Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 0.0e+00 1200.3 600 100.0
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 5.6e-118 429.1 469 49.9
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 4.3e-86 323.2 470 41.7
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 8.2e-85 318.9 470 41.3
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 6.9e-84 315.8 471 41.0
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 3.4e-83 313.5 458 40.2
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 7.6e-83 312.4 475 40.4
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 2.9e-82 310.5 436 41.7
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 3.8e-82 310.1 467 40.0
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 6.5e-82 309.3 410 43.2
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 2.5e-81 307.4 482 39.0
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 2.5e-81 307.4 410 42.9
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 3.2e-81 307.0 458 40.6
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 7.1e-81 305.8 459 39.4
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 7.1e-81 305.8 422 42.2
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 7.1e-81 305.8 480 38.8
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 2.7e-80 303.9 461 39.9
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 4.6e-80 303.1 455 40.0
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 6.1e-80 302.8 461 39.7
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.3e-79 301.6 455 40.0
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 1.3e-79 301.6 464 39.7
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 1.8e-79 301.2 464 39.2
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 1.8e-79 301.2 464 39.9
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 3.0e-79 300.4 417 41.5
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 3.9e-79 300.1 480 38.3
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 6.7e-79 299.3 455 40.0
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 8.7e-79 298.9 459 37.5
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 1.9e-78 297.7 471 38.2
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 4.3e-78 296.6 479 37.0
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 5.7e-78 296.2 458 38.6
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 9.7e-78 295.4 477 37.7
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 2.8e-77 293.9 458 40.2
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 4.8e-77 293.1 476 39.9
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 6.3e-77 292.7 430 39.1
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 6.3e-77 292.7 461 38.8
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 6.3e-77 292.7 458 38.6
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 8.2e-77 292.4 482 38.6
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 8.2e-77 292.4 451 38.1
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 1.1e-76 292.0 472 38.1
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 1.8e-76 291.2 468 38.5
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 2.4e-76 290.8 473 37.8
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 3.1e-76 290.4 470 36.8
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 5.3e-76 289.7 486 37.4
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 6.9e-76 289.3 459 37.9
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 1.5e-75 288.1 432 40.5
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 1.5e-75 288.1 482 39.2
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 2.0e-75 287.7 437 40.5
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 2.0e-75 287.7 456 38.8
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 3.4e-75 287.0 468 38.2
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 4.5e-75 286.6 478 36.6
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 5.9e-75 286.2 463 38.4
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 7.7e-75 285.8 490 36.9
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 7.7e-75 285.8 477 36.9
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 1.0e-74 285.4 454 37.7
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 1.0e-74 285.4 458 38.0
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 1.0e-74 285.4 458 38.0
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 1.3e-74 285.0 482 36.3
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 5.0e-74 283.1 476 35.9
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 5.0e-74 283.1 403 41.4
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 6.5e-74 282.7 451 37.5
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 1.9e-73 281.2 474 35.7
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 1.9e-73 281.2 488 35.9
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 1.9e-73 281.2 452 38.1
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 3.2e-73 280.4 488 36.3
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 1.2e-72 278.5 482 35.9
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 1.6e-72 278.1 488 35.9
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 2.7e-72 277.3 482 35.7
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 3.6e-72 276.9 443 37.9
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 4.6e-72 276.6 401 41.1
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 7.9e-72 275.8 482 37.1
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 3.3e-70 270.4 448 36.6
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 7.4e-70 269.2 462 35.7
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 4.8e-69 266.5 405 36.8
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 6.3e-69 266.2 417 36.5
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 1.4e-68 265.0 448 35.9
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 1.4e-68 265.0 456 35.1
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 1.4e-68 265.0 456 35.1
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 2.4e-68 264.2 461 34.9
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 3.1e-68 263.8 402 37.6
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 1.2e-67 261.9 443 35.2
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 1.2e-67 261.9 387 40.8
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 2.6e-67 260.8 425 36.9
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 4.5e-67 260.0 404 37.4
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 5.9e-67 259.6 407 39.1
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 7.7e-67 259.2 425 36.7
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 2.9e-66 257.3 439 36.9
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 6.5e-66 256.1 431 38.1
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 1.4e-65 255.0 458 35.8
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 9.4e-65 252.3 434 35.9
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 1.2e-64 251.9 310 44.8
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 7.9e-64 249.2 555 32.4
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 1.9e-57 228.0 401 36.7
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 3.2e-57 227.3 401 35.9
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 6.7e-55 219.5 381 36.2
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 2.2e-53 214.5 460 30.9
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 3.5e-51 207.2 349 38.4
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 3.2e-49 200.7 494 29.1
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 8.5e-42 176.0 298 36.9
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 1.1e-41 175.6 188 47.9
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 1.2e-40 172.2 326 35.3
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 7.7e-35 152.9 261 37.9
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 7.5e-30 136.3 166 42.8
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.3e-29 135.6 307 32.6
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.9e-25 121.7 138 46.4
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 4.9e-21 107.1 164 36.0
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 1.9e-20 105.1 89 56.2
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 2.0e-19 101.7 86 57.0
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 1.7e-18 98.6 180 33.9
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 1.1e-17 95.9 216 28.2
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 2.2e-13 81.6 111 42.3
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 1.4e-12 79.0 261 29.1
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 3.6e-08 64.3 221 27.1
PRCOL_00005388 Prasinoderma coloniale HOM05D009988 ORTHO05D012160 1.5e-06 58.9 131 32.1
Pp3c17_2650 Physcomitrium patens HOM05D003998 ORTHO05D005144 3.4e-06 57.8 105 34.3


User provided reference genes

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