Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 1.2e-166 589.7 288 100.0
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 7.3e-132 474.2 274 83.9
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 1.5e-97 360.1 260 66.9
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 1.2e-81 307.4 287 53.0
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.2e-81 307.4 266 58.3
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 2.0e-81 306.6 269 55.4
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 3.4e-81 305.8 258 56.2
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 3.4e-81 305.8 250 59.2
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 4.5e-81 305.4 242 59.1
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 5.9e-81 305.1 250 59.2
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 7.6e-81 304.7 242 59.5
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 7.6e-81 304.7 263 56.3
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 1.0e-80 304.3 268 54.9
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 1.0e-80 304.3 244 59.0
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 3.8e-80 302.4 245 58.8
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 5.0e-80 302.0 244 57.8
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 1.4e-79 300.4 249 57.8
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.9e-79 300.1 244 58.6
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.9e-79 300.1 244 58.6
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 3.2e-79 299.3 259 55.6
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 4.2e-79 298.9 259 56.0
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 4.2e-79 298.9 273 55.3
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 4.2e-79 298.9 240 58.3
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 4.2e-79 298.9 271 55.0
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 5.5e-79 298.5 244 58.6
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 5.5e-79 298.5 245 58.0
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 7.2e-79 298.1 271 54.6
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 9.3e-79 297.7 254 55.5
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 9.3e-79 297.7 249 55.8
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 1.6e-78 297.0 244 57.4
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 2.7e-78 296.2 253 55.7
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 3.6e-78 295.8 244 56.6
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 4.6e-78 295.4 244 58.2
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 6.1e-78 295.0 251 56.2
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 1.0e-77 294.3 263 54.8
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 1.3e-77 293.9 256 56.2
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 1.8e-77 293.5 280 52.1
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 2.3e-77 293.1 262 54.6
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 3.0e-77 292.7 245 58.0
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 3.0e-77 292.7 264 54.9
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 3.9e-77 292.4 251 56.2
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 5.1e-77 292.0 251 56.6
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 6.7e-77 291.6 244 57.8
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 6.7e-77 291.6 249 55.4
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 6.7e-77 291.6 245 57.1
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 1.1e-76 290.8 250 56.4
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 1.1e-76 290.8 262 54.2
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 1.5e-76 290.4 259 54.4
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 1.9e-76 290.0 247 55.9
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 1.9e-76 290.0 251 56.2
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 4.3e-76 288.9 260 55.0
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 4.3e-76 288.9 272 52.6
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 5.7e-76 288.5 247 55.1
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 7.4e-76 288.1 267 54.3
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 7.4e-76 288.1 249 57.0
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 7.4e-76 288.1 267 54.3
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 7.4e-76 288.1 267 54.3
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 7.4e-76 288.1 249 57.0
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.6e-75 287.0 240 57.9
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.6e-75 287.0 240 57.9
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 1.6e-75 287.0 244 55.7
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 3.7e-75 285.8 240 57.9
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 4.8e-75 285.4 224 59.8
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 2.4e-74 283.1 246 56.9
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 5.3e-74 282.0 224 61.2
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 2.0e-73 280.0 276 51.4
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 2.6e-73 279.6 292 50.3
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 2.2e-72 276.6 221 59.3
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 9.4e-71 271.2 216 60.2
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 2.1e-70 270.0 247 54.7
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 1.0e-69 267.7 273 52.0
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 1.8e-69 266.9 246 52.0
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 3.9e-69 265.8 245 53.5
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 5.7e-68 261.9 221 56.1
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 2.2e-67 260.0 214 57.5
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 3.7e-67 259.2 208 59.6
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 8.2e-67 258.1 213 56.3
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 6.9e-66 255.0 258 51.2
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 2.6e-65 253.1 199 59.8
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 4.5e-65 252.3 195 62.1
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 1.0e-64 251.1 254 49.6
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 5.0e-64 248.8 217 55.3
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 2.5e-63 246.5 187 62.0
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 2.5e-63 246.5 262 48.5
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.2e-62 244.2 195 61.0
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 2.1e-62 243.4 307 42.0
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 7.9e-62 241.5 253 49.4
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 9.7e-60 234.6 258 47.7
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 5.3e-58 228.8 239 50.6
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 7.0e-58 228.4 250 50.0
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 7.7e-57 224.9 212 53.8
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 2.2e-56 223.4 222 52.3
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 6.5e-56 221.9 182 57.1
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 3.6e-54 216.1 190 55.3
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 4.7e-54 215.7 167 59.9
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 2.4e-50 203.4 189 54.0
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 2.7e-49 199.9 185 54.6
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 1.2e-46 191.0 223 46.2
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 1.4e-34 151.0 128 53.9
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 9.2e-34 148.3 131 55.0
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 2.9e-32 143.3 228 39.0
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 4.0e-29 132.9 108 58.3
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 7.8e-25 118.6 121 51.2
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 3.3e-23 113.2 103 50.5
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 6.8e-21 105.5 107 51.4
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 7.5e-20 102.1 86 51.2
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 2.9e-19 100.1 123 47.2
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 3.2e-18 96.7 86 51.2
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 1.9e-15 87.4 160 35.0
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 1.1e-13 81.6 57 59.6
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 1.9e-10 70.9 80 43.8
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 7.1e-10 68.9 62 46.8
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 2.8e-06 57.0 47 55.3


User provided reference genes

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