Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 3.0e-196 688.3 349 100.0
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 7.6e-91 338.2 215 80.5
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 7.3e-86 321.6 245 69.4
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 1.2e-80 304.3 204 71.6
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 3.2e-73 279.6 211 65.4
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 2.1e-72 276.9 240 60.0
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 4.8e-69 265.8 210 60.5
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 1.4e-68 264.2 203 63.1
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.8e-68 263.8 208 62.0
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 5.3e-68 262.3 211 60.2
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 5.3e-68 262.3 208 61.5
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 3.4e-67 259.6 207 61.8
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 4.5e-67 259.2 210 60.5
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 9.9e-67 258.1 211 60.7
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 9.9e-67 258.1 193 64.2
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 1.3e-66 257.7 241 56.0
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 1.3e-66 257.7 211 60.2
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 1.3e-66 257.7 204 62.3
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 2.2e-66 256.9 211 59.7
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 3.8e-66 256.1 210 59.0
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 4.9e-66 255.8 237 54.9
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 6.4e-66 255.4 224 59.4
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 1.4e-65 254.2 210 58.6
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 2.4e-65 253.4 211 57.3
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 5.5e-65 252.3 234 53.8
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 7.1e-65 251.9 221 57.5
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 9.3e-65 251.5 204 61.3
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 9.3e-65 251.5 211 59.2
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.2e-64 251.1 255 51.8
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 1.2e-64 251.1 211 59.2
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 2.1e-64 250.4 221 56.1
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 4.6e-64 249.2 209 59.3
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 4.6e-64 249.2 211 58.8
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 7.9e-64 248.4 236 54.7
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 7.9e-64 248.4 222 55.0
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 7.9e-64 248.4 222 55.9
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 1.0e-63 248.1 235 55.3
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 1.0e-63 248.1 218 58.3
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 1.8e-63 247.3 233 54.9
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.8e-63 247.3 211 57.8
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 2.3e-63 246.9 211 57.8
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 3.9e-63 246.1 211 57.3
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 3.9e-63 246.1 211 57.3
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 8.7e-63 245.0 211 58.3
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.1e-62 244.6 211 58.3
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.1e-62 244.6 218 56.4
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.1e-62 244.6 211 57.8
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 1.5e-62 244.2 211 57.8
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 1.9e-62 243.8 211 56.9
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 1.9e-62 243.8 211 56.4
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 2.5e-62 243.4 211 56.9
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 2.5e-62 243.4 211 56.4
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 3.3e-62 243.0 271 48.0
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 3.3e-62 243.0 210 56.2
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 5.6e-62 242.3 235 53.2
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 1.3e-61 241.1 222 55.0
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 1.6e-61 240.7 249 50.6
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 2.1e-61 240.4 211 56.4
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 2.8e-61 240.0 220 55.5
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 8.2e-61 238.4 173 66.5
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 1.4e-60 237.7 211 55.5
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 1.8e-60 237.3 211 55.5
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 3.1e-60 236.5 245 50.6
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 5.3e-60 235.7 221 53.8
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 2.0e-59 233.8 211 56.9
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 2.0e-59 233.8 211 56.9
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 8.4e-58 228.4 189 60.8
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 8.4e-58 228.4 217 55.8
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 3.2e-57 226.5 211 54.5
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 4.2e-57 226.1 211 55.0
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 1.2e-56 224.6 233 49.8
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 2.1e-56 223.8 211 53.6
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 2.7e-56 223.4 196 58.2
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 3.5e-56 223.0 196 57.7
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 1.3e-55 221.1 216 54.2
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 1.3e-55 221.1 222 51.4
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 1.8e-55 220.7 254 49.6
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 2.2e-53 213.8 143 74.8
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.2e-53 213.8 211 53.1
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 6.3e-53 212.2 211 52.1
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.4e-52 211.1 257 47.5
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 1.4e-52 211.1 252 47.2
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 9.0e-52 208.4 211 52.1
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 3.4e-51 206.5 263 45.2
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 4.5e-51 206.1 171 60.8
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.3e-50 204.5 263 44.9
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 2.2e-50 203.8 239 48.1
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 3.8e-50 203.0 210 52.4
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 1.1e-49 201.4 163 61.3
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 2.5e-49 200.3 286 42.7
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 7.2e-49 198.7 226 49.6
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 1.2e-48 198.0 237 48.1
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 1.6e-48 197.6 164 60.4
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 2.7e-48 196.8 186 56.5
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 5.1e-47 192.6 209 49.3
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 2.5e-46 190.3 136 69.1
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 1.4e-44 184.5 169 54.4
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 4.1e-44 183.0 184 51.1
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 6.9e-44 182.2 134 67.9
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 6.9e-44 182.2 255 43.5
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 1.9e-41 174.1 143 60.1
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 4.2e-41 172.9 138 63.0
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 9.7e-38 161.8 171 53.2
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 4.8e-37 159.5 171 52.6
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 7.7e-35 152.1 230 41.7
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 4.2e-33 146.4 127 58.3
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 3.0e-31 140.2 100 70.0
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 6.7e-31 139.0 130 53.8
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 1.1e-28 131.7 100 65.0
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 7.0e-28 129.0 188 40.4
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 2.9e-26 123.6 178 38.2
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 5.0e-26 122.9 244 37.3
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 6.1e-24 115.9 116 46.6
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 8.0e-24 115.5 192 37.5
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 3.0e-23 113.6 112 53.6
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 1.2e-22 111.7 182 41.2
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 1.0e-18 98.6 84 59.5
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 2.0e-11 74.3 100 46.0
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 2.9e-10 70.5 69 52.2
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 1.9e-09 67.8 86 47.7
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 8.0e-08 62.4 53 56.6


User provided reference genes

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