Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 5.7e-147 524.2 267 100.0
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 2.6e-43 179.9 210 47.1
AagrBONN_evm.TU.Sc2ySwM_117.1072 Anthoceros agrestis HOM05D007171 ORTHO05D008946 1.7e-37 160.6 191 42.4
CBR_g5643 Chara braunii HOM05D062952 ORTHO05D008946 4.8e-29 132.5 215 35.3
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 2.2e-26 123.6 195 35.4
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 4.7e-16 89.4 197 32.0
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 1.8e-15 87.4 191 29.8
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 4.0e-15 86.3 189 31.2
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 4.0e-15 86.3 189 31.2
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 8.8e-15 85.1 190 30.5
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 8.8e-15 85.1 189 31.2
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 1.2e-14 84.7 199 30.2
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 2.0e-14 84.0 198 29.3
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 2.6e-14 83.6 190 30.5
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 3.4e-14 83.2 190 27.9
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 7.5e-14 82.0 192 32.8
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 9.8e-14 81.6 189 31.2
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 9.8e-14 81.6 195 28.7
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 1.3e-13 81.3 197 28.9
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 2.2e-13 80.5 195 28.2
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 2.8e-13 80.1 191 28.8
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 2.8e-13 80.1 191 28.8
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 2.8e-13 80.1 201 28.9
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 2.8e-13 80.1 184 30.4
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 3.7e-13 79.7 191 29.3
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 6.3e-13 79.0 194 28.4
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 8.3e-13 78.6 201 28.4
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 8.3e-13 78.6 195 27.7
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 8.3e-13 78.6 196 31.1
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 1.8e-12 77.4 197 27.9
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 1.8e-12 77.4 216 28.2
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 1.8e-12 77.4 191 26.7
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 4.1e-12 76.3 193 28.5
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 4.1e-12 76.3 191 26.2
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 5.4e-12 75.9 197 26.9
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 7.0e-12 75.5 197 28.4
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 7.0e-12 75.5 192 29.2
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 9.1e-12 75.1 195 25.6
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 1.2e-11 74.7 191 30.4
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 2.0e-11 73.9 197 26.4
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 2.7e-11 73.6 198 26.8
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 2.7e-11 73.6 197 29.4
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 3.5e-11 73.2 197 28.4
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 3.5e-11 73.2 194 28.9
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 4.5e-11 72.8 210 28.6
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 7.7e-11 72.0 191 26.7
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 1.0e-10 71.6 218 27.5
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 1.0e-10 71.6 199 27.6
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 1.3e-10 71.2 195 27.7
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 1.7e-10 70.9 206 29.1
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 1.7e-10 70.9 196 27.0
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 1.7e-10 70.9 197 28.4
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 2.9e-10 70.1 194 28.4
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 2.9e-10 70.1 191 26.7
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 3.8e-10 69.7 197 24.9
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 5.0e-10 69.3 194 27.8
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 5.0e-10 69.3 194 27.8
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 5.0e-10 69.3 200 25.5
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 5.0e-10 69.3 213 25.8
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 6.5e-10 68.9 198 26.3
CBR_g41391 Chara braunii HOM05D062952 ORTHO05D008946 3.2e-09 66.6 158 29.1
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 7.2e-09 65.5 197 25.4
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 2.1e-08 63.9 190 27.9
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 4.7e-08 62.8 148 35.1
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 1.0e-07 61.6 140 26.4
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 1.0e-07 61.6 129 27.1


User provided reference genes

Program Settings