Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 1.1e-203 713.0 344 100.0
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 2.1e-130 469.5 315 68.9
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 1.2e-128 463.8 297 73.7
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 2.4e-121 439.5 334 63.8
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.4e-121 439.5 334 63.8
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.4e-121 439.5 334 63.8
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 5.3e-121 438.3 336 62.8
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.5e-120 436.8 336 62.5
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 5.8e-120 434.9 335 62.1
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 5.8e-120 434.9 314 65.3
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 1.0e-119 434.1 292 68.8
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.0e-119 434.1 336 62.2
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 2.2e-119 433.0 329 63.2
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 6.5e-119 431.4 328 62.8
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 6.5e-119 431.4 310 65.2
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 1.1e-118 430.6 313 65.2
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 2.5e-118 429.5 336 60.7
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 2.5e-118 429.5 330 62.7
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 4.2e-118 428.7 291 67.4
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 7.2e-118 427.9 318 63.8
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 9.3e-118 427.6 323 63.5
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 1.2e-117 427.2 298 66.4
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 1.6e-117 426.8 293 67.2
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 1.6e-117 426.8 289 68.9
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 2.1e-117 426.4 313 64.5
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 2.7e-117 426.0 291 68.4
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 4.6e-117 425.2 293 66.6
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 6.1e-117 424.9 291 68.0
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 6.1e-117 424.9 326 62.3
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.0e-116 424.1 289 68.2
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 1.3e-116 423.7 293 66.9
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 1.8e-116 423.3 328 62.5
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 2.3e-116 422.9 336 61.0
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 2.3e-116 422.9 324 62.7
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 2.3e-116 422.9 293 66.9
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 3.0e-116 422.5 326 63.2
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 3.9e-116 422.2 320 63.8
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 3.9e-116 422.2 318 63.8
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 5.1e-116 421.8 327 61.5
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 6.7e-116 421.4 289 67.8
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 6.7e-116 421.4 294 66.0
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 8.7e-116 421.0 290 68.3
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 8.7e-116 421.0 311 63.7
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 8.7e-116 421.0 326 62.9
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 1.1e-115 420.6 332 62.7
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 2.5e-115 419.5 289 67.8
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 2.5e-115 419.5 311 63.0
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 2.5e-115 419.5 325 63.1
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 2.5e-115 419.5 343 60.1
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 3.3e-115 419.1 333 60.4
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 3.3e-115 419.1 311 64.0
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 3.3e-115 419.1 326 62.6
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 4.3e-115 418.7 308 63.6
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 5.7e-115 418.3 294 66.7
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 7.4e-115 417.9 323 62.5
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 1.3e-114 417.2 316 63.3
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 1.3e-114 417.2 307 62.9
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 1.3e-114 417.2 293 65.2
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 1.3e-114 417.2 329 60.2
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 4.8e-114 415.2 307 64.8
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 1.1e-113 414.1 322 61.8
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 1.1e-113 414.1 292 65.4
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 1.1e-113 414.1 317 63.4
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 1.4e-113 413.7 332 61.1
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 1.4e-113 413.7 327 61.5
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 5.3e-113 411.8 335 61.2
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 1.2e-112 410.6 293 64.5
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 2.0e-112 409.8 332 59.9
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 7.7e-112 407.9 332 60.8
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 6.5e-111 404.8 330 60.9
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 1.1e-110 404.1 339 59.9
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 2.5e-110 402.9 332 60.5
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 2.5e-110 402.9 319 62.1
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 4.2e-110 402.1 325 60.0
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 4.2e-110 402.1 291 65.3
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 5.5e-110 401.7 319 61.1
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 1.6e-109 400.2 331 60.4
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 1.4e-108 397.1 360 56.7
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 2.0e-107 393.3 338 59.2
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 2.0e-107 393.3 338 59.2
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 8.2e-106 387.9 338 58.0
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 9.1e-105 384.4 338 57.7
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 1.9e-102 376.7 327 57.2
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 4.4e-99 365.5 242 69.8
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 7.4e-99 364.8 240 70.4
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 1.3e-98 364.0 275 61.8
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 5.3e-97 358.6 280 61.8
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 3.5e-96 355.9 280 61.4
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 1.1e-94 350.9 242 66.5
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 5.5e-94 348.6 345 53.6
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 8.0e-93 344.7 272 61.0
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 3.0e-92 342.8 261 62.5
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 6.7e-92 341.7 246 63.4
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 1.1e-91 340.9 252 63.1
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 7.7e-88 328.2 288 57.3
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 1.4e-81 307.4 199 69.3
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 7.0e-81 305.1 264 58.3
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 5.5e-78 295.4 238 60.5
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 1.4e-76 290.8 207 63.3
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.7e-72 276.6 177 67.2
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 3.3e-70 269.6 299 47.5
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 9.5e-70 268.1 305 47.9
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.2e-67 261.2 175 67.4
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 8.3e-66 255.0 234 51.3
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 3.0e-63 246.5 239 50.6
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 2.3e-60 236.9 297 45.8
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 6.2e-45 185.7 137 67.2
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 6.2e-45 185.7 178 54.5
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 4.0e-44 183.0 132 68.2
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.2e-43 181.4 206 49.0
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 4.3e-38 162.9 269 36.8
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 6.2e-37 159.1 284 36.3
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 4.2e-33 146.4 303 34.0
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 2.1e-29 134.0 178 47.2
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 5.3e-28 129.4 137 53.3
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 1.2e-27 128.3 291 32.3
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.6e-27 127.1 133 52.6
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 3.4e-19 100.1 160 34.4
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 2.4e-12 77.4 77 54.5
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 2.6e-11 73.9 68 54.4
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.3e-10 71.6 78 47.4
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 1.9e-09 67.8 59 59.3
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 2.3e-07 60.8 42 64.3


User provided reference genes

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