Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_23690 Physcomitrium patens HOM05D011382 ORTHO05D312763 1.6e-282 975.3 460 100.0
Pp3c9_24660 Physcomitrium patens HOM05D011382 ORTHO05D312881 3.9e-127 459.1 379 58.3
Pp3c15_23620 Physcomitrium patens HOM05D011382 ORTHO05D311375 1.7e-82 310.8 394 41.6
Pp3c22_15880 Physcomitrium patens HOM05D011382 ORTHO05D313128 2.6e-62 243.8 409 35.9
Pp3c5_2310 Physcomitrium patens HOM05D011382 ORTHO05D315424 2.7e-56 223.8 405 33.8
Pp3c10_1600 Physcomitrium patens HOM05D011382 ORTHO05D317580 4.7e-56 223.0 407 34.2
Pp3c2_32940 Physcomitrium patens HOM05D011382 ORTHO05D316563 8.0e-56 222.2 439 32.6
Pp3c10_1580 Physcomitrium patens HOM05D011382 ORTHO05D315360 1.4e-55 221.5 417 31.9
Pp3c6_7720 Physcomitrium patens HOM05D011382 ORTHO05D308313 3.6e-48 196.8 372 32.0
Pp3c4_22330 Physcomitrium patens HOM05D011382 ORTHO05D314084 4.5e-43 179.9 343 32.4
Pp3c3_330 Physcomitrium patens HOM05D011382 ORTHO05D316477 2.9e-42 177.2 406 31.8
Pp3c24_3650 Physcomitrium patens HOM05D011382 ORTHO05D002895 5.2e-39 166.4 345 32.2
Pp3c18_20430 Physcomitrium patens HOM05D011382 ORTHO05D312826 2.0e-35 154.5 301 32.9
Pp3c9_2230 Physcomitrium patens HOM05D011382 ORTHO05D309008 2.8e-32 144.1 294 33.0
MapolyY_A0023 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.8e-23 114.8 288 27.4
Pp3c24_1980 Physcomitrium patens HOM05D003005 ORTHO05D004563 2.2e-21 107.8 273 26.4
Mapoly0012s0051 Marchantia polymorpha HOM05D018443 ORTHO05D015161 7.0e-20 102.8 312 27.6
AagrBONN_evm.TU.Sc2ySwM_344.2438 Anthoceros agrestis HOM05D002809 ORTHO05D004939 6.0e-19 99.8 296 27.7
Pp3c16_16640 Physcomitrium patens HOM05D011382 ORTHO05D310111 9.5e-17 92.4 353 25.8
Mapoly0019s0019 Marchantia polymorpha HOM05D002809 ORTHO05D004563 2.8e-16 90.9 274 26.3
SMO361G0323 Selaginella moellendorffii HOM05D002809 ORTHO05D004939 2.8e-16 90.9 267 25.1
SMO116G0047 Selaginella moellendorffii HOM05D002809 ORTHO05D004563 3.6e-16 90.5 166 32.5
AagrBONN_evm.TU.Sc2ySwM_228.846 Anthoceros agrestis HOM05D002809 ORTHO05D004939 6.2e-16 89.7 205 30.7
Mapoly0005s0140 Marchantia polymorpha HOM05D002809 ORTHO05D004563 6.2e-16 89.7 278 26.6
Mapoly0101s0058 Marchantia polymorpha HOM05D002809 ORTHO05D004939 6.2e-16 89.7 204 31.9
Mapoly0002s0187 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.8e-15 88.2 285 25.3
Mapoly0033s0124 Marchantia polymorpha HOM05D004302 ORTHO05D004939 1.8e-15 88.2 212 26.4
Pp3c11_18710 Physcomitrium patens HOM05D004302 ORTHO05D004939 6.8e-15 86.3 253 25.7
Pp3c1_27000 Physcomitrium patens HOM05D002809 ORTHO05D004563 6.8e-15 86.3 215 32.1
Pp3c4_21230 Physcomitrium patens HOM05D002809 ORTHO05D050338 1.2e-14 85.5 310 27.7
AagrBONN_evm.TU.Sc2ySwM_228.4047 Anthoceros agrestis HOM05D004302 ORTHO05D010190 2.0e-14 84.7 176 31.8
SMO367G1056 Selaginella moellendorffii HOM05D002809 ORTHO05D030467 2.6e-14 84.3 278 27.0
Pp3c3_5460 Physcomitrium patens HOM05D002809 ORTHO05D004563 1.3e-13 82.0 199 28.6
Pp3c14_23730 Physcomitrium patens HOM05D002809 ORTHO05D004563 2.2e-13 81.3 201 28.9
SEGI_38976 Sequoiadendron giganteum HOM05D002809 ORTHO05D004939 2.9e-13 80.9 167 31.1
Pp3c22_13680 Physcomitrium patens HOM05D007753 ORTHO05D009385 1.9e-12 78.2 166 30.1
Mapoly0137s0025 Marchantia polymorpha HOM05D004302 ORTHO05D004939 3.2e-12 77.4 167 31.7
Pp3c19_15800 Physcomitrium patens HOM05D007753 ORTHO05D009385 4.1e-12 77.0 166 30.7
Pp3c3_33090 Physcomitrium patens HOM05D030659 ORTHO05D009385 5.4e-12 76.6 324 25.6
SEGI_07480 Sequoiadendron giganteum HOM05D005977 ORTHO05D004563 7.1e-12 76.3 219 26.9
Pp3c7_9930 Physcomitrium patens HOM05D002809 ORTHO05D004939 1.6e-11 75.1 136 32.4
Pp3c15_17390 Physcomitrium patens HOM05D002809 ORTHO05D004939 3.5e-11 73.9 199 27.1
SEGI_19660 Sequoiadendron giganteum HOM05D007753 ORTHO05D009385 3.5e-11 73.9 177 27.7
SEGI_20973 Sequoiadendron giganteum HOM05D007753 ORTHO05D009385 3.5e-11 73.9 177 27.7
Mapoly0125s0029 Marchantia polymorpha HOM05D002809 ORTHO05D009091 4.6e-11 73.6 169 30.2
Nn5g28167 Nelumbo nucifera HOM05D002809 ORTHO05D004939 1.0e-10 72.4 167 29.9
Pp3c14_15830 Physcomitrium patens HOM05D002809 ORTHO05D009385 1.7e-10 71.6 152 32.9
Pp3c15_11120 Physcomitrium patens HOM05D002809 ORTHO05D010190 1.7e-10 71.6 197 24.4
Mapoly0045s0085 Marchantia polymorpha HOM05D002809 ORTHO05D004939 5.1e-10 70.1 155 31.0
ATR0763G218 Amborella trichopoda HOM05D005977 ORTHO05D007546 6.6e-10 69.7 201 26.4
Mapoly0045s0086 Marchantia polymorpha HOM05D005977 ORTHO05D009385 8.6e-10 69.3 181 31.5
Pp3c26_2110 Physcomitrium patens HOM05D011382 ORTHO05D318660 1.1e-09 68.9 145 30.3
AagrBONN_evm.TU.Sc2ySwM_117.2857 Anthoceros agrestis HOM05D002809 ORTHO05D004939 1.5e-09 68.6 197 25.9
SMO276G0031 Selaginella moellendorffii HOM05D007753 ORTHO05D009385 3.3e-09 67.4 156 27.6
AagrBONN_evm.TU.Sc2ySwM_369.120 Anthoceros agrestis HOM05D005500 ORTHO05D006906 2.8e-08 64.3 210 28.6
Mapoly0001s0513 Marchantia polymorpha HOM05D008342 ORTHO05D010190 4.7e-08 63.5 153 30.7
AagrBONN_evm.TU.Sc2ySwM_344.5300 Anthoceros agrestis HOM05D002809 ORTHO05D004939 6.2e-08 63.2 193 28.5
Mapoly0063s0077 Marchantia polymorpha HOM05D002809 ORTHO05D004939 1.4e-07 62.0 199 25.1
Mapoly0063s0081 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.4e-07 62.0 203 25.6
EL10Ac2g04421 Beta vulgaris HOM05D004302 ORTHO05D004939 3.1e-07 60.8 238 21.8
DCAR_025461 Daucus carota HOM05D004302 ORTHO05D004939 3.1e-07 60.8 193 22.8
AagrBONN_evm.TU.Sc2ySwM_362.1622 Anthoceros agrestis HOM05D002809 ORTHO05D004563 6.8e-07 59.7 231 23.4
Mapoly0186s0014 Marchantia polymorpha HOM05D004302 ORTHO05D004939 1.2e-06 58.9 142 32.4
AagrBONN_evm.TU.Sc2ySwM_362.2450 Anthoceros agrestis HOM05D002809 ORTHO05D009361 3.4e-06 57.4 253 24.5
SEGI_04786 Sequoiadendron giganteum HOM05D003005 ORTHO05D026051 3.4e-06 57.4 242 21.9
Pp3c2_14180 Physcomitrium patens HOM05D007853 ORTHO05D009873 9.9e-06 55.8 131 33.6


User provided reference genes

Program Settings