Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_18510 Physcomitrium patens HOM05D000821 ORTHO05D005255 4.9e-57 224.2 107 100.0
Nn4g23620 Nelumbo nucifera HOM05D000821 ORTHO05D005255 3.1e-11 72.0 64 56.2
unitig_8.g3214 Utricularia gibba HOM05D000821 ORTHO05D005255 2.9e-09 65.5 93 43.0
Ciclev10010716m.g Citrus clementina HOM05D000821 ORTHO05D005255 3.8e-09 65.1 55 56.4
Nitab4.5_0001036g0070 Nicotiana tabacum HOM05D000821 ORTHO05D000931 1.4e-08 63.2 68 44.1
MBI15_g07488_MAGBIO Magnolia biondii HOM05D000821 ORTHO05D005255 1.9e-08 62.8 60 53.3
Nitab4.5_0022449g0010 Nicotiana tabacum HOM05D000821 ORTHO05D000931 2.5e-08 62.4 69 43.5
Solyc02g150147.1 Solanum lycopersicum HOM05D000821 ORTHO05D005255 2.5e-08 62.4 55 54.5
Peaxi162Scf00026g00023 Petunia axillaris HOM05D000821 ORTHO05D000931 5.5e-08 61.2 44 63.6
CDE07G0496 Ceratophyllum demersum HOM05D000821 ORTHO05D005255 7.1e-08 60.8 42 61.9
C09p75720 Brassica napus HOM05D000821 ORTHO05D000931 9.3e-08 60.5 54 53.7
Eucgr.J01448 Eucalyptus grandis HOM05D000821 ORTHO05D005255 9.3e-08 60.5 58 51.7
Lju237C1T16 Lonicera japonica HOM05D000821 ORTHO05D005255 1.2e-07 60.1 60 51.7
Phvul.008G022200 Phaseolus vulgaris HOM05D000821 ORTHO05D005255 1.2e-07 60.1 71 47.9
EL10Ac2g04650 Beta vulgaris HOM05D000821 ORTHO05D005255 1.6e-07 59.7 52 59.6
CiPaw.06G097100 Carya illinoinensis HOM05D000821 ORTHO05D005255 2.1e-07 59.3 47 57.4
Ciclev10013834m.g Citrus clementina HOM05D000821 ORTHO05D005255 2.1e-07 59.3 54 55.6
Lalb_Chr21g0318051 Lupinus albus HOM05D000821 ORTHO05D005255 2.1e-07 59.3 56 48.2
Mapoly0001s0544 Marchantia polymorpha HOM05D000821 ORTHO05D005255 2.1e-07 59.3 41 61.0
Nitab4.5_0001965g0070 Nicotiana tabacum HOM05D000821 ORTHO05D000931 2.1e-07 59.3 61 49.2
Dinv33898 Davidia involucrata HOM05D000821 ORTHO05D005255 2.7e-07 58.9 62 50.0
FAN05G4080 Fragaria x ananassa HOM05D000821 ORTHO05D005255 2.7e-07 58.9 58 51.7
arahy.Tifrunner.gnm1.ann1.0034KJ Arachis hypogaea HOM05D000821 ORTHO05D000931 3.5e-07 58.5 39 64.1
BcaC05g30356 Brassica carinata HOM05D000821 ORTHO05D005255 3.5e-07 58.5 55 54.5
Thhalv10015839m.g Eutrema salsugineum HOM05D000821 ORTHO05D005255 3.5e-07 58.5 47 55.3
Oeu054563.1 Olea europaea HOM05D000821 ORTHO05D000931 3.5e-07 58.5 43 58.1
TAR626G1302 Trochodendron aralioides HOM05D000821 ORTHO05D005255 3.5e-07 58.5 50 58.0
Cpa.g.sc718.1 Carica papaya HOM05D000821 ORTHO05D005255 4.6e-07 58.2 48 54.2
Migut.H00559 Erythranthe guttata HOM05D000821 ORTHO05D005255 4.6e-07 58.2 48 60.4
MD09G1079900 Malus domestica HOM05D000821 ORTHO05D005255 4.6e-07 58.2 49 59.2
Manes.14G114200 Manihot esculenta HOM05D000821 ORTHO05D005255 4.6e-07 58.2 48 54.2
SGA_v2.0_scaffold14G06782 Striga asiatica HOM05D000821 ORTHO05D005255 4.6e-07 58.2 83 43.4
BcaC05g30359 Brassica carinata HOM05D000821 ORTHO05D005255 6.0e-07 57.8 41 63.4
BolC5t35081H Brassica oleracea HOM05D000821 ORTHO05D005255 6.0e-07 57.8 41 63.4
CiPaw.15G163200 Carya illinoinensis HOM05D000821 ORTHO05D005255 6.0e-07 57.8 71 43.7
Ciclev10033607m.g Citrus clementina HOM05D000821 ORTHO05D000931 6.0e-07 57.8 51 54.9
Thecc.04G145800 Theobroma cacao HOM05D000821 ORTHO05D000931 6.0e-07 57.8 48 60.4
vmacro18092 Vaccinium macrocarpon HOM05D000821 ORTHO05D005255 6.0e-07 57.8 72 44.4
HPP92_018539 Vanilla planifolia HOM05D000821 ORTHO05D005255 6.0e-07 57.8 41 63.4
arahy.Tifrunner.gnm1.ann1.5E9M75 Arachis hypogaea HOM05D000821 ORTHO05D005255 7.9e-07 57.4 79 41.8
Cfa010145 Carpinus fangiana HOM05D000821 ORTHO05D005255 7.9e-07 57.4 48 52.1
Migut.L01129 Erythranthe guttata HOM05D000821 ORTHO05D005255 7.9e-07 57.4 41 61.0
FAN09G0163 Fragaria x ananassa HOM05D000821 ORTHO05D005255 7.9e-07 57.4 54 53.7
FAN14G4322 Fragaria x ananassa HOM05D000821 ORTHO05D005255 7.9e-07 57.4 54 53.7
Gohir.A08G035700 Gossypium hirsutum HOM05D000821 ORTHO05D005255 7.9e-07 57.4 69 46.4
Lj4C128G17 Lonicera japonica HOM05D000821 ORTHO05D005255 7.9e-07 57.4 41 63.4
Nitab4.5_0000259g0260 Nicotiana tabacum HOM05D000821 ORTHO05D000931 7.9e-07 57.4 53 54.7
SalBow1G0065 Salvia bowleyana HOM05D000821 ORTHO05D000931 7.9e-07 57.4 62 51.6
SalBow1G6886 Salvia bowleyana HOM05D000821 ORTHO05D000931 7.9e-07 57.4 62 51.6
unitig_22.g6888 Utricularia gibba HOM05D000821 ORTHO05D000931 7.9e-07 57.4 38 65.8
Atru.chr8.734 Acer truncatum HOM05D000821 ORTHO05D005255 1.0e-06 57.0 49 57.1
arahy.Tifrunner.gnm1.ann1.R5A4WZ Arachis hypogaea HOM05D000821 ORTHO05D005255 1.0e-06 57.0 55 52.7
CARHR197360 Cardamine hirsuta HOM05D000821 ORTHO05D005255 1.0e-06 57.0 41 63.4
Haze_19064 Corylus avellana HOM05D000821 ORTHO05D005255 1.0e-06 57.0 55 52.7
Haze_19070 Corylus avellana HOM05D000821 ORTHO05D005255 1.0e-06 57.0 55 52.7
CsaV3_2G007760 Cucumis sativus L. HOM05D000821 ORTHO05D005255 1.0e-06 57.0 29 79.3
FAN02G3078 Fragaria x ananassa HOM05D000821 ORTHO05D005255 1.0e-06 57.0 67 47.8
Gohir.D08G046400 Gossypium hirsutum HOM05D000821 ORTHO05D005255 1.0e-06 57.0 46 56.5
TWI34G0974 Tripterygium wilfordii HOM05D000821 ORTHO05D000931 1.0e-06 57.0 48 52.1
vmacro05595 Vaccinium macrocarpon HOM05D000821 ORTHO05D005255 1.0e-06 57.0 56 53.6
A03p07480 Brassica napus HOM05D000821 ORTHO05D005255 1.3e-06 56.6 49 51.0
Ca_06718_v3 Cicer arietinum L. HOM05D000821 ORTHO05D000931 1.3e-06 56.6 53 52.8
Dinv27410 Davidia involucrata HOM05D000821 ORTHO05D005255 1.3e-06 56.6 64 46.9
Glyma.18G278850 Glycine max HOM05D000821 ORTHO05D005255 1.3e-06 56.6 76 44.7
ATR0580G204 Amborella trichopoda HOM05D000821 ORTHO05D005255 1.8e-06 56.2 41 61.0
Aqoxy7G03268 Aquilegia oxysepala HOM05D000821 ORTHO05D005255 1.8e-06 56.2 48 56.2
CSS0024970 Camellia sinensis var. sinensis HOM05D000821 ORTHO05D005255 1.8e-06 56.2 53 54.7
Glyma.08G255850 Glycine max HOM05D000821 ORTHO05D005255 1.8e-06 56.2 76 44.7
Manes.02G063600 Manihot esculenta HOM05D000821 ORTHO05D005255 1.8e-06 56.2 41 61.0
Nn2g12502 Nelumbo nucifera HOM05D000821 ORTHO05D005255 1.8e-06 56.2 41 61.0
Prupe.3G243800 Prunus persica HOM05D000821 ORTHO05D005255 1.8e-06 56.2 41 61.0
RcHm_v2.0_Chr2g0163951 Rosa chinensis HOM05D000821 ORTHO05D005255 1.8e-06 56.2 50 56.0
GSVIVG01023708001 Vitis vinifera HOM05D000821 ORTHO05D005255 1.8e-06 56.2 55 49.1
Aa31LG11G13650 Aethionema arabicum HOM05D000821 ORTHO05D005255 2.3e-06 55.8 49 53.1
arahy.Tifrunner.gnm1.ann1.8KG9MP Arachis hypogaea HOM05D000821 ORTHO05D005255 2.3e-06 55.8 53 54.7
BcaC01g04446 Brassica carinata HOM05D000821 ORTHO05D005255 2.3e-06 55.8 41 61.0
BcaC04g18922 Brassica carinata HOM05D000821 ORTHO05D005255 2.3e-06 55.8 41 61.0
C03p08680 Brassica napus HOM05D000821 ORTHO05D005255 2.3e-06 55.8 49 51.0
BolC3t13368H Brassica oleracea HOM05D000821 ORTHO05D005255 2.3e-06 55.8 49 51.0
BolC3t16271H Brassica oleracea HOM05D000821 ORTHO05D005255 2.3e-06 55.8 41 61.0
BraA03t10077Z Brassica rapa HOM05D000821 ORTHO05D005255 2.3e-06 55.8 47 53.2
Carub.0006s1414 Capsella rubella HOM05D000821 ORTHO05D005255 2.3e-06 55.8 41 61.0
FvH4_4g28640 Fragaria vesca HOM05D000821 ORTHO05D005255 2.3e-06 55.8 48 56.2
Manes.14G094100 Manihot esculenta HOM05D000821 ORTHO05D005255 2.3e-06 55.8 48 56.2
PSO063G0195 Papaver somniferum HOM05D000821 ORTHO05D000931 2.3e-06 55.8 49 53.1
PSO782G4241 Papaver somniferum HOM05D000821 ORTHO05D000931 2.3e-06 55.8 49 53.1
Peaxi162Scf01056g00028 Petunia axillaris HOM05D000821 ORTHO05D000931 2.3e-06 55.8 48 56.2
RcHm_v2.0_Chr4g0436751 Rosa chinensis HOM05D000821 ORTHO05D005255 2.3e-06 55.8 48 58.3
TAR383G0646 Trochodendron aralioides HOM05D000821 ORTHO05D005255 2.3e-06 55.8 41 61.0
TAR622G0438 Trochodendron aralioides HOM05D000821 ORTHO05D005255 2.3e-06 55.8 40 60.0
Carub.0005s0332 Capsella rubella HOM05D000821 ORTHO05D005255 3.0e-06 55.5 32 68.8
FAN07G0329 Fragaria x ananassa HOM05D000821 ORTHO05D005255 3.0e-06 55.5 47 57.4
Lj1g0021287 Lotus japonicus HOM05D000821 ORTHO05D005255 3.0e-06 55.5 64 46.9
RcHm_v2.0_Chr7g0221071 Rosa chinensis HOM05D000821 ORTHO05D005255 3.0e-06 55.5 48 58.3
CSS0041318 Camellia sinensis var. sinensis HOM05D000821 ORTHO05D005255 3.9e-06 55.1 50 56.0
ClCG05G011880 Citrullus lanatus HOM05D000821 ORTHO05D005255 3.9e-06 55.1 32 71.9
MELO3C023786.2 Cucumis melo HOM05D000821 ORTHO05D005255 3.9e-06 55.1 32 71.9
CsaV3_3G020550 Cucumis sativus L. HOM05D000821 ORTHO05D005255 3.9e-06 55.1 32 71.9
Gohir.A03G108166 Gossypium hirsutum HOM05D000821 ORTHO05D005255 3.9e-06 55.1 41 61.0
Gohir.A13G095100 Gossypium hirsutum HOM05D000821 ORTHO05D005255 3.9e-06 55.1 41 61.0
Gohir.D02G133300 Gossypium hirsutum HOM05D000821 ORTHO05D005255 3.9e-06 55.1 41 61.0
Gohir.D13G089300 Gossypium hirsutum HOM05D000821 ORTHO05D005255 3.9e-06 55.1 41 61.0
Gorai.005G149200 Gossypium raimondii HOM05D000821 ORTHO05D005255 3.9e-06 55.1 41 61.0
MD17G1070400 Malus domestica HOM05D000821 ORTHO05D005255 3.9e-06 55.1 32 71.9
Prupe.1G299600 Prunus persica HOM05D000821 ORTHO05D005255 3.9e-06 55.1 49 55.1
Sed0003314 Sechium edule HOM05D000821 ORTHO05D005255 3.9e-06 55.1 32 71.9
Thecc.02G316800 Theobroma cacao HOM05D000821 ORTHO05D005255 3.9e-06 55.1 41 61.0
vmacro13068 Vaccinium macrocarpon HOM05D000821 ORTHO05D005255 3.9e-06 55.1 56 42.9
Carub.0003s0156 Capsella rubella HOM05D000821 ORTHO05D005255 5.1e-06 54.7 41 58.5
Cc11_g11120 Coffea canephora HOM05D000821 ORTHO05D005255 5.1e-06 54.7 41 58.5
Haze_14083 Corylus avellana HOM05D000821 ORTHO05D005255 5.1e-06 54.7 53 52.8
FAN17G0115 Fragaria x ananassa HOM05D000821 ORTHO05D005255 5.1e-06 54.7 46 56.5
MBI14_g04840_MAGBIO Magnolia biondii HOM05D000821 ORTHO05D005255 5.1e-06 54.7 34 64.7
MBI14_g36371_MAGBIO Magnolia biondii HOM05D000821 ORTHO05D005255 5.1e-06 54.7 34 64.7
Potri.010G133850 Populus trichocarpa HOM05D000821 ORTHO05D005255 5.1e-06 54.7 41 58.5
SalBow8G0588 Salvia bowleyana HOM05D000821 ORTHO05D000931 5.1e-06 54.7 51 52.9
SalBow8G4660 Salvia bowleyana HOM05D000821 ORTHO05D000931 5.1e-06 54.7 51 52.9
BolC1t05902H Brassica oleracea HOM05D000821 ORTHO05D000931 6.7e-06 54.3 38 63.2
BraA10t44380Z Brassica rapa HOM05D000821 ORTHO05D005255 6.7e-06 54.3 32 71.9
CARHR076440 Cardamine hirsuta HOM05D000821 ORTHO05D005255 6.7e-06 54.3 32 71.9
Cc07_g04850 Coffea canephora HOM05D000821 ORTHO05D005255 6.7e-06 54.3 44 61.4
Lalb_Chr04g0255261 Lupinus albus HOM05D000821 ORTHO05D005255 6.7e-06 54.3 32 71.9
Oeu027423.1 Olea europaea HOM05D000821 ORTHO05D005255 6.7e-06 54.3 55 50.9
Potri.018G101400 Populus trichocarpa HOM05D000821 ORTHO05D005255 6.7e-06 54.3 32 75.0
Sabra17G0091400 Salix brachista HOM05D000821 ORTHO05D005255 6.7e-06 54.3 56 50.0
Thecc.09G155600 Theobroma cacao HOM05D000821 ORTHO05D005255 6.7e-06 54.3 36 61.1
vmacro01279 Vaccinium macrocarpon HOM05D000821 ORTHO05D005255 6.7e-06 54.3 32 68.8
Actinidia24035 Actinidia chinensis HOM05D000821 ORTHO05D005255 8.7e-06 53.9 32 71.9
CSS0036603 Camellia sinensis var. sinensis HOM05D000821 ORTHO05D005255 8.7e-06 53.9 32 71.9
CAN.G184.34 Capsicum annuum HOM05D000821 ORTHO05D005255 8.7e-06 53.9 32 71.9
Glyma.01G071400 Glycine max HOM05D000821 ORTHO05D005255 8.7e-06 53.9 32 71.9
Lalb_Chr17g0341711 Lupinus albus HOM05D000821 ORTHO05D005255 8.7e-06 53.9 32 71.9
Manes.01G106700 Manihot esculenta HOM05D000821 ORTHO05D005255 8.7e-06 53.9 41 58.5
Nitab4.5_0013699g0020 Nicotiana tabacum HOM05D000821 ORTHO05D005255 8.7e-06 53.9 32 71.9
Solyc05g010425.1 Solanum lycopersicum HOM05D000821 ORTHO05D005255 8.7e-06 53.9 32 71.9


User provided reference genes

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