Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 0.0e+00 1562.4 841 100.0
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 0.0e+00 1280.4 848 79.8
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 8.2e-200 701.4 881 49.7
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.5e-156 557.0 869 42.1
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 3.9e-149 533.1 809 43.4
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 3.1e-138 496.9 821 40.6
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 2.0e-137 494.2 821 40.2
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 6.4e-136 489.2 829 39.1
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 6.0e-134 482.6 834 38.5
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 1.0e-133 481.9 817 37.9
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.2e-129 468.4 841 37.8
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 4.4e-129 466.5 832 37.1
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 7.1e-127 459.1 833 37.2
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 2.1e-126 457.6 834 38.6
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 2.7e-126 457.2 846 37.1
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 3.5e-126 456.8 838 36.0
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 8.7e-125 452.2 839 36.9
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 1.1e-124 451.8 838 36.4
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 3.3e-124 450.3 861 36.9
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 5.6e-124 449.5 866 36.6
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 9.6e-124 448.7 859 36.4
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 2.8e-123 447.2 851 38.4
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 3.6e-123 446.8 843 36.9
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 6.2e-123 446.0 856 36.8
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 1.8e-122 444.5 835 38.0
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.4e-122 444.1 844 36.6
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 2.4e-122 444.1 833 37.6
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 4.0e-122 443.4 835 37.8
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.5e-121 441.4 837 36.8
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 2.0e-121 441.0 835 36.9
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 2.0e-121 441.0 831 38.1
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 3.4e-121 440.3 831 36.5
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 4.4e-121 439.9 814 37.7
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.9e-120 437.2 818 36.8
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 2.9e-120 437.2 841 36.5
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 3.8e-120 436.8 831 37.5
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 4.9e-120 436.4 816 37.6
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 4.9e-120 436.4 831 37.8
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 6.4e-120 436.0 838 37.4
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.4e-119 434.1 860 36.5
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 3.2e-119 433.7 839 35.5
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 4.2e-119 433.3 831 37.7
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 4.2e-119 433.3 826 37.3
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 9.3e-119 432.2 838 37.2
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 9.3e-119 432.2 852 36.3
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 1.6e-118 431.4 839 35.2
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 1.6e-118 431.4 834 37.4
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 1.6e-118 431.4 831 36.8
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 1.6e-118 431.4 841 37.0
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 2.1e-118 431.0 824 37.1
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 4.6e-118 429.9 832 35.5
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 4.6e-118 429.9 842 37.2
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 7.8e-118 429.1 830 36.3
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 1.3e-117 428.3 874 34.3
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 1.7e-117 427.9 842 36.8
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 3.0e-117 427.2 842 36.7
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 3.0e-117 427.2 843 36.8
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 3.9e-117 426.8 819 36.8
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 6.6e-117 426.0 874 34.2
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 1.1e-116 425.2 829 36.6
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.5e-116 424.9 843 36.1
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.9e-116 424.5 833 35.9
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 1.9e-116 424.5 855 35.0
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 1.9e-116 424.5 816 37.7
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 3.3e-116 423.7 859 35.2
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 4.3e-116 423.3 826 36.8
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 5.6e-116 422.9 826 36.0
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 5.6e-116 422.9 836 36.1
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 7.3e-116 422.5 847 36.2
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 1.6e-115 421.4 854 35.9
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 2.8e-115 420.6 821 36.2
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.1e-114 418.7 829 36.2
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 1.8e-114 417.9 849 35.2
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 1.8e-114 417.9 829 34.9
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 2.4e-114 417.5 678 40.0
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 7.6e-113 412.5 841 35.3
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.3e-112 411.8 828 35.3
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 2.4e-111 407.5 884 35.4
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 7.1e-111 406.0 849 35.6
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 9.3e-111 405.6 851 34.2
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 2.1e-110 404.4 834 35.7
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 2.7e-110 404.1 834 35.0
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 7.9e-110 402.5 829 36.7
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 8.7e-109 399.1 839 35.0
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 1.5e-108 398.3 834 33.5
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 1.5e-108 398.3 861 34.5
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.9e-108 397.9 791 35.8
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 2.5e-108 397.5 964 32.7
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 5.6e-108 396.4 811 34.6
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 7.4e-108 396.0 810 36.0
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 9.6e-108 395.6 835 34.0
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 2.8e-107 394.0 809 35.7
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 4.8e-107 393.3 810 35.6
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 8.1e-107 392.5 824 34.7
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 8.1e-107 392.5 847 34.0
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 1.8e-106 391.3 810 34.9
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 2.4e-106 391.0 865 34.7
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 2.4e-106 391.0 825 34.5
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 1.5e-105 388.3 799 34.5
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 2.6e-105 387.5 824 34.7
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 4.5e-105 386.7 951 32.3
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 9.9e-105 385.6 879 33.3
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 1.3e-104 385.2 721 37.6
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 3.8e-104 383.6 804 34.3
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 4.2e-103 380.2 805 35.4
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 5.5e-103 379.8 862 34.3
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 1.3e-101 375.2 808 34.8
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 1.3e-101 375.2 995 31.4
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 1.8e-101 374.8 806 34.1
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 2.3e-101 374.4 827 35.1
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 6.7e-101 372.9 848 33.8
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 9.6e-100 369.0 829 33.3
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 3.7e-99 367.1 836 33.7
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 4.8e-99 366.7 832 33.5
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 2.4e-98 364.4 830 34.3
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.1e-95 355.5 668 38.3
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 2.5e-95 354.4 846 32.2
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 8.7e-93 345.9 692 36.0
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.9e-92 344.7 576 38.4
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 5.7e-92 343.2 826 32.7
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 7.4e-92 342.8 676 35.2
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 7.4e-92 342.8 895 32.0
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 3.7e-91 340.5 795 32.1
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 1.4e-90 338.6 825 31.4
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 1.2e-89 335.5 905 30.9
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 2.0e-89 334.7 808 33.5
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 7.7e-89 332.8 822 32.1
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.1e-87 328.9 818 32.5
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.9e-87 328.2 611 37.3
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 5.5e-87 326.6 822 32.2
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 2.0e-84 318.2 539 38.2
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 7.4e-84 316.2 870 30.8
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 6.3e-83 313.2 760 34.9
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 8.2e-83 312.8 588 36.7
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 1.4e-82 312.0 648 36.1
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 5.3e-82 310.1 616 35.9
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 7.7e-81 306.2 668 34.9
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 2.9e-80 304.3 806 31.3
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 9.4e-79 299.3 835 30.3
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.7e-78 297.7 637 34.9
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 5.1e-77 293.5 639 34.9
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 6.7e-77 293.1 666 34.1
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 2.2e-75 288.1 635 35.0
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 6.3e-75 286.6 651 35.6
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 3.5e-57 227.6 764 29.3
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 5.7e-52 210.3 810 28.5
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 2.8e-51 208.0 688 30.1
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 8.3e-51 206.5 298 41.6
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 7.2e-47 193.4 450 34.9
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 4.0e-45 187.6 462 32.5
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 1.7e-43 182.2 228 45.6
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.4e-42 179.1 336 37.5
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 4.5e-41 174.1 335 38.8
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 3.3e-39 167.9 366 33.9
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 1.2e-30 139.4 303 34.7
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 3.6e-30 137.9 113 54.9
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 4.0e-29 134.4 249 35.3
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 5.8e-28 130.6 249 34.1
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 2.2e-27 128.6 191 37.7
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 2.3e-24 118.6 218 36.2
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 8.6e-24 116.7 751 23.6
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 3.4e-20 104.8 189 37.0
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 1.9e-18 99.0 152 37.5
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 7.8e-17 93.6 120 42.5
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 6.6e-16 90.5 77 57.1
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 8.1e-14 83.6 75 49.3
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.4e-13 82.8 138 37.7
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.5e-12 79.3 80 47.5
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 7.6e-12 77.0 67 56.7
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 9.9e-12 76.6 82 50.0
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 3.8e-11 74.7 76 47.4
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 9.3e-10 70.1 109 37.6
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 1.2e-09 69.7 98 39.8
CBR_g27932 Chara braunii HOM05D000019 ORTHO05D000002 2.1e-09 68.9 70 48.6
Cre08.g376200 Chlamydomonas reinhardtii HOM05D003622 ORTHO05D004453 7.8e-09 67.0 178 35.4
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 1.0e-08 66.6 98 38.8
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.7e-08 65.9 153 30.7
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 3.9e-08 64.7 95 38.9
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 8.7e-08 63.5 154 35.1
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 1.5e-07 62.8 48 60.4


User provided reference genes

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