Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_6590 Physcomitrium patens HOM05D003347 ORTHO05D003821 1.2e-51 207.6 264 100.0
Pp3c9_6610 Physcomitrium patens HOM05D003347 ORTHO05D003821 3.8e-34 149.4 264 74.6
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 7.1e-17 92.0 186 52.7
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 3.0e-15 86.7 186 64.0
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 8.7e-15 85.1 186 66.7
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.1e-14 84.7 186 64.5
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 2.5e-14 83.6 186 60.8
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 3.3e-14 83.2 171 60.2
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 4.3e-14 82.8 187 58.3
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 4.3e-14 82.8 163 63.2
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 4.3e-14 82.8 163 63.2
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 9.6e-14 81.6 162 69.8
Mapoly0020s0030 Marchantia polymorpha HOM05D003347 ORTHO05D003821 9.6e-14 81.6 186 71.5
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 1.3e-13 81.3 188 56.9
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 1.6e-13 80.9 186 61.8
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 2.8e-13 80.1 181 61.3
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 1.1e-12 78.2 87 57.5
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.8e-12 77.4 187 60.4
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 2.4e-12 77.0 186 58.6
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 3.1e-12 76.6 182 64.3
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 3.1e-12 76.6 87 54.0
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 3.1e-12 76.6 186 58.6
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 3.1e-12 76.6 188 48.4
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 1.5e-11 74.3 164 64.6
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 1.5e-11 74.3 65 61.5
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 1.5e-11 74.3 87 49.4
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 2.6e-11 73.6 187 55.6
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 3.4e-11 73.2 187 62.6
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 3.4e-11 73.2 64 62.5
SMO163G0068 Selaginella moellendorffii HOM05D003347 ORTHO05D003821 3.4e-11 73.2 163 50.3
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 7.6e-11 72.0 183 48.1
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 7.6e-11 72.0 65 60.0
Phvul.006G214600 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 7.6e-11 72.0 186 62.9
AagrBONN_evm.TU.Sc2ySwM_228.2461 Anthoceros agrestis HOM05D003347 ORTHO05D003821 1.3e-10 71.2 163 73.0
Medtr2g007150 Medicago truncatula HOM05D003347 ORTHO05D003821 2.2e-10 70.5 187 63.1
vmacro01761 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 2.2e-10 70.5 64 57.8
Hma1.2p1_0930F.1_g238020 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 3.8e-10 69.7 87 51.7
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 3.8e-10 69.7 63 61.9
Cpa.g.sc37.62 Carica papaya HOM05D003347 ORTHO05D003821 8.5e-10 68.6 64 54.7
SEGI_15810 Sequoiadendron giganteum HOM05D003347 ORTHO05D003821 8.5e-10 68.6 181 66.9
Cc02_g22510 Coffea canephora HOM05D003347 ORTHO05D003821 1.9e-09 67.4 163 54.0
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 2.5e-09 67.0 159 63.5
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 2.5e-09 67.0 67 58.2
ECA236G0662 Erigeron canadensis HOM05D003347 ORTHO05D003821 3.2e-09 66.6 187 52.4
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 5.5e-09 65.9 87 48.3
Cfa005522 Carpinus fangiana HOM05D003347 ORTHO05D003821 5.5e-09 65.9 187 62.0
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 5.5e-09 65.9 60 60.0
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 7.2e-09 65.5 87 48.3
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 7.2e-09 65.5 87 48.3
Potri.019G001900 Populus trichocarpa HOM05D003347 ORTHO05D003821 7.2e-09 65.5 62 58.1
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 9.3e-09 65.1 159 61.6
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 9.3e-09 65.1 65 56.9
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 2.1e-08 63.9 67 53.7
QL11p018508 Quercus lobata HOM05D003347 ORTHO05D003821 2.1e-08 63.9 162 66.0
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 2.7e-08 63.5 70 51.4
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 2.7e-08 63.5 70 55.7
EL10Ac4g09689 Beta vulgaris HOM05D003347 ORTHO05D003821 3.6e-08 63.2 62 58.1
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 3.6e-08 63.2 186 59.7
TWI59G0889 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 3.6e-08 63.2 87 44.8
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 4.6e-08 62.8 86 48.8
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 6.1e-08 62.4 187 38.5
SGA_v2.0_scaffold1G00306 Striga asiatica HOM05D003347 ORTHO05D003821 1.0e-07 61.6 179 60.3
Atru.chr4.1125 Acer truncatum HOM05D003347 ORTHO05D003821 1.8e-07 60.8 60 53.3
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.8e-07 60.8 87 41.4
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 1.8e-07 60.8 187 57.2
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 2.3e-07 60.5 56 57.1
Hma1.2p1_1197F.1_g266100 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 2.3e-07 60.5 58 55.2
Hund12985 Selenicereus undatus HOM05D003347 ORTHO05D003821 3.9e-07 59.7 60 53.3
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 5.1e-07 59.3 58 55.2
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 6.7e-07 58.9 64 51.6
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 1.1e-06 58.2 186 57.5
Dinv19368 Davidia involucrata HOM05D003347 ORTHO05D003821 1.5e-06 57.8 133 71.4
TPR.G2109 Trifolium pratense HOM05D003347 ORTHO05D003821 1.5e-06 57.8 187 59.9
FAN19G3034 Fragaria x ananassa HOM05D003347 ORTHO05D003821 1.9e-06 57.4 72 54.2
Potri.001G306100 Populus trichocarpa HOM05D003347 ORTHO05D003821 1.9e-06 57.4 61 54.1
Gohir.D04G172100 Gossypium hirsutum HOM05D003347 ORTHO05D003821 3.3e-06 56.6 186 54.8
Lj4A831G75 Lonicera japonica HOM05D003347 ORTHO05D003821 3.3e-06 56.6 46 63.0
Sed0005094 Sechium edule HOM05D003347 ORTHO05D003821 4.3e-06 56.2 187 57.8
Psat5g058160 Pisum sativum HOM05D003347 ORTHO05D003821 9.7e-06 55.1 60 50.0


User provided reference genes

Program Settings