Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c16_11470 Physcomitrium patens HOM05D003155 ORTHO05D043928 4.2e-181 637.9 321 100.0
AagrBONN_evm.TU.Sc2ySwM_344.1369 Anthoceros agrestis HOM05D003155 ORTHO05D004342 2.9e-65 253.1 306 45.1
CBR_g33925 Chara braunii HOM05D003155 ORTHO05D043928 6.8e-62 241.9 339 40.7
Pp3c7_7810 Physcomitrium patens HOM05D009988 ORTHO05D012160 4.6e-10 69.7 160 30.6
SMO115G0210 Selaginella moellendorffii HOM05D009988 ORTHO05D012160 4.6e-10 69.7 202 28.2
ATR0680G358 Amborella trichopoda HOM05D009988 ORTHO05D012160 1.3e-09 68.2 202 26.2
Mapoly0037s0032 Marchantia polymorpha HOM05D009988 ORTHO05D012160 2.3e-09 67.4 117 33.3
MCO03G331 Micromonas commoda HOM05D009988 ORTHO05D012160 8.7e-09 65.5 201 26.9
CDE06G2785 Ceratophyllum demersum HOM05D009988 ORTHO05D012160 1.5e-08 64.7 121 31.4
Pp3c11_20260 Physcomitrium patens HOM05D009988 ORTHO05D012160 3.3e-08 63.5 161 29.8
Zm00001eb094860 Zea mays HOM05D009988 ORTHO05D012160 7.4e-08 62.4 212 25.5
AagrBONN_evm.TU.Sc2ySwM_344.4840 Anthoceros agrestis HOM05D009988 ORTHO05D012160 1.3e-07 61.6 158 28.5
SEGI_34705 Sequoiadendron giganteum HOM05D009988 ORTHO05D012160 1.6e-07 61.2 117 30.8
Cre11.g474750 Chlamydomonas reinhardtii HOM05D009988 ORTHO05D012160 2.8e-07 60.5 221 24.4
Cre01.g031650 Chlamydomonas reinhardtii HOM05D009988 ORTHO05D012160 6.2e-07 59.3 210 25.2
Os07g0417800 Oryza sativa ssp. japonica HOM05D009988 ORTHO05D012160 6.2e-07 59.3 214 26.6
SEGI_09991 Sequoiadendron giganteum HOM05D009988 ORTHO05D012160 6.2e-07 59.3 202 26.7
HPP92_022631 Vanilla planifolia HOM05D009988 ORTHO05D012160 6.2e-07 59.3 217 24.9
CBR_g79 Chara braunii HOM05D009988 ORTHO05D012160 1.4e-06 58.2 212 25.0
SMO356G0098 Selaginella moellendorffii HOM05D009988 ORTHO05D012160 3.1e-06 57.0 75 33.3
MBI17_g17489_MAGBIO Magnolia biondii HOM05D009988 ORTHO05D012160 9.0e-06 55.5 201 23.9


User provided reference genes

Program Settings