Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_19100 Physcomitrium patens HOM05D007008 ORTHO05D008622 7.1e-53 210.3 104 100.0
Pp3c9_4080 Physcomitrium patens HOM05D007008 ORTHO05D008622 4.2e-45 184.5 104 83.7
Mapoly0112s0015 Marchantia polymorpha HOM05D007008 ORTHO05D008622 3.8e-38 161.4 101 72.3
AagrBONN_evm.TU.Sc2ySwM_344.3123 Anthoceros agrestis HOM05D007008 ORTHO05D008622 1.3e-35 152.9 101 71.3
Rhsim02G0211800 Rhododendron simsii HOM05D007008 ORTHO05D008622 4.3e-34 147.9 101 64.4
Thecc.09G014400 Theobroma cacao HOM05D007008 ORTHO05D008622 9.6e-34 146.7 101 64.4
CiPaw.08G005100 Carya illinoinensis HOM05D007008 ORTHO05D008622 1.3e-33 146.4 101 64.4
Nn2g14020 Nelumbo nucifera HOM05D007008 ORTHO05D008622 1.3e-33 146.4 101 65.3
CBR_g34568 Chara braunii HOM05D007008 ORTHO05D008622 1.6e-33 146.0 92 72.8
Eucgr.C04041 Eucalyptus grandis HOM05D007008 ORTHO05D008622 2.1e-33 145.6 102 64.7
Manes.16G130900 Manihot esculenta HOM05D007008 ORTHO05D008622 2.1e-33 145.6 101 63.4
MSTRG.13965 Avicennia marina HOM05D007008 ORTHO05D008622 4.8e-33 144.4 101 64.4
CDE05G1515 Ceratophyllum demersum HOM05D007008 ORTHO05D008622 4.8e-33 144.4 103 66.0
Manes.03G007600 Manihot esculenta HOM05D007008 ORTHO05D008622 4.8e-33 144.4 102 61.8
Nn8g40044 Nelumbo nucifera HOM05D007008 ORTHO05D008622 4.8e-33 144.4 101 64.4
QL02p018585 Quercus lobata HOM05D007008 ORTHO05D008622 4.8e-33 144.4 101 63.4
CANSAT25G2981 Cannabis sativa HOM05D007008 ORTHO05D008622 6.2e-33 144.1 101 61.4
AT5G10810 Arabidopsis thaliana HOM05D007008 ORTHO05D008622 8.1e-33 143.7 100 64.0
CAN.G906.10 Capsicum annuum HOM05D007008 ORTHO05D008622 8.1e-33 143.7 100 65.0
Glyma.17G224100 Glycine max HOM05D007008 ORTHO05D008622 8.1e-33 143.7 101 63.4
Gohir.D06G104200 Gossypium hirsutum HOM05D007008 ORTHO05D008622 8.1e-33 143.7 101 63.4
Carub.0006s0932 Capsella rubella HOM05D007008 ORTHO05D008622 1.1e-32 143.3 98 65.3
Duzib187G1435 Durio zibethinus HOM05D007008 ORTHO05D008622 1.1e-32 143.3 101 62.4
TWI34G0293 Tripterygium wilfordii HOM05D007008 ORTHO05D008622 1.1e-32 143.3 101 63.4
Zm00001eb078360 Zea mays HOM05D007008 ORTHO05D008622 1.1e-32 143.3 104 60.6
Ciclev10009999m.g Citrus clementina HOM05D007008 ORTHO05D008622 1.4e-32 142.9 101 64.4
Duzib150G0558 Durio zibethinus HOM05D007008 ORTHO05D008622 1.4e-32 142.9 101 62.4
Migut.A00362 Erythranthe guttata HOM05D007008 ORTHO05D008622 1.4e-32 142.9 102 62.7
Phvul.001G040900 Phaseolus vulgaris HOM05D007008 ORTHO05D008622 1.4e-32 142.9 101 63.4
Solyc08g006700.3 Solanum lycopersicum HOM05D007008 ORTHO05D008622 1.4e-32 142.9 101 63.4
PGSC0003DMG400026283 Solanum tuberosum HOM05D007008 ORTHO05D008622 1.4e-32 142.9 101 63.4
Gohir.A06G102300 Gossypium hirsutum HOM05D007008 ORTHO05D008622 1.8e-32 142.5 101 63.4
MSTRG.11785 Avicennia marina HOM05D007008 ORTHO05D008622 2.4e-32 142.1 102 62.7
EL10Ac2g02486 Beta vulgaris HOM05D007008 ORTHO05D008622 2.4e-32 142.1 102 62.7
CARHR202480 Cardamine hirsuta HOM05D007008 ORTHO05D008622 2.4e-32 142.1 98 64.3
Glyma.14G101000 Glycine max HOM05D007008 ORTHO05D008622 2.4e-32 142.1 101 63.4
AL6G21390 Arabidopsis lyrata HOM05D007008 ORTHO05D008622 4.0e-32 141.4 100 62.0
Duzib168G0569 Durio zibethinus HOM05D007008 ORTHO05D008622 4.0e-32 141.4 101 61.4
TAR626G0196 Trochodendron aralioides HOM05D007008 ORTHO05D008622 4.0e-32 141.4 103 61.2
ECA240G3080 Erigeron canadensis HOM05D007008 ORTHO05D008622 5.3e-32 141.0 98 66.3
SGA_v2.0_scaffold4G02166 Striga asiatica HOM05D007008 ORTHO05D008622 5.3e-32 141.0 101 63.4
THA.LOC104799029 Tarenaya hassleriana HOM05D007008 ORTHO05D008622 5.3e-32 141.0 98 65.3
TWI32G0141 Tripterygium wilfordii HOM05D007008 ORTHO05D008622 5.3e-32 141.0 101 61.4
Aa31LG3G16290 Aethionema arabicum HOM05D007008 ORTHO05D008622 6.9e-32 140.6 98 62.2
Aqoxy7G03348 Aquilegia oxysepala HOM05D007008 ORTHO05D008622 6.9e-32 140.6 102 59.8
Thhalv10016011m.g Eutrema salsugineum HOM05D007008 ORTHO05D008622 6.9e-32 140.6 98 63.3
Zm00001eb184500 Zea mays HOM05D007008 ORTHO05D008622 9.0e-32 140.2 104 59.6
Atru.chr7.2552 Acer truncatum HOM05D007008 ORTHO05D008622 1.5e-31 139.4 101 64.4
BolC9t59417H Brassica oleracea HOM05D000238 ORTHO05D001043 2.0e-31 139.0 98 62.2
AUR62024793 Chenopodium quinoa HOM05D007008 ORTHO05D008622 2.0e-31 139.0 99 62.6
Prupe.1G395400 Prunus persica HOM05D007008 ORTHO05D008622 2.0e-31 139.0 101 59.4
PGR044G1005 Punica granatum HOM05D007008 ORTHO05D008622 2.6e-31 138.7 101 61.4
Hund02976 Selenicereus undatus HOM05D007008 ORTHO05D008622 2.6e-31 138.7 99 62.6
SGA_v2.0_scaffold169G38605 Striga asiatica HOM05D007008 ORTHO05D008622 2.6e-31 138.7 100 61.0
BcaB08g37301 Brassica carinata HOM05D000238 ORTHO05D008622 3.4e-31 138.3 98 61.2
SMO367G1120 Selaginella moellendorffii HOM05D007008 ORTHO05D008622 3.4e-31 138.3 98 62.2
TAR383G0422 Trochodendron aralioides HOM05D007008 ORTHO05D008622 3.4e-31 138.3 104 60.6
HanXRQChr17g0538991 Helianthus annuus HOM05D007008 ORTHO05D008622 4.5e-31 137.9 101 62.4
Lalb_Chr22g0361631 Lupinus albus HOM05D007008 ORTHO05D008622 4.5e-31 137.9 98 63.3
BraA10t44733Z Brassica rapa HOM05D000238 ORTHO05D002998 5.8e-31 137.5 98 61.2
TPR.G38860 Trifolium pratense HOM05D007008 ORTHO05D008622 5.8e-31 137.5 98 63.3
Glyma.04G060200 Glycine max HOM05D007008 ORTHO05D008622 7.6e-31 137.1 102 59.8
A02p00680 Brassica napus HOM05D000653 ORTHO05D002177 1.0e-30 136.7 98 60.2
C02p04680 Brassica napus HOM05D000653 ORTHO05D002177 1.0e-30 136.7 98 60.2
C09p65940 Brassica napus HOM05D007008 ORTHO05D008622 1.0e-30 136.7 98 60.2
BolC2t06426H Brassica oleracea HOM05D000238 ORTHO05D001043 1.0e-30 136.7 98 60.2
BraA02t05052Z Brassica rapa HOM05D000238 ORTHO05D001043 1.0e-30 136.7 98 60.2
Lj5g0019856 Lotus japonicus HOM05D007008 ORTHO05D008622 1.0e-30 136.7 98 62.2
Rhsim02G0210500 Rhododendron simsii HOM05D007008 ORTHO05D008622 1.0e-30 136.7 110 58.2
arahy.Tifrunner.gnm1.ann1.ENRJ0V Arachis hypogaea HOM05D007008 ORTHO05D008622 1.3e-30 136.3 100 61.0
Eucgr.L00629 Eucalyptus grandis HOM05D007008 ORTHO05D008622 1.3e-30 136.3 113 57.5
Potri.018G017300 Populus trichocarpa HOM05D007008 ORTHO05D008622 1.3e-30 136.3 101 61.4
Sed0013935 Sechium edule HOM05D007008 ORTHO05D008622 1.3e-30 136.3 100 58.0
FvH4_2g41220 Fragaria vesca HOM05D007008 ORTHO05D008622 1.7e-30 136.0 101 58.4
Glyma.06G060700 Glycine max HOM05D007008 ORTHO05D008622 1.7e-30 136.0 102 59.8
Gohir.A07G033600 Gossypium hirsutum HOM05D007008 ORTHO05D008622 1.7e-30 136.0 101 61.4
Gohir.D07G037200 Gossypium hirsutum HOM05D007008 ORTHO05D008622 1.7e-30 136.0 101 61.4
Gorai.001G038800 Gossypium raimondii HOM05D007008 ORTHO05D008622 1.7e-30 136.0 101 61.4
THA.LOC104824959 Tarenaya hassleriana HOM05D007008 ORTHO05D008622 1.7e-30 136.0 98 63.3
FAN15G2831 Fragaria x ananassa HOM05D000756 ORTHO05D008622 2.2e-30 135.6 101 58.4
FAN27G1693 Fragaria x ananassa HOM05D007008 ORTHO05D008622 2.2e-30 135.6 101 58.4
Sabra06G0208200 Salix brachista HOM05D007008 ORTHO05D008622 2.9e-30 135.2 104 59.6
Oeu006861.2 Olea europaea HOM05D007008 ORTHO05D008622 3.8e-30 134.8 100 59.0
PSO170G4073 Papaver somniferum HOM05D007008 ORTHO05D008622 3.8e-30 134.8 98 61.2
PSO357G0206 Papaver somniferum HOM05D007008 ORTHO05D008622 3.8e-30 134.8 98 61.2
Potri.006G265600 Populus trichocarpa HOM05D007008 ORTHO05D008622 3.8e-30 134.8 101 60.4
RcHm_v2.0_Chr6g0299291 Rosa chinensis HOM05D007008 ORTHO05D008622 4.9e-30 134.4 101 57.4
BcaNung06639 Brassica carinata HOM05D000653 ORTHO05D008622 6.5e-30 134.0 98 58.2
arahy.Tifrunner.gnm1.ann1.K1H867 Arachis hypogaea HOM05D007008 ORTHO05D008622 8.4e-30 133.7 101 59.4
BcaC03g13334 Brassica carinata HOM05D000653 ORTHO05D002177 8.4e-30 133.7 98 59.2
MCO13G493 Micromonas commoda HOM05D007008 ORTHO05D008622 8.4e-30 133.7 98 58.2
Oeu048545.1 Olea europaea HOM05D007008 ORTHO05D008622 8.4e-30 133.7 100 59.0
Sed0015687 Sechium edule HOM05D007008 ORTHO05D008622 8.4e-30 133.7 101 56.4
MD15G1042200 Malus domestica HOM05D007008 ORTHO05D008622 1.1e-29 133.3 101 56.4
HanXRQChr03g0081451 Helianthus annuus HOM05D007008 ORTHO05D008622 2.5e-29 132.1 100 59.0
MD08G1054800 Malus domestica HOM05D007008 ORTHO05D008622 3.2e-29 131.7 101 55.4
Sabra18G0020700 Salix brachista HOM05D007008 ORTHO05D008622 5.5e-29 131.0 105 59.0
Medtr1g014230 Medicago truncatula HOM05D007008 ORTHO05D008622 9.3e-29 130.2 104 56.7
Lsat_1_v5_gn_5_62001 Lactuca sativa HOM05D007008 ORTHO05D008622 1.6e-28 129.4 94 61.7
Sopen08g002640 Solanum pennellii HOM05D007008 ORTHO05D008622 2.7e-28 128.6 92 62.0
Cc11_g00350 Coffea canephora HOM05D007008 ORTHO05D008622 8.7e-27 123.6 93 58.1
PRCOL_00001314 Prasinoderma coloniale HOM05D007008 ORTHO05D008622 1.5e-26 122.9 101 51.5
GSVIVG01035984001 Vitis vinifera HOM05D007008 ORTHO05D008622 1.5e-26 122.9 92 56.5
SMO197G0113 Selaginella moellendorffii HOM05D007008 ORTHO05D008622 3.1e-24 115.2 100 43.0
MELO3C030305.2 Cucumis melo HOM05D007008 ORTHO05D008622 2.6e-23 112.1 87 57.5
COL.COLO4_18962 Corchorus olitorius HOM05D002170 ORTHO05D005003 2.2e-22 109.0 72 66.7
CSS0004043 Camellia sinensis var. sinensis HOM05D007008 ORTHO05D008622 3.8e-22 108.2 74 63.5
Gorai.010G119400 Gossypium raimondii HOM05D007008 ORTHO05D008622 8.4e-22 107.1 74 63.5
HPP92_017465 Vanilla planifolia HOM05D007008 ORTHO05D008622 1.9e-21 105.9 75 60.0
Sp6g32640 Schrenkiella parvula HOM05D000653 ORTHO05D002177 4.2e-21 104.8 70 64.3
AUR62032427 Chenopodium quinoa HOM05D007008 ORTHO05D008622 7.2e-21 104.0 70 67.1
Ah.12g060690 Amaranthus hybridus HOM05D007008 ORTHO05D008622 2.7e-20 102.1 70 62.9
Psat6g026400 Pisum sativum HOM05D007008 ORTHO05D008622 7.9e-20 100.5 71 62.0
CiPaw.07G231200 Carya illinoinensis HOM05D007008 ORTHO05D008622 1.8e-19 99.4 69 60.9
Os04g0499200 Oryza sativa ssp. japonica HOM05D007008 ORTHO05D008622 3.0e-19 98.6 74 55.4
Hund25613 Selenicereus undatus HOM05D007008 ORTHO05D008622 3.0e-19 98.6 74 58.1
SEGI_13302 Sequoiadendron giganteum HOM05D007008 ORTHO05D008622 2.2e-17 92.4 69 58.0
arahy.Tifrunner.gnm1.ann1.T6XV8N Arachis hypogaea HOM05D007008 ORTHO05D008622 2.4e-16 89.0 80 47.5
Thecc.02G190100 Theobroma cacao HOM05D007008 ORTHO05D008622 6.5e-14 80.9 104 40.4
Thecc.02G024500 Theobroma cacao HOM05D007008 ORTHO05D008622 7.9e-12 73.9 64 50.0
Thecc.01G194900 Theobroma cacao HOM05D007008 ORTHO05D008622 1.5e-10 69.7 64 50.0
Os02g0611450 Oryza sativa ssp. japonica HOM05D007008 ORTHO05D008622 9.1e-08 60.5 54 44.4


User provided reference genes

Program Settings