Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_22840 Physcomitrium patens HOM05D002114 ORTHO05D002155 0.0e+00 1347.8 802 100.0
Pp3c9_23970 Physcomitrium patens HOM05D002114 ORTHO05D002155 4.0e-305 1051.2 807 74.8
Pp3c9_24030 Physcomitrium patens HOM05D002114 ORTHO05D002155 3.9e-300 1034.6 822 73.2
Pp3c15_24190 Physcomitrium patens HOM05D002114 ORTHO05D002155 5.3e-273 944.5 818 68.7
Mapoly0005s0127 Marchantia polymorpha HOM05D002114 ORTHO05D002155 3.6e-88 330.5 833 40.1
AagrBONN_evm.TU.Sc2ySwM_344.3002 Anthoceros agrestis HOM05D002114 ORTHO05D002155 3.8e-77 293.9 755 41.3
SEGI_12878 Sequoiadendron giganteum HOM05D002114 ORTHO05D002155 2.0e-38 165.2 781 29.6
SEGI_33505 Sequoiadendron giganteum HOM05D002114 ORTHO05D002155 3.8e-37 161.0 827 28.8
SMO271G0165 Selaginella moellendorffii HOM05D002114 ORTHO05D002155 6.9e-31 140.2 766 30.0
Nn1g08551 Nelumbo nucifera HOM05D002114 ORTHO05D002155 7.0e-23 113.6 812 27.1
CBR_g3185 Chara braunii HOM05D002114 ORTHO05D002155 5.5e-20 104.0 928 28.2
MBI06_g01049_MAGBIO Magnolia biondii HOM05D002114 ORTHO05D002155 5.5e-20 104.0 750 27.9
Actinidia39060 Actinidia chinensis HOM05D002114 ORTHO05D002155 1.4e-18 99.4 810 27.0
TAR624G1393 Trochodendron aralioides HOM05D002114 ORTHO05D002155 1.8e-18 99.0 822 27.3
TAR628G1433 Trochodendron aralioides HOM05D002114 ORTHO05D002155 4.0e-18 97.8 769 26.7
Dinv24257 Davidia involucrata HOM05D002114 ORTHO05D002155 5.2e-18 97.4 780 26.9
DCAR_021819 Daucus carota HOM05D002114 ORTHO05D002155 2.6e-17 95.1 815 26.9
Glyma.06G108800 Glycine max HOM05D002114 ORTHO05D002155 3.3e-17 94.7 758 25.5
CSS0004121 Camellia sinensis var. sinensis HOM05D002114 ORTHO05D002155 7.5e-17 93.6 670 28.5
Psat0s411g0160 Pisum sativum HOM05D002114 ORTHO05D002155 7.5e-17 93.6 762 26.0
TAR376G0284 Trochodendron aralioides HOM05D002114 ORTHO05D002155 7.5e-17 93.6 760 26.4
Ca_25760_v3 Cicer arietinum L. HOM05D002114 ORTHO05D002155 1.7e-16 92.4 751 26.0
Dinv19347 Davidia involucrata HOM05D003578 ORTHO05D004021 3.7e-16 91.3 781 27.1
Hma1.2p1_0704F.1_g206810 Hydrangea macrophylla HOM05D002114 ORTHO05D002155 3.7e-16 91.3 610 27.7
Lj1g0012616 Lotus japonicus HOM05D002114 ORTHO05D002155 6.3e-16 90.5 756 25.1
QL12p035256 Quercus lobata HOM05D002114 ORTHO05D002155 8.2e-16 90.1 617 27.2
Gohir.D02G082000 Gossypium hirsutum HOM05D002114 ORTHO05D002155 1.1e-15 89.7 777 25.1
Lj1g0019044 Lotus japonicus HOM05D002114 ORTHO05D002155 1.8e-15 89.0 604 26.2
Gorai.005G091900 Gossypium raimondii HOM05D002114 ORTHO05D002155 2.4e-15 88.6 777 25.4
Manes.18G072900 Manihot esculenta HOM05D002114 ORTHO05D002155 1.6e-14 85.9 629 27.3
arahy.Tifrunner.gnm1.ann1.J4263J Arachis hypogaea HOM05D002114 ORTHO05D002155 2.0e-14 85.5 754 25.1
CiPaw.06G025100 Carya illinoinensis HOM05D002114 ORTHO05D002155 2.0e-14 85.5 754 26.0
Lsat_1_v5_gn_5_109540 Lactuca sativa HOM05D002114 ORTHO05D002155 2.0e-14 85.5 755 27.3
Medtr5g060420 Medicago truncatula HOM05D002114 ORTHO05D002155 2.0e-14 85.5 760 25.1
CsaV3_5G023480 Cucumis sativus L. HOM05D002114 ORTHO05D002155 3.5e-14 84.7 756 26.2
vmacro19904 Vaccinium macrocarpon HOM05D002114 ORTHO05D002155 4.5e-14 84.3 614 28.0
Duzib093G1968 Durio zibethinus HOM05D002114 ORTHO05D002155 5.9e-14 84.0 752 26.5
Manes.02G158800 Manihot esculenta HOM05D002114 ORTHO05D002155 5.9e-14 84.0 769 24.1
arahy.Tifrunner.gnm1.ann1.506V44 Arachis hypogaea HOM05D002114 ORTHO05D002155 7.7e-14 83.6 754 24.4
HanXRQChr11g0337571 Helianthus annuus HOM05D002114 ORTHO05D002155 7.7e-14 83.6 764 25.8
TPR.G30411 Trifolium pratense HOM05D002114 ORTHO05D002155 7.7e-14 83.6 759 24.8
CiPaw.05G228500 Carya illinoinensis HOM05D002114 ORTHO05D002155 1.0e-13 83.2 769 27.0
Cc00_g07850 Coffea canephora HOM05D002114 ORTHO05D002155 1.3e-13 82.8 760 24.9
MELO3C022782.2 Cucumis melo HOM05D002114 ORTHO05D002155 2.9e-13 81.6 760 26.1
PGR042G2981 Punica granatum HOM05D002114 ORTHO05D002155 3.8e-13 81.3 756 25.7
Gohir.A02G074900 Gossypium hirsutum HOM05D002114 ORTHO05D002155 6.5e-13 80.5 617 26.4
VMungo0647G0374 Vigna mungo HOM05D002114 ORTHO05D002155 6.5e-13 80.5 758 24.9
Hma1.2p1_0557F.1_g178290 Hydrangea macrophylla HOM05D002114 ORTHO05D002155 8.5e-13 80.1 762 27.4
THA.LOC104813131 Tarenaya hassleriana HOM05D002114 ORTHO05D002155 8.5e-13 80.1 767 25.0
ClCG03G009150 Citrullus lanatus HOM05D002114 ORTHO05D002155 1.1e-12 79.7 756 25.9
Sabra02G0070100 Salix brachista HOM05D002114 ORTHO05D002155 1.1e-12 79.7 623 27.8
arahy.Tifrunner.gnm1.ann1.KNS6CZ Arachis hypogaea HOM05D002114 ORTHO05D002155 2.5e-12 78.6 625 27.2
Phvul.008G168300 Phaseolus vulgaris HOM05D002114 ORTHO05D002155 2.5e-12 78.6 756 24.7
Psat5g135520 Pisum sativum HOM05D002114 ORTHO05D002155 2.5e-12 78.6 756 25.0
arahy.Tifrunner.gnm1.ann1.6TI2WT Arachis hypogaea HOM05D002114 ORTHO05D002155 4.2e-12 77.8 625 27.2
Gohir.D01G167200 Gossypium hirsutum HOM05D002114 ORTHO05D002155 4.2e-12 77.8 773 25.6
Duzib041G0185 Durio zibethinus HOM05D002114 ORTHO05D002155 5.5e-12 77.4 772 25.5
Potri.002G089100 Populus trichocarpa HOM05D002114 ORTHO05D002155 7.2e-12 77.0 625 27.2
Cc02_g22200 Coffea canephora HOM05D002114 ORTHO05D002155 9.4e-12 76.6 620 26.9
Ca_26445_v3 Cicer arietinum L. HOM05D002114 ORTHO05D002155 1.2e-11 76.3 759 24.1
Duzib248G0335 Durio zibethinus HOM05D002114 ORTHO05D002155 1.2e-11 76.3 619 27.8
Gorai.002G207700 Gossypium raimondii HOM05D002114 ORTHO05D002155 1.2e-11 76.3 775 25.3
MBI03_g11140_MAGBIO Magnolia biondii HOM05D002114 ORTHO05D002155 1.2e-11 76.3 703 27.6
Phvul.008G168200 Phaseolus vulgaris HOM05D002114 ORTHO05D002155 1.2e-11 76.3 756 23.8
Thecc.02G041700 Theobroma cacao HOM05D002114 ORTHO05D002155 1.2e-11 76.3 765 26.7
Potri.005G172100 Populus trichocarpa HOM05D002114 ORTHO05D002155 1.6e-11 75.9 625 28.0
Aqoxy5G02445 Aquilegia oxysepala HOM05D002114 ORTHO05D002155 2.1e-11 75.5 780 26.3
CANSAT25G3390 Cannabis sativa HOM05D002114 ORTHO05D002155 3.6e-11 74.7 751 25.8
Duzib132G0748 Durio zibethinus HOM05D002114 ORTHO05D002155 8.0e-11 73.6 767 25.0
Atru.chr13.1319 Acer truncatum HOM05D002114 ORTHO05D002155 1.0e-10 73.2 773 25.1
Atru.chr13.1363 Acer truncatum HOM05D002114 ORTHO05D002155 1.0e-10 73.2 773 25.1
Sabra05G0129600 Salix brachista HOM05D002114 ORTHO05D002155 1.0e-10 73.2 617 26.4
TWI56G1477 Tripterygium wilfordii HOM05D002114 ORTHO05D002155 1.0e-10 73.2 417 27.3
Cpa.g.sc49.129 Carica papaya HOM05D002114 ORTHO05D002155 1.8e-10 72.4 760 24.7
MELO3C010439.2 Cucumis melo HOM05D002114 ORTHO05D002155 1.8e-10 72.4 524 26.1
Gohir.D06G042000 Gossypium hirsutum HOM05D002114 ORTHO05D002155 2.3e-10 72.0 765 24.2
Gohir.A06G041100 Gossypium hirsutum HOM05D002114 ORTHO05D002155 3.0e-10 71.6 760 25.4
Cfa015960 Carpinus fangiana HOM05D002114 ORTHO05D002155 5.2e-10 70.9 773 24.7
Ciclev10000635m.g Citrus clementina HOM05D002114 ORTHO05D002155 5.2e-10 70.9 617 26.3
ECA234G4340 Erigeron canadensis HOM05D002114 ORTHO05D002155 5.2e-10 70.9 608 27.3
MD15G1358400 Malus domestica HOM05D002114 ORTHO05D002155 5.2e-10 70.9 618 25.2
TAR381G1077 Trochodendron aralioides HOM05D002114 ORTHO05D002155 5.2e-10 70.9 766 26.5
PSO017G4365 Papaver somniferum HOM05D002114 ORTHO05D002155 8.8e-10 70.1 796 25.5
Glyma.14G166100 Glycine max HOM05D002114 ORTHO05D002155 1.2e-09 69.7 753 24.2
Gorai.010G047200 Gossypium raimondii HOM05D002114 ORTHO05D002155 1.5e-09 69.3 764 24.0
Sed0020454 Sechium edule HOM05D002114 ORTHO05D002155 1.5e-09 69.3 610 25.4
THA.LOC104806809 Tarenaya hassleriana HOM05D002114 ORTHO05D002155 1.5e-09 69.3 747 24.4
Glyma.04G253600 Glycine max HOM05D002114 ORTHO05D002155 2.0e-09 68.9 752 24.2
Gohir.A01G176400 Gossypium hirsutum HOM05D002114 ORTHO05D002155 2.0e-09 68.9 783 24.4
Thecc.08G117100 Theobroma cacao HOM05D002114 ORTHO05D002155 2.0e-09 68.9 610 25.2
HanXRQChr16g0513971 Helianthus annuus HOM05D002114 ORTHO05D002155 2.6e-09 68.6 586 27.8
Haze_01621 Corylus avellana HOM05D002114 ORTHO05D002155 3.4e-09 68.2 420 27.9
Migut.B00661 Erythranthe guttata HOM05D002114 ORTHO05D002155 3.4e-09 68.2 783 25.3
PSO170G3865 Papaver somniferum HOM05D002114 ORTHO05D002155 3.4e-09 68.2 781 25.1
TWI36G1025 Tripterygium wilfordii HOM05D002114 ORTHO05D002155 3.4e-09 68.2 766 24.4
Hma1.2p1_0221F.1_g093190 Hydrangea macrophylla HOM05D002114 ORTHO05D002155 4.4e-09 67.8 763 23.2
Prupe.1G505900 Prunus persica HOM05D002114 ORTHO05D002155 4.4e-09 67.8 765 25.4
TPR.G32942 Trifolium pratense HOM05D002114 ORTHO05D002155 5.7e-09 67.4 746 23.7
Medtr3g073280 Medicago truncatula HOM05D002114 ORTHO05D002155 9.8e-09 66.6 621 25.3
Oeu012739.1 Olea europaea HOM05D002114 ORTHO05D002155 1.3e-08 66.2 609 28.4
Lalb_Chr17g0343991 Lupinus albus HOM05D002114 ORTHO05D002155 1.7e-08 65.9 752 23.5
VMungo0647G0978 Vigna mungo HOM05D002114 ORTHO05D002155 1.7e-08 65.9 766 23.5
Glyma.13G084300 Glycine max HOM05D002114 ORTHO05D002155 2.2e-08 65.5 755 25.3
Lalb_Chr04g0253291 Lupinus albus HOM05D002114 ORTHO05D002155 2.2e-08 65.5 756 22.6
HanXRQChr02g0058831 Helianthus annuus HOM05D002114 ORTHO05D002155 2.8e-08 65.1 531 27.7
Duzib116G0235 Durio zibethinus HOM05D002114 ORTHO05D002155 3.7e-08 64.7 773 24.1
Gohir.D05G270000 Gossypium hirsutum HOM05D002114 ORTHO05D002155 4.8e-08 64.3 371 28.0
Dinv26715 Davidia involucrata HOM05D002114 ORTHO05D002155 6.3e-08 63.9 767 23.3
Duzib052G0911 Durio zibethinus HOM05D002114 ORTHO05D002155 6.3e-08 63.9 777 25.2
COL.COLO4_32807 Corchorus olitorius HOM05D002114 ORTHO05D002155 8.3e-08 63.5 541 23.8
Thhalv10003900m.g Eutrema salsugineum HOM05D002114 ORTHO05D002155 8.3e-08 63.5 469 25.6
CDE08G0040 Ceratophyllum demersum HOM05D002114 ORTHO05D002155 1.1e-07 63.2 575 27.0
Haze_00522 Corylus avellana HOM05D002114 ORTHO05D002155 1.4e-07 62.8 609 25.8
MD08G1173100 Malus domestica HOM05D002114 ORTHO05D002155 1.8e-07 62.4 612 25.3
Sp1g31190 Schrenkiella parvula HOM05D002114 ORTHO05D002155 1.8e-07 62.4 465 26.0
Actinidia29430 Actinidia chinensis HOM05D002114 ORTHO05D002155 2.4e-07 62.0 764 25.5
DCAR_029238 Daucus carota HOM05D005050 ORTHO05D006198 3.1e-07 61.6 455 28.4
Sed0018069 Sechium edule HOM05D002114 ORTHO05D002155 3.1e-07 61.6 605 26.8
CiPaw.05G042400 Carya illinoinensis HOM05D002114 ORTHO05D002155 5.4e-07 60.8 488 26.4
Nitab4.5_0000051g0060 Nicotiana tabacum HOM05D002114 ORTHO05D002155 5.4e-07 60.8 760 24.3
MSTRG.16538 Avicennia marina HOM05D002114 ORTHO05D002155 7.0e-07 60.5 517 27.7
THA.LOC104817001 Tarenaya hassleriana HOM05D002114 ORTHO05D002155 9.1e-07 60.1 754 23.7
COL.COLO4_17899 Corchorus olitorius HOM05D002114 ORTHO05D002155 1.2e-06 59.7 773 25.2
HanXRQChr10g0290481 Helianthus annuus HOM05D002114 ORTHO05D002155 1.2e-06 59.7 769 24.6
Actinidia17471 Actinidia chinensis HOM05D002114 ORTHO05D002155 1.6e-06 59.3 794 25.3
Ah.05g172590 Amaranthus hybridus HOM05D002114 ORTHO05D002155 2.0e-06 58.9 762 24.7
Lalb_Chr17g0344001 Lupinus albus HOM05D002114 ORTHO05D002155 3.5e-06 58.2 764 23.6
HPP92_009362 Vanilla planifolia HOM05D002114 ORTHO05D002155 4.5e-06 57.8 757 23.9


User provided reference genes

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