Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c16_10120 Physcomitrium patens HOM05D000087 ORTHO05D309661 9.2e-33 142.9 69 100.0
Pp3c7_1390 Physcomitrium patens HOM05D000087 ORTHO05D003401 3.6e-13 77.8 68 54.4
Mapoly0012s0079 Marchantia polymorpha HOM05D000087 ORTHO05D003401 2.1e-08 62.0 59 45.8
ECA240G2733 Erigeron canadensis HOM05D000087 ORTHO05D003401 6.0e-08 60.5 68 42.6
SEGI_05328 Sequoiadendron giganteum HOM05D000087 ORTHO05D003401 6.0e-08 60.5 68 41.2
THA.LOC109116699 Tarenaya hassleriana HOM05D000087 ORTHO05D003401 6.0e-08 60.5 68 42.6
CBR_g29886 Chara braunii HOM05D000087 ORTHO05D003401 1.0e-07 59.7 68 41.2
CBR_g29888 Chara braunii HOM05D000087 ORTHO05D003401 1.0e-07 59.7 68 41.2
CBR_g29890 Chara braunii HOM05D000087 ORTHO05D003401 1.0e-07 59.7 68 41.2
Pp3c1_19710 Physcomitrium patens HOM05D000087 ORTHO05D003401 1.0e-07 59.7 63 41.3
MELO3C022753.2 Cucumis melo HOM05D000087 ORTHO05D003401 1.3e-07 59.3 68 41.2
CsaV3_3G030310 Cucumis sativus L. HOM05D000087 ORTHO05D003401 1.3e-07 59.3 68 41.2
vmacro00065 Vaccinium macrocarpon HOM05D000087 ORTHO05D003401 1.3e-07 59.3 68 39.7
Zm00001eb025460 Zea mays HOM05D000087 ORTHO05D003401 1.3e-07 59.3 68 39.7
ClCG07G002380 Citrullus lanatus HOM05D000087 ORTHO05D003401 1.8e-07 58.9 68 39.7
Eucgr.E01240 Eucalyptus grandis HOM05D000087 ORTHO05D003401 2.3e-07 58.5 68 41.2
HanXRQChr13g0411971 Helianthus annuus HOM05D000087 ORTHO05D003401 2.3e-07 58.5 68 41.2
Lj8C335G8 Lonicera japonica HOM05D000087 ORTHO05D003401 2.3e-07 58.5 68 41.2
Rhsim11G0025500 Rhododendron simsii HOM05D000087 ORTHO05D003401 2.3e-07 58.5 68 39.7
Sed0011281 Sechium edule HOM05D000087 ORTHO05D003401 2.3e-07 58.5 68 39.7
THA.LOC104811036 Tarenaya hassleriana HOM05D000087 ORTHO05D003401 2.3e-07 58.5 68 39.7
CARHR226000 Cardamine hirsuta HOM05D000087 ORTHO05D003401 3.0e-07 58.2 68 41.2
HanXRQChr03g0081211 Helianthus annuus HOM05D000087 ORTHO05D003401 3.0e-07 58.2 68 41.2
Oeu046809.1 Olea europaea HOM05D000087 ORTHO05D003401 3.0e-07 58.2 68 39.7
Sed0011307 Sechium edule HOM05D000087 ORTHO05D003401 3.0e-07 58.2 68 38.2
SGA_v2.0_scaffold89G27404 Striga asiatica HOM05D000087 ORTHO05D003401 3.0e-07 58.2 68 39.7
Actinidia32771 Actinidia chinensis HOM05D000087 ORTHO05D003401 3.9e-07 57.8 68 39.7
ECA246G0307 Erigeron canadensis HOM05D000087 ORTHO05D003401 3.9e-07 57.8 68 38.2
Migut.A00555 Erythranthe guttata HOM05D000087 ORTHO05D003401 3.9e-07 57.8 68 39.7
THA.LOC104798513 Tarenaya hassleriana HOM05D000087 ORTHO05D003401 3.9e-07 57.8 68 39.7
Lsat_1_v5_gn_5_57840 Lactuca sativa HOM05D000087 ORTHO05D003401 5.1e-07 57.4 68 38.2
MD06G1015000 Malus domestica HOM05D000087 ORTHO05D003401 5.1e-07 57.4 68 38.2
Ciclev10000643m.g Citrus clementina HOM05D000087 ORTHO05D003401 6.7e-07 57.0 68 39.7
Cc08_g05190 Coffea canephora HOM05D000087 ORTHO05D003401 6.7e-07 57.0 68 39.7
Hund14345 Selenicereus undatus HOM05D000087 ORTHO05D003401 6.7e-07 57.0 68 39.7
PGSC0003DMG401030861 Solanum tuberosum HOM05D000087 ORTHO05D003401 6.7e-07 57.0 68 39.7
THA.LOC104812724 Tarenaya hassleriana HOM05D000087 ORTHO05D003401 6.7e-07 57.0 68 39.7
Manes.15G186600 Manihot esculenta HOM05D000087 ORTHO05D003401 8.7e-07 56.6 68 38.2
Psat4g108600 Pisum sativum HOM05D000087 ORTHO05D003401 8.7e-07 56.6 68 38.2
TAR375G0334 Trochodendron aralioides HOM05D000087 ORTHO05D003401 8.7e-07 56.6 68 39.7
vmacro14233 Vaccinium macrocarpon HOM05D000087 ORTHO05D003401 8.7e-07 56.6 68 36.8
Thhalv10024685m.g Eutrema salsugineum HOM05D000087 ORTHO05D000439 1.1e-06 56.2 62 43.5
Lsat_1_v5_gn_3_26661 Lactuca sativa HOM05D000087 ORTHO05D003401 1.1e-06 56.2 68 39.7
Lj4g0011592 Lotus japonicus HOM05D000087 ORTHO05D003401 1.1e-06 56.2 68 38.2
RcHm_v2.0_Chr7g0213351 Rosa chinensis HOM05D000087 ORTHO05D003401 1.1e-06 56.2 68 38.2
SalBow8G0073 Salvia bowleyana HOM05D000087 ORTHO05D003401 1.1e-06 56.2 68 38.2
Sp7g16090 Schrenkiella parvula HOM05D000087 ORTHO05D000439 1.1e-06 56.2 62 43.5
unitig_32.g11626 Utricularia gibba HOM05D000087 ORTHO05D003401 1.1e-06 56.2 68 38.2
CARHR224800 Cardamine hirsuta HOM05D000087 ORTHO05D000439 1.5e-06 55.8 62 43.5
FvH4_5g23930 Fragaria vesca HOM05D000087 ORTHO05D003401 1.5e-06 55.8 68 38.2
FAN04G0653 Fragaria x ananassa HOM05D000087 ORTHO05D003401 1.5e-06 55.8 68 38.2
FAN13G2661 Fragaria x ananassa HOM05D000087 ORTHO05D003401 1.5e-06 55.8 68 38.2
FAN18G2969 Fragaria x ananassa HOM05D000087 ORTHO05D003401 1.5e-06 55.8 68 38.2
FAN18G3273 Fragaria x ananassa HOM05D000087 ORTHO05D003401 1.5e-06 55.8 68 38.2
Prupe.5G021100 Prunus persica HOM05D000087 ORTHO05D003401 1.5e-06 55.8 68 38.2
AT4G18030 Arabidopsis thaliana HOM05D000087 ORTHO05D000439 1.9e-06 55.5 62 41.9
Carub.0007s2330 Capsella rubella HOM05D000087 ORTHO05D000439 1.9e-06 55.5 62 41.9
FAN08G0664 Fragaria x ananassa HOM05D000087 ORTHO05D003401 1.9e-06 55.5 68 38.2
Manes.17G007800 Manihot esculenta HOM05D000087 ORTHO05D003401 1.9e-06 55.5 68 36.8
Medtr8g071280 Medicago truncatula HOM05D000087 ORTHO05D003401 1.9e-06 55.5 68 36.8
PGR042G2111 Punica granatum HOM05D000087 ORTHO05D003401 1.9e-06 55.5 68 38.2
Rhsim07G0138600 Rhododendron simsii HOM05D000087 ORTHO05D003401 1.9e-06 55.5 68 36.8
Actinidia14744 Actinidia chinensis HOM05D000087 ORTHO05D003401 2.5e-06 55.1 68 38.2
Actinidia18159 Actinidia chinensis HOM05D000087 ORTHO05D003401 2.5e-06 55.1 68 38.2
AL7G36420 Arabidopsis lyrata HOM05D000087 ORTHO05D000439 2.5e-06 55.1 62 41.9
arahy.Tifrunner.gnm1.ann1.R5GTQI Arachis hypogaea HOM05D000087 ORTHO05D003401 2.5e-06 55.1 68 38.2
BcaC09g51439 Brassica carinata HOM05D000087 ORTHO05D003401 2.5e-06 55.1 68 39.7
A08p14160 Brassica napus HOM05D000087 ORTHO05D003401 2.5e-06 55.1 68 39.7
BolC1t01284H Brassica oleracea HOM05D000087 ORTHO05D003401 2.5e-06 55.1 68 39.7
Ca_22481_v3 Cicer arietinum L. HOM05D000087 ORTHO05D003401 2.5e-06 55.1 68 38.2
Ca_30350_v3 Cicer arietinum L. HOM05D000087 ORTHO05D003401 2.5e-06 55.1 68 38.2
HanXRQChr12g0384031 Helianthus annuus HOM05D000087 ORTHO05D003401 2.5e-06 55.1 68 36.8
Nitab4.5_0003739g0010 Nicotiana tabacum HOM05D000087 ORTHO05D003401 2.5e-06 55.1 68 38.2
Os04g0218400 Oryza sativa ssp. japonica HOM05D000087 ORTHO05D014740 2.5e-06 55.1 68 36.8
unitig_747.g21370 Utricularia gibba HOM05D000087 ORTHO05D003401 2.5e-06 55.1 68 36.8
BcaC09g51557 Brassica carinata HOM05D000087 ORTHO05D000439 3.3e-06 54.7 62 41.9
BcaNung00035 Brassica carinata HOM05D000087 ORTHO05D005379 3.3e-06 54.7 62 41.9
A01p10060 Brassica napus HOM05D000087 ORTHO05D000439 3.3e-06 54.7 62 41.9
C01p11880 Brassica napus HOM05D000087 ORTHO05D000439 3.3e-06 54.7 62 41.9
BolC1t01163H Brassica oleracea HOM05D000087 ORTHO05D000439 3.3e-06 54.7 62 41.9
BraA01t00952Z Brassica rapa HOM05D000087 ORTHO05D000439 3.3e-06 54.7 62 41.9
CDE04G0289 Ceratophyllum demersum HOM05D000087 ORTHO05D003401 3.3e-06 54.7 68 39.7
Dinv28017 Davidia involucrata HOM05D000087 ORTHO05D003401 3.3e-06 54.7 68 38.2
Duzib205G0534 Durio zibethinus HOM05D000087 ORTHO05D003401 3.3e-06 54.7 68 36.8
HanXRQChr03g0081711 Helianthus annuus HOM05D000087 ORTHO05D003401 3.3e-06 54.7 68 39.7
Hund11147 Selenicereus undatus HOM05D000087 ORTHO05D003401 3.3e-06 54.7 68 38.2
Sc07g0008210 Simmondsia chinensis HOM05D000087 ORTHO05D003401 3.3e-06 54.7 68 36.8
Sc22g0002010 Simmondsia chinensis HOM05D000087 ORTHO05D003401 3.3e-06 54.7 68 36.8
Solyc08g075870.3 Solanum lycopersicum HOM05D000087 ORTHO05D003401 3.3e-06 54.7 68 38.2
Sopen08g024510 Solanum pennellii HOM05D000087 ORTHO05D003401 3.3e-06 54.7 68 38.2
arahy.Tifrunner.gnm1.ann1.FI6I6T Arachis hypogaea HOM05D000087 ORTHO05D003401 4.3e-06 54.3 68 38.2
MSTRG.25726 Avicennia marina HOM05D000087 ORTHO05D003401 4.3e-06 54.3 68 36.8
BcaNung03080 Brassica carinata HOM05D000087 ORTHO05D003401 4.3e-06 54.3 68 38.2
A03p51720 Brassica napus HOM05D000087 ORTHO05D003401 4.3e-06 54.3 68 38.2
C07p50240 Brassica napus HOM05D000087 ORTHO05D003401 4.3e-06 54.3 68 38.2
BolC7t45527H Brassica oleracea HOM05D000087 ORTHO05D003401 4.3e-06 54.3 68 38.2
BraA03t14259Z Brassica rapa HOM05D000087 ORTHO05D003401 4.3e-06 54.3 68 38.2
COL.COLO4_16839 Corchorus olitorius HOM05D000087 ORTHO05D003401 4.3e-06 54.3 68 36.8
Glyma.16G074700 Glycine max HOM05D000087 ORTHO05D003401 4.3e-06 54.3 68 36.8
Peaxi162Scf00045g00533 Petunia axillaris HOM05D000087 ORTHO05D003401 4.3e-06 54.3 68 36.8
Solyc08g005490.3 Solanum lycopersicum HOM05D000087 ORTHO05D003401 4.3e-06 54.3 68 36.8
Sopen08g001520 Solanum pennellii HOM05D000087 ORTHO05D003401 4.3e-06 54.3 68 36.8
PGSC0003DMG400018465 Solanum tuberosum HOM05D000087 ORTHO05D003401 4.3e-06 54.3 68 36.8
TPR.G31160 Trifolium pratense HOM05D000087 ORTHO05D003401 4.3e-06 54.3 68 36.8
CSS0010388 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D003401 5.6e-06 53.9 68 36.8
Eucgr.D02595 Eucalyptus grandis HOM05D000087 ORTHO05D003401 5.6e-06 53.9 68 36.8
SEGI_20918 Sequoiadendron giganteum HOM05D000087 ORTHO05D003401 5.6e-06 53.9 63 41.3
GSVIVG01022775001 Vitis vinifera HOM05D000087 ORTHO05D003401 5.6e-06 53.9 68 36.8
Ah.12g055770 Amaranthus hybridus HOM05D000087 ORTHO05D003401 7.4e-06 53.5 68 36.8
Aqoxy3G02016 Aquilegia oxysepala HOM05D000087 ORTHO05D003401 7.4e-06 53.5 68 36.8
AL7G34970 Arabidopsis lyrata HOM05D000087 ORTHO05D003401 7.4e-06 53.5 68 38.2
MSTRG.11884 Avicennia marina HOM05D000087 ORTHO05D003401 7.4e-06 53.5 68 35.3
BcaC01g00599 Brassica carinata HOM05D000087 ORTHO05D003401 7.4e-06 53.5 68 38.2
A01p11080 Brassica napus HOM05D000087 ORTHO05D003401 7.4e-06 53.5 68 38.2
C01p13100 Brassica napus HOM05D000087 ORTHO05D003401 7.4e-06 53.5 68 38.2
C03p81740 Brassica napus HOM05D000087 ORTHO05D003401 7.4e-06 53.5 68 38.2
BolC3t20445H Brassica oleracea HOM05D000087 ORTHO05D003401 7.4e-06 53.5 68 38.2
BraA01t01055Z Brassica rapa HOM05D000087 ORTHO05D003401 7.4e-06 53.5 68 38.2
Thhalv10024718m.g Eutrema salsugineum HOM05D000087 ORTHO05D003401 7.4e-06 53.5 68 38.2
Nitab4.5_0000108g0440 Nicotiana tabacum HOM05D000087 ORTHO05D003401 7.4e-06 53.5 68 36.8
Sp7g17820 Schrenkiella parvula HOM05D000087 ORTHO05D003401 7.4e-06 53.5 68 38.2
Aa31LG6G1800 Aethionema arabicum HOM05D000087 ORTHO05D003401 9.6e-06 53.1 68 36.8
Aqoxy3G02503 Aquilegia oxysepala HOM05D000087 ORTHO05D000439 9.6e-06 53.1 62 41.9
BcaB04g18530 Brassica carinata HOM05D000087 ORTHO05D003401 9.6e-06 53.1 68 38.2
BraA08t33410Z Brassica rapa HOM05D000087 ORTHO05D003401 9.6e-06 53.1 66 39.4
Phvul.003G280100 Phaseolus vulgaris HOM05D000087 ORTHO05D003401 9.6e-06 53.1 66 37.9
QL12p000797 Quercus lobata HOM05D000087 ORTHO05D003401 9.6e-06 53.1 68 36.8
TWI56G0436 Tripterygium wilfordii HOM05D000087 ORTHO05D003401 9.6e-06 53.1 68 36.8


User provided reference genes

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