Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 9.5e-245 849.7 429 100.0
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 4.6e-122 442.2 424 54.5
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 1.3e-121 440.7 434 56.0
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 5.8e-117 425.2 425 54.8
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 5.4e-107 392.1 390 53.3
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 7.1e-107 391.7 426 48.1
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 9.6e-104 381.3 421 48.2
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 2.1e-103 380.2 417 48.4
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 2.1e-103 380.2 421 49.4
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 2.1e-103 380.2 421 49.4
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 1.4e-102 377.5 417 48.7
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 1.4e-102 377.5 421 48.7
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 2.4e-102 376.7 426 48.8
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 3.1e-102 376.3 408 48.3
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 5.3e-102 375.6 387 49.9
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 1.2e-101 374.4 383 50.9
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 1.2e-101 374.4 409 48.2
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 1.5e-101 374.0 419 48.7
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 1.5e-101 374.0 414 51.0
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 1.5e-101 374.0 418 46.7
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 2.0e-101 373.6 421 47.0
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 2.0e-101 373.6 421 47.7
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 3.4e-101 372.9 418 47.4
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.4e-101 372.5 421 46.8
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 5.8e-101 372.1 418 46.9
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 7.6e-101 371.7 423 48.0
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 7.6e-101 371.7 421 47.0
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 9.9e-101 371.3 420 47.6
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 2.2e-100 370.2 420 47.4
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 2.2e-100 370.2 420 46.7
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 2.2e-100 370.2 421 47.5
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 2.2e-100 370.2 418 46.2
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 2.9e-100 369.8 425 46.6
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 2.9e-100 369.8 413 46.5
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 3.8e-100 369.4 425 45.6
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 3.8e-100 369.4 421 46.8
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 3.8e-100 369.4 415 48.7
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 4.9e-100 369.0 382 50.5
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 1.1e-99 367.9 425 45.6
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 1.9e-99 367.1 411 46.7
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 1.9e-99 367.1 387 50.9
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 3.2e-99 366.3 425 46.1
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 4.2e-99 365.9 418 47.8
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 9.3e-99 364.8 413 48.4
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 9.3e-99 364.8 431 46.2
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 9.3e-99 364.8 407 47.7
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 2.1e-98 363.6 413 47.7
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 2.1e-98 363.6 387 48.8
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 3.5e-98 362.8 415 47.7
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 3.5e-98 362.8 420 46.2
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 4.6e-98 362.5 378 50.5
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 6.0e-98 362.1 425 45.9
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 6.0e-98 362.1 387 48.3
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 7.8e-98 361.7 423 47.3
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 7.8e-98 361.7 422 46.4
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.0e-97 361.3 428 45.1
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 1.0e-97 361.3 419 47.3
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 1.3e-97 360.9 416 48.1
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 2.3e-97 360.1 441 45.4
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 8.7e-97 358.2 425 46.6
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 3.3e-96 356.3 429 46.2
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 5.6e-96 355.5 381 48.3
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 5.6e-96 355.5 415 47.2
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 5.6e-96 355.5 416 47.1
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 1.3e-95 354.4 425 46.4
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 1.3e-95 354.4 419 47.3
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 1.6e-95 354.0 423 46.3
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 8.1e-95 351.7 454 43.6
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 1.1e-94 351.3 454 43.6
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 1.4e-94 350.9 418 45.9
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.8e-94 350.5 464 43.3
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 3.1e-94 349.7 454 42.7
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 9.0e-94 348.2 470 42.3
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 3.4e-93 346.3 426 45.5
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 3.4e-93 346.3 459 43.1
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 6.4e-92 342.0 421 43.9
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 9.3e-91 338.2 371 48.5
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 2.7e-90 336.7 406 47.0
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 1.0e-89 334.7 469 41.8
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 6.7e-89 332.0 418 44.5
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 6.7e-89 332.0 414 45.7
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 3.3e-88 329.7 452 40.9
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 3.3e-88 329.7 422 42.9
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 5.6e-88 328.9 414 45.4
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 9.6e-88 328.2 376 46.8
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 8.1e-87 325.1 336 50.0
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 1.8e-86 323.9 360 48.1
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.0e-86 322.8 444 41.4
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 6.9e-86 322.0 429 41.7
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 2.0e-85 320.5 385 44.7
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 5.8e-85 318.9 451 43.0
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 2.2e-84 317.0 354 47.2
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 2.9e-84 316.6 327 50.8
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 4.6e-82 309.3 316 54.7
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 3.9e-81 306.2 343 48.1
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 1.1e-80 304.7 387 45.2
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.9e-80 303.9 449 40.1
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 5.3e-78 295.8 452 39.2
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 1.2e-74 284.6 386 40.7
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 4.6e-74 282.7 323 48.9
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 1.5e-72 277.7 416 41.8
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.3e-68 264.6 289 49.8
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 5.0e-68 262.7 311 46.6
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 8.5e-68 261.9 426 39.4
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 6.7e-65 252.3 281 48.4
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 1.3e-60 238.0 258 48.4
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 6.5e-60 235.7 319 42.3
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 9.4e-59 231.9 233 54.5
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 3.9e-57 226.5 220 54.1
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 2.0e-56 224.2 258 49.6
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 3.3e-56 223.4 212 54.2
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 1.7e-52 211.1 243 46.9
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 6.5e-52 209.1 312 42.0
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 3.0e-49 200.3 316 38.9
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 9.1e-46 188.7 253 41.9
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 9.1e-46 188.7 231 44.2
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 6.5e-44 182.6 391 35.5
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.2e-42 178.3 364 35.4
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 4.7e-42 176.4 224 43.8
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 4.1e-38 163.3 126 63.5
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 2.9e-36 157.1 179 46.9
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 4.4e-32 143.3 135 50.4
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 3.7e-31 140.2 160 46.9
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 6.3e-31 139.4 167 46.7
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 1.6e-29 134.8 119 53.8
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 4.5e-29 133.3 538 27.3
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 9.8e-24 115.5 369 29.3
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 3.2e-22 110.5 105 50.5
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 4.1e-22 110.2 96 57.3
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 9.5e-19 99.0 73 68.5
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.0e-17 95.5 102 49.0
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 4.1e-14 83.6 164 34.1
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.2e-13 82.0 106 48.1
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 2.8e-10 70.9 104 38.5
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.1e-09 68.9 79 44.3
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.2e-08 65.5 69 40.6
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 7.5e-08 62.8 83 44.6


User provided reference genes

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