 ORTHO05D007688 3.7e-54 216.5 307 48.2
LjContig00141g0011202 Lotus japonicus HOM05D006243 ORTHO05D007688 4.9e-54 216.1 311 44.7
MD17G1259100 Malus domestica HOM05D006243 ORTHO05D007688 4.9e-54 216.1 354 44.9
Manes.01G117900 Manihot esculenta HOM05D006243 ORTHO05D007688 4.9e-54 216.1 238 49.6
CAN.G222.23 Capsicum annuum HOM05D006243 ORTHO05D007688 6.4e-54 215.7 233 51.5
CsaV3_3G020810 Cucumis sativus L. HOM05D006243 ORTHO05D007688 6.4e-54 215.7 234 50.0
COL.COLO4_10159 Corchorus olitorius HOM05D006243 ORTHO05D007688 8.3e-54 215.3 332 44.9
Prupe.3G161300 Prunus persica HOM05D006243 ORTHO05D007688 8.3e-54 215.3 237 48.5
Sabra17G0107600 Salix brachista HOM05D006243 ORTHO05D007688 8.3e-54 215.3 238 49.2
Cc07_g13520 Coffea canephora HOM05D006243 ORTHO05D007688 1.1e-53 214.9 237 49.8
unitig_736.g22596 Utricularia gibba HOM05D006243 ORTHO05D007688 1.1e-53 214.9 240 49.2
FAN28G0309 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.4e-53 214.5 238 48.7
ClCG05G011500 Citrullus lanatus HOM05D006243 ORTHO05D007688 1.9e-53 214.2 232 50.9
FvH4_1g28740 Fragaria vesca HOM05D006243 ORTHO05D007688 1.9e-53 214.2 238 48.7
FAN19G0552 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.9e-53 214.2 238 48.7
Oeu012257.1 Olea europaea HOM05D006243 ORTHO05D007688 2.4e-53 213.8 237 49.8
Aa31LG2G3000 Aethionema arabicum HOM05D006243 ORTHO05D007688 4.1e-53 213.0 237 48.1
CDE04G1800 Ceratophyllum demersum HOM05D006243 ORTHO05D007688 5.4e-53 212.6 257 47.9
Thecc.04G115200 Theobroma cacao HOM05D006243 ORTHO05D007688 5.4e-53 212.6 332 47.3
Aqoxy3G00051 Aquilegia oxysepala HOM05D006243 ORTHO05D007688 7.0e-53 212.2 237 48.5
EL10Ac2g03168 Beta vulgaris HOM05D006243 ORTHO05D007688 7.0e-53 212.2 237 48.9
Rhsim10G0177000 Rhododendron simsii HOM05D006243 ORTHO05D007688 7.0e-53 212.2 238 48.7
Sc10g0004760 Simmondsia chinensis HOM05D006243 ORTHO05D007688 9.2e-53 211.8 314 48.7
Solyc11g011170.2 Solanum lycopersicum HOM05D006243 ORTHO05D007688 9.2e-53 211.8 233 50.6
HPP92_027416 Vanilla planifolia HOM05D006243 ORTHO05D007688 9.2e-53 211.8 357 45.7
ATR0317G069 Amborella trichopoda HOM05D006243 ORTHO05D007688 1.2e-52 211.5 314 49.4
Migut.H02264 Erythranthe guttata HOM05D006243 ORTHO05D007688 1.2e-52 211.5 355 45.9
Phvul.008G235800 Phaseolus vulgaris HOM05D006243 ORTHO05D007688 1.2e-52 211.5 320 44.1
FAN26G0580 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.6e-52 211.1 238 47.9
TWI53G0799 Tripterygium wilfordii HOM05D006243 ORTHO05D007688 1.6e-52 211.1 305 49.8
Ciclev10011587m.g Citrus clementina HOM05D006243 ORTHO05D007688 2.0e-52 210.7 237 47.3
PGSC0003DMG402015686 Solanum tuberosum HOM05D006243 ORTHO05D007688 2.0e-52 210.7 233 50.6
Gohir.A07G078300 Gossypium hirsutum HOM05D006243 ORTHO05D007688 2.7e-52 210.3 304 50.0
vmacro07692 Vaccinium macrocarpon HOM05D006243 ORTHO05D007688 2.7e-52 210.3 256 47.7
MELO3C020192.2 Cucumis melo HOM05D006243 ORTHO05D007688 3.5e-52 209.9 231 50.2
Lj4A263G87 Lonicera japonica HOM05D006243 ORTHO05D007688 3.5e-52 209.9 240 49.6
Lalb_Chr17g0346141 Lupinus albus HOM05D006243 ORTHO05D007688 3.5e-52 209.9 309 48.2
Sopen11g005930 Solanum pennellii HOM05D006243 ORTHO05D007688 3.5e-52 209.9 233 50.2
Duzib133G1335 Durio zibethinus HOM05D006243 ORTHO05D007688 4.6e-52 209.5 316 47.8
Oeu032326.2 Olea europaea HOM05D006243 ORTHO05D007688 4.6e-52 209.5 233 50.2
Peaxi162Scf00305g00613 Petunia axillaris HOM05D006243 ORTHO05D007688 4.6e-52 209.5 233 51.1
RcHm_v2.0_Chr3g0493131 Rosa chinensis HOM05D006243 ORTHO05D007688 4.6e-52 209.5 331 47.1
Hund13108 Selenicereus undatus HOM05D006243 ORTHO05D007688 4.6e-52 209.5 243 47.3
GSVIVG01030779001 Vitis vinifera HOM05D006243 ORTHO05D007688 4.6e-52 209.5 342 46.8
SMO238G0021 Selaginella moellendorffii HOM05D006243 ORTHO05D007688 6.0e-52 209.1 326 51.8
Lsat_1_v5_gn_3_64500 Lactuca sativa HOM05D006243 ORTHO05D007688 7.8e-52 208.8 237 50.6
arahy.Tifrunner.gnm1.ann1.Y3W4B5 Arachis hypogaea HOM05D006243 ORTHO05D007688 1.0e-51 208.4 237 47.3
Gorai.001G088700 Gossypium raimondii HOM05D006243 ORTHO05D007688 1.0e-51 208.4 304 50.0
MSTRG.23392 Avicennia marina HOM05D006243 ORTHO05D007688 1.3e-51 208.0 338 47.0
PSO017G3733 Papaver somniferum HOM05D006243 ORTHO05D007688 1.3e-51 208.0 238 48.3
THA.LOC104805617 Tarenaya hassleriana HOM05D006243 ORTHO05D007688 1.3e-51 208.0 237 48.5
ECA246G3278 Erigeron canadensis HOM05D006243 ORTHO05D007688 1.7e-51 207.6 237 49.4
Sp5g21350 Schrenkiella parvula HOM05D006243 ORTHO05D007688 1.7e-51 207.6 259 44.4
Actinidia06497 Actinidia chinensis HOM05D006243 ORTHO05D007688 3.9e-51 206.5 238 49.2
AT1G66330 Arabidopsis thaliana HOM05D006243 ORTHO05D007688 3.9e-51 206.5 237 48.5
C02p21930 Brassica napus HOM05D006243 ORTHO05D007688 3.9e-51 206.5 244 47.5
HanXRQChr13g0418351 Helianthus annuus HOM05D006243 ORTHO05D007688 3.9e-51 206.5 237 49.4
PSO478G0940 Papaver somniferum HOM05D006243 ORTHO05D007688 5.0e-51 206.1 260 45.8
TAR629G1693 Trochodendron aralioides HOM05D006243 ORTHO05D007688 6.6e-51 205.7 331 47.7
CARHR058210 Cardamine hirsuta HOM05D006243 ORTHO05D007688 1.1e-50 204.9 238 47.5
Gohir.D07G083100 Gossypium hirsutum HOM05D006243 ORTHO05D007688 1.1e-50 204.9 304 49.3
BcaB05g24167 Brassica carinata HOM05D006243 ORTHO05D007688 1.5e-50 204.5 239 46.9
Os05g0148700 Oryza sativa ssp. japonica HOM05D006243 ORTHO05D007688 1.5e-50 204.5 239 46.9
A02p13590 Brassica napus HOM05D006243 ORTHO05D007688 1.9e-50 204.1 242 47.5
AUR62018213 Chenopodium quinoa HOM05D006243 ORTHO05D007688 1.9e-50 204.1 236 47.5
AUR62038703 Chenopodium quinoa HOM05D006243 ORTHO05D007688 1.9e-50 204.1 341 44.9
BcaC03g14742 Brassica carinata HOM05D006243 ORTHO05D007688 2.5e-50 203.8 255 45.9
BolC2t08324H Brassica oleracea HOM05D006243 ORTHO05D007688 2.5e-50 203.8 255 45.9
BraA02t06418Z Brassica rapa HOM05D006243 ORTHO05D007688 4.3e-50 203.0 237 47.7
AL2G24050 Arabidopsis lyrata HOM05D006243 ORTHO05D007688 5.6e-50 202.6 237 48.1
BcaB03g15275 Brassica carinata HOM05D006243 ORTHO05D007688 7.3e-50 202.2 237 48.1
Carub.0002s1234 Capsella rubella HOM05D006243 ORTHO05D007688 7.3e-50 202.2 237 47.7
SalBow3G2874 Salvia bowleyana HOM05D006243 ORTHO05D007688 2.8e-49 200.3 237 47.7
BcaC08g46068 Brassica carinata HOM05D006243 ORTHO05D007688 1.1e-48 198.4 238 47.5
DCAR_014173 Daucus carota HOM05D006243 ORTHO05D007688 3.1e-48 196.8 237 45.6
BraA07t30960Z Brassica rapa HOM05D006243 ORTHO05D007688 6.8e-48 195.7 238 47.5
Zm00001eb165460 Zea mays HOM05D006243 ORTHO05D007688 8.9e-48 195.3 240 46.2
C06p39620 Brassica napus HOM05D006243 ORTHO05D007688 2.6e-47 193.7 239 47.3
BolC6t39055H Brassica oleracea HOM05D006243 ORTHO05D007688 2.6e-47 193.7 239 47.3
A07p33290 Brassica napus HOM05D006243 ORTHO05D007688 1.7e-46 191.0 239 47.3
arahy.Tifrunner.gnm1.ann1.SFD8TD Arachis hypogaea HOM05D006243 ORTHO05D007688 3.2e-45 186.8 237 44.7
Glyma.14G215400 Glycine max HOM05D006243 ORTHO05D007688 4.6e-44 183.0 208 45.7
PGR004G2672 Punica granatum HOM05D006243 ORTHO05D007688 2.3e-43 180.6 285 46.0
Ca_05826_v3 Cicer arietinum L. HOM05D006243 ORTHO05D007688 5.1e-43 179.5 308 44.2
Nitab4.5_0000201g0240 Nicotiana tabacum HOM05D006243 ORTHO05D007688 3.8e-38 163.3 233 44.2
CBR_g27960 Chara braunii HOM05D006243 ORTHO05D007688 3.5e-36 156.8 210 46.7
MD17G1258600 Malus domestica HOM05D006243 ORTHO05D007688 1.0e-35 155.2 229 41.5
SGA_v2.0_scaffold108G30955 Striga asiatica HOM05D006243 ORTHO05D007688 1.5e-34 151.4 237 40.5
Actinidia17213 Actinidia chinensis HOM05D006243 ORTHO05D007688 4.3e-34 149.8 178 48.9
Ah.10g032360 Amaranthus hybridus HOM05D006243 ORTHO05D007688 7.3e-34 149.1 119 62.2
Sed0013436 Sechium edule HOM05D006243 ORTHO05D007688 1.5e-31 141.4 290 41.4
Thhalv10018612m.g Eutrema salsugineum HOM05D006243 ORTHO05D007688 1.1e-29 135.2 183 42.1
VMungo0647G1521 Vigna mungo HOM05D006243 ORTHO05D007688 1.6e-28 131.3 103 64.1
Nitab4.5_0009518g0020 Nicotiana tabacum HOM05D006243 ORTHO05D007688 2.1e-28 131.0 233 39.1
Psat2g047960 Pisum sativum HOM05D006243 ORTHO05D007688 1.2e-23 115.2 153 39.9
Lsat_1_v5_gn_2_20381 Lactuca sativa HOM05D006243 ORTHO05D007688 1.1e-16 92.0 90 54.4
RcHm_v2.0_Chr7g0216651 Rosa chinensis HOM05D006243 ORTHO05D007688 1.8e-16 91.3 77 57.1
VMungo0647G1427 Vigna mungo HOM05D006243 ORTHO05D007688 1.6e-12 78.2 76 48.7
Dinv28209 Davidia involucrata HOM05D006243 ORTHO05D007688 3.5e-12 77.0 154 46.8
Lsat_1_v5_gn_9_50281 Lactuca sativa HOM05D006243 ORTHO05D007688 3.1e-08 63.9 60 48.3


User provided reference genes

Program Settings