Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_5840 Physcomitrium patens HOM05D005473 ORTHO05D006543 3.4e-205 718.4 448 100.0
SMO202G0044 Selaginella moellendorffii HOM05D005473 ORTHO05D006543 1.9e-49 201.1 405 32.3
AagrBONN_evm.TU.Sc2ySwM_344.5342 Anthoceros agrestis HOM05D005473 ORTHO05D006543 1.7e-47 194.5 428 31.1
SEGI_09717 Sequoiadendron giganteum HOM05D005473 ORTHO05D006543 4.3e-46 189.9 442 31.2
GSVIVG01011804001 Vitis vinifera HOM05D005473 ORTHO05D006543 1.4e-41 174.9 461 28.0
Aa31LG7G6980 Aethionema arabicum HOM05D005473 ORTHO05D006543 7.1e-41 172.6 426 27.5
Lj5g0028089 Lotus japonicus HOM05D005473 ORTHO05D006543 7.1e-41 172.6 432 29.9
ATR0691G101 Amborella trichopoda HOM05D005473 ORTHO05D006543 9.2e-41 172.2 444 32.0
Dinv04903 Davidia involucrata HOM05D005473 ORTHO05D006543 9.2e-41 172.2 423 28.8
Gohir.D05G319500 Gossypium hirsutum HOM05D005473 ORTHO05D006543 7.8e-40 169.1 450 29.1
ClCG05G022330 Citrullus lanatus HOM05D005473 ORTHO05D006543 1.3e-39 168.3 424 29.2
arahy.Tifrunner.gnm1.ann1.45PR62 Arachis hypogaea HOM05D005473 ORTHO05D006543 1.7e-39 167.9 425 28.9
Ciclev10015542m.g Citrus clementina HOM05D005473 ORTHO05D006543 1.7e-39 167.9 421 28.7
VMungo0720G0454 Vigna mungo HOM05D005473 ORTHO05D006543 1.7e-39 167.9 414 29.0
Glyma.20G123200 Glycine max HOM05D005473 ORTHO05D006543 2.3e-39 167.5 433 30.5
MSTRG.875 Avicennia marina HOM05D005473 ORTHO05D006543 5.1e-39 166.4 449 29.6
Sed0015008 Sechium edule HOM05D005473 ORTHO05D006543 5.1e-39 166.4 449 29.0
Gorai.009G342800 Gossypium raimondii HOM05D005473 ORTHO05D006543 6.6e-39 166.0 450 28.9
Prupe.1G320100 Prunus persica HOM05D005473 ORTHO05D006543 1.1e-38 165.2 449 27.8
TAR622G1045 Trochodendron aralioides HOM05D005473 ORTHO05D006543 1.1e-38 165.2 452 29.0
Potri.008G126400 Populus trichocarpa HOM05D005473 ORTHO05D006543 2.5e-38 164.1 422 29.4
Sabra16G0274100 Salix brachista HOM05D005473 ORTHO05D006543 2.5e-38 164.1 446 27.8
Gohir.A05G317600 Gossypium hirsutum HOM05D005473 ORTHO05D006543 4.3e-38 163.3 457 28.7
Thecc.02G215500 Theobroma cacao HOM05D005473 ORTHO05D006543 4.3e-38 163.3 421 28.7
Lalb_Chr06g0165731 Lupinus albus HOM05D005473 ORTHO05D006543 5.6e-38 162.9 442 28.7
MBI16_g29822_MAGBIO Magnolia biondii HOM05D005473 ORTHO05D006543 5.6e-38 162.9 428 28.5
arahy.Tifrunner.gnm1.ann1.GULV0C Arachis hypogaea HOM05D005473 ORTHO05D006543 9.5e-38 162.2 425 28.5
CiPaw.05G245400 Carya illinoinensis HOM05D005473 ORTHO05D006543 9.5e-38 162.2 424 29.2
Phvul.007G034400 Phaseolus vulgaris HOM05D005473 ORTHO05D006543 9.5e-38 162.2 413 28.1
Sabra08G0095200 Salix brachista HOM05D005473 ORTHO05D006543 9.5e-38 162.2 446 27.8
TPR.G4908 Trifolium pratense HOM05D005473 ORTHO05D006543 9.5e-38 162.2 423 29.6
Lsat_1_v5_gn_3_54040 Lactuca sativa HOM05D005473 ORTHO05D006543 1.6e-37 161.4 425 30.6
HPP92_020137 Vanilla planifolia HOM05D005473 ORTHO05D006543 1.6e-37 161.4 447 29.8
AL1G36530 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 2.1e-37 161.0 420 27.1
AT1G22970 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 2.1e-37 161.0 420 26.4
CSS0031478 Camellia sinensis var. sinensis HOM05D005473 ORTHO05D006543 2.1e-37 161.0 449 27.8
Nn4g24024 Nelumbo nucifera HOM05D005473 ORTHO05D006543 2.1e-37 161.0 424 30.7
Ca_30210_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 2.8e-37 160.6 424 29.0
CsaV3_5G034770 Cucumis sativus L. HOM05D005473 ORTHO05D006543 2.8e-37 160.6 452 27.4
Migut.L01020 Erythranthe guttata HOM05D005473 ORTHO05D006543 2.8e-37 160.6 437 29.3
vmacro01424 Vaccinium macrocarpon HOM05D005473 ORTHO05D006543 2.8e-37 160.6 455 28.1
CAN.G1489.13 Capsicum annuum HOM05D005473 ORTHO05D006543 3.6e-37 160.2 424 29.5
SalBow8G1667 Salvia bowleyana HOM05D005473 ORTHO05D006543 6.2e-37 159.5 449 28.5
CARHR023350 Cardamine hirsuta HOM05D005473 ORTHO05D006543 1.1e-36 158.7 420 27.4
COL.COLO4_20121 Corchorus olitorius HOM05D005473 ORTHO05D006543 1.1e-36 158.7 423 28.4
CDE07G0910 Ceratophyllum demersum HOM05D005473 ORTHO05D006543 1.4e-36 158.3 411 29.0
QL01p003042 Quercus lobata HOM05D005473 ORTHO05D006543 1.4e-36 158.3 426 28.2
Eucgr.K00649 Eucalyptus grandis HOM05D005473 ORTHO05D006543 1.8e-36 157.9 439 29.4
Hma1.2p1_0114F.1_g055460 Hydrangea macrophylla HOM05D005473 ORTHO05D006543 1.8e-36 157.9 440 29.1
PGSC0003DMG400030516 Solanum tuberosum HOM05D005473 ORTHO05D006543 1.8e-36 157.9 424 28.5
Carub.0001s2247 Capsella rubella HOM05D005473 ORTHO05D006543 2.3e-36 157.5 420 26.4
Cfa015813 Carpinus fangiana HOM05D000048 ORTHO05D000207 4.0e-36 156.8 425 28.9
Oeu059511.2 Olea europaea HOM05D005473 ORTHO05D006543 5.2e-36 156.4 427 29.0
A09p41740 Brassica napus HOM05D005473 ORTHO05D006543 6.8e-36 156.0 444 26.8
CANSAT01G2653 Cannabis sativa HOM05D005473 ORTHO05D006543 1.5e-35 154.8 445 28.5
THA.LOC104812031 Tarenaya hassleriana HOM05D005473 ORTHO05D006543 1.5e-35 154.8 402 28.4
Medtr1g109070 Medicago truncatula HOM05D005473 ORTHO05D006543 2.0e-35 154.5 423 29.6
PGR119G2355 Punica granatum HOM05D005473 ORTHO05D006543 3.4e-35 153.7 453 28.3
Sc11g0003970 Simmondsia chinensis HOM05D005473 ORTHO05D006543 3.4e-35 153.7 425 27.5
ECA246G4292 Erigeron canadensis HOM05D005473 ORTHO05D006543 4.4e-35 153.3 444 28.4
Solyc05g008520.3 Solanum lycopersicum HOM05D005473 ORTHO05D006543 4.4e-35 153.3 424 28.3
Sopen05g004360 Solanum pennellii HOM05D005473 ORTHO05D006543 4.4e-35 153.3 424 28.3
Atru.chr11.335 Acer truncatum HOM05D005473 ORTHO05D006543 5.8e-35 152.9 438 28.1
FAN17G2750 Fragaria x ananassa HOM05D005473 ORTHO05D006543 7.6e-35 152.5 453 27.2
PSO017G4790 Papaver somniferum HOM05D005473 ORTHO05D006543 7.6e-35 152.5 430 27.7
RcHm_v2.0_Chr4g0434011 Rosa chinensis HOM05D005473 ORTHO05D006543 7.6e-35 152.5 451 28.4
Cc11_g09260 Coffea canephora HOM05D005473 ORTHO05D006543 9.9e-35 152.1 445 28.8
HanXRQChr15g0477691 Helianthus annuus HOM05D005473 ORTHO05D006543 9.9e-35 152.1 449 26.9
SGA_v2.0_scaffold50G18546 Striga asiatica HOM05D005473 ORTHO05D006543 9.9e-35 152.1 425 27.3
AT1G71150 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 1.3e-34 151.8 430 26.3
BraA09t39663Z Brassica rapa HOM05D005473 ORTHO05D006543 1.3e-34 151.8 444 25.9
AUR62002772 Chenopodium quinoa HOM05D005473 ORTHO05D006543 1.3e-34 151.8 451 27.5
Manes.14G109600 Manihot esculenta HOM05D005473 ORTHO05D006543 1.7e-34 151.4 425 28.5
FAN12G0751 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.9e-34 150.6 426 27.0
FAN12G1468 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.9e-34 150.6 426 27.0
Dinv16166 Davidia involucrata HOM05D005473 ORTHO05D006543 3.7e-34 150.2 197 42.6
FvH4_4g26380 Fragaria vesca HOM05D005473 ORTHO05D006543 3.7e-34 150.2 426 27.0
BraA07t31315Z Brassica rapa HOM05D005473 ORTHO05D006543 4.9e-34 149.8 417 25.7
AUR62037258 Chenopodium quinoa HOM05D005473 ORTHO05D006543 8.3e-34 149.1 425 28.5
Thhalv10008033m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 8.3e-34 149.1 420 25.7
Sp5g26320 Schrenkiella parvula HOM05D005473 ORTHO05D006543 8.3e-34 149.1 422 26.3
Cpa.g.sc65.93 Carica papaya HOM05D005473 ORTHO05D006543 1.1e-33 148.7 444 26.8
FAN07G2597 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.9e-33 147.9 426 27.0
Peaxi162Scf00205g01024 Petunia axillaris HOM05D000048 ORTHO05D006543 2.4e-33 147.5 384 28.9
Psat6g222680 Pisum sativum HOM05D005473 ORTHO05D006543 2.4e-33 147.5 413 26.9
BcaB07g32295 Brassica carinata HOM05D005473 ORTHO05D006543 3.2e-33 147.1 427 26.2
FAN22G1873 Fragaria x ananassa HOM05D005473 ORTHO05D006543 3.2e-33 147.1 426 26.8
Sp1g20430 Schrenkiella parvula HOM05D005473 ORTHO05D006543 7.1e-33 146.0 201 38.3
Actinidia31990 Actinidia chinensis HOM05D005473 ORTHO05D006543 9.2e-33 145.6 423 28.1
C05p22180 Brassica napus HOM05D005473 ORTHO05D006543 9.2e-33 145.6 448 25.2
PSO478G0709 Papaver somniferum HOM05D005473 ORTHO05D006543 9.2e-33 145.6 420 26.9
EL10Ac6g14276 Beta vulgaris HOM05D005473 ORTHO05D006543 2.1e-32 144.4 442 26.5
AL2G30760 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 4.6e-32 143.3 428 26.6
Atru.chr11.342 Acer truncatum HOM05D005473 ORTHO05D006543 7.8e-32 142.5 412 27.7
Rhsim12G0088500 Rhododendron simsii HOM05D005473 ORTHO05D006543 1.3e-31 141.7 486 25.5
PSO782G5692 Papaver somniferum HOM05D005473 ORTHO05D006543 2.3e-31 141.0 430 25.8
CARHR064450 Cardamine hirsuta HOM05D005473 ORTHO05D006543 3.0e-31 140.6 429 25.2
BcaB03g14874 Brassica carinata HOM05D005473 ORTHO05D006543 6.6e-31 139.4 371 28.6
Os05g0554500 Oryza sativa ssp. japonica HOM05D005473 ORTHO05D006543 1.1e-30 138.7 426 25.6
Carub.0002s1804 Capsella rubella HOM05D005473 ORTHO05D006543 1.5e-30 138.3 422 24.6
Haze_00685 Corylus avellana HOM05D005473 ORTHO05D006543 1.5e-30 138.3 466 26.2
Ah.03g138500 Amaranthus hybridus HOM05D005473 ORTHO05D006543 3.3e-30 137.1 422 25.6
Aqoxy5G03875 Aquilegia oxysepala HOM05D005473 ORTHO05D006543 3.3e-30 137.1 449 27.2
Lj3A877T94 Lonicera japonica HOM05D005473 ORTHO05D006543 5.6e-30 136.3 483 25.7
BolC6t39580H Brassica oleracea HOM05D005473 ORTHO05D006543 1.2e-29 135.2 410 25.1
MELO3C012289.2 Cucumis melo HOM05D005473 ORTHO05D006543 1.2e-29 135.2 391 27.4
DCAR_023622 Daucus carota HOM05D005473 ORTHO05D006543 1.2e-29 135.2 376 28.2
Nitab4.5_0013146g0010 Nicotiana tabacum HOM05D005473 ORTHO05D006543 1.2e-29 135.2 363 29.2
BcaC08g46554 Brassica carinata HOM05D005473 ORTHO05D006543 2.1e-29 134.4 417 24.9
Zm00001eb295130 Zea mays HOM05D005473 ORTHO05D006543 2.8e-29 134.0 181 39.2
BcaC05g26209 Brassica carinata HOM05D005473 ORTHO05D006543 4.7e-29 133.3 451 25.3
Duzib268G1740 Durio zibethinus HOM05D005473 ORTHO05D006543 4.7e-29 133.3 358 28.8
BolC5t30918H Brassica oleracea HOM05D005473 ORTHO05D006543 1.1e-28 132.1 451 25.1
unitig_749.g14005 Utricularia gibba HOM05D005473 ORTHO05D006543 1.1e-28 132.1 385 26.2
Ca_23703_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 9.9e-27 125.6 424 25.7
TWI79G1332 Tripterygium wilfordii HOM05D005473 ORTHO05D006543 1.4e-25 121.7 177 38.4
Potri.010G117100 Populus trichocarpa HOM05D005473 ORTHO05D006543 6.0e-24 116.3 390 25.9
CBR_g3993 Chara braunii HOM05D005493 ORTHO05D007154 7.8e-24 115.9 160 35.0
AL1G36540 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 1.0e-23 115.5 198 31.3
AT1G22980 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 1.7e-23 114.8 209 30.6
Thhalv10018995m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 8.1e-21 105.9 329 25.8
Thecc.02G215400 Theobroma cacao HOM05D005473 ORTHO05D006543 4.2e-17 93.6 316 27.2
A07p37530 Brassica napus HOM05D000048 ORTHO05D006543 7.1e-17 92.8 409 21.8
Migut.O00950 Erythranthe guttata HOM05D005473 ORTHO05D006543 6.0e-16 89.7 300 26.3
Duzib251G0055 Durio zibethinus HOM05D005473 ORTHO05D006543 1.0e-15 89.0 150 34.0
C06p45240 Brassica napus HOM05D000048 ORTHO05D000207 2.3e-15 87.8 117 35.0
Glyma.10G267900 Glycine max HOM05D005473 ORTHO05D006543 2.3e-15 87.8 315 27.3
AagrBONN_evm.TU.Sc2ySwM_117.2697 Anthoceros agrestis HOM05D005473 ORTHO05D006543 8.7e-15 85.9 155 33.5
PSO384G2466 Papaver somniferum HOM05D005473 ORTHO05D006543 5.6e-14 83.2 210 30.0
A01p19890 Brassica napus HOM05D005473 ORTHO05D006543 2.8e-13 80.9 315 22.5
Hund25017 Selenicereus undatus HOM05D005473 ORTHO05D006543 2.6e-11 74.3 119 36.1
Actinidia33629 Actinidia chinensis HOM05D005473 ORTHO05D006543 2.2e-10 71.2 326 23.3
Rhsim03G0134600 Rhododendron simsii HOM05D005473 ORTHO05D006543 1.4e-09 68.6 85 44.7
PSO339G4228 Papaver somniferum HOM05D005473 ORTHO05D006543 1.9e-09 68.2 212 27.4
MCO05G366 Micromonas commoda HOM05D005473 ORTHO05D006543 1.2e-08 65.5 174 26.4


User provided reference genes

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