Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 6.4e-182 640.6 314 100.0
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 9.9e-167 590.1 299 95.0
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 3.1e-128 462.2 313 70.0
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 8.0e-124 447.6 313 68.7
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 9.4e-109 397.5 303 62.7
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 1.2e-108 397.1 305 62.3
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 1.6e-108 396.7 298 63.1
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 2.1e-108 396.4 305 62.0
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 2.7e-108 396.0 297 63.3
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 6.1e-108 394.8 305 62.0
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 1.0e-107 394.0 297 62.6
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 3.0e-107 392.5 297 62.6
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 2.0e-106 389.8 310 60.3
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 4.4e-106 388.7 306 59.8
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 4.4e-106 388.7 306 59.8
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 9.8e-106 387.5 306 59.8
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 1.3e-105 387.1 299 62.2
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 2.2e-105 386.3 306 59.5
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 3.7e-105 385.6 298 61.7
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 6.3e-105 384.8 306 59.5
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 1.8e-104 383.3 306 59.2
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 9.1e-104 380.9 283 64.0
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 9.1e-104 380.9 309 58.6
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 2.0e-103 379.8 308 58.4
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 2.7e-103 379.4 307 59.0
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 2.7e-103 379.4 299 60.2
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 4.5e-103 378.6 305 59.0
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 1.0e-102 377.5 309 58.9
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 1.7e-102 376.7 297 60.6
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 1.7e-102 376.7 299 59.5
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 1.7e-102 376.7 311 59.5
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 2.9e-102 375.9 309 58.6
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 1.5e-101 373.6 307 59.0
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 1.5e-101 373.6 294 60.9
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 1.9e-101 373.2 311 57.2
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 1.9e-101 373.2 294 60.9
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 2.5e-101 372.9 315 57.1
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 3.3e-101 372.5 318 56.6
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 4.3e-101 372.1 283 64.7
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 5.6e-101 371.7 309 59.5
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 9.5e-101 370.9 308 57.1
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 1.2e-100 370.5 291 60.5
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 6.1e-100 368.2 295 60.3
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 8.0e-100 367.9 291 60.1
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 8.0e-100 367.9 316 56.6
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 1.4e-99 367.1 317 56.2
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 1.4e-99 367.1 318 56.0
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 3.0e-99 365.9 318 56.0
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 3.0e-99 365.9 318 56.0
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 3.0e-99 365.9 318 56.0
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 4.0e-99 365.5 293 61.1
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 5.2e-99 365.2 279 62.4
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 8.9e-99 364.4 315 57.5
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 1.2e-98 364.0 295 58.3
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 1.2e-98 364.0 295 58.3
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 1.5e-98 363.6 314 57.6
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 2.0e-98 363.2 308 58.4
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 2.0e-98 363.2 308 58.4
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 4.4e-98 362.1 307 57.3
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 7.5e-98 361.3 320 55.9
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 9.8e-98 360.9 303 59.1
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 2.2e-97 359.8 298 56.7
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 2.9e-97 359.4 294 58.8
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 6.4e-97 358.2 300 57.3
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 1.1e-96 357.5 302 57.9
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 1.4e-96 357.1 313 56.9
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 1.4e-96 357.1 320 54.1
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 1.8e-96 356.7 272 62.5
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 3.2e-96 355.9 297 58.9
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 4.1e-96 355.5 267 62.9
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 7.0e-96 354.8 265 64.2
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 1.9e-93 346.7 298 57.0
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 1.2e-90 337.4 308 53.9
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 2.0e-90 336.7 374 48.1
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 2.6e-90 336.3 301 56.8
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 8.3e-89 331.3 266 59.8
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 1.4e-88 330.5 313 54.0
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 5.4e-88 328.6 304 56.2
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 1.2e-87 327.4 255 60.8
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 1.0e-86 324.3 298 54.7
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 1.7e-86 323.6 263 58.9
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 1.2e-84 317.4 296 55.4
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.2e-84 317.4 243 59.7
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 3.6e-84 315.8 276 57.2
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 6.2e-84 315.1 245 62.0
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 2.3e-83 313.2 293 55.3
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 4.4e-82 308.9 270 55.2
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 9.8e-82 307.8 388 43.8
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 2.4e-80 303.1 336 49.4
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 3.2e-80 302.8 244 59.4
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 3.5e-79 299.3 285 53.3
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 3.9e-78 295.8 220 60.9
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 5.1e-78 295.4 302 50.0
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 2.1e-76 290.0 258 55.8
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 5.2e-75 285.4 315 48.3
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 3.9e-70 269.2 196 63.3
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 6.6e-70 268.5 304 47.0
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 4.0e-67 259.2 268 51.1
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 1.2e-63 247.7 263 49.8
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 7.8e-63 245.0 193 59.1
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 3.5e-55 219.5 625 28.3
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 3.5e-55 219.5 285 41.8
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 2.3e-54 216.9 317 41.6
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 2.1e-52 210.3 230 48.3
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 9.0e-51 204.9 229 49.3
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 4.3e-45 186.0 229 46.3
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 7.4e-45 185.3 151 57.6
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 4.0e-43 179.5 157 56.7
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 9.0e-43 178.3 157 54.8
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 4.5e-42 176.0 235 43.4
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.0e-38 164.9 277 37.5
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 6.7e-38 162.2 305 36.4
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 4.8e-36 156.0 194 42.8
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 2.4e-35 153.7 145 53.1
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.2e-31 141.4 273 31.5
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 1.3e-30 137.9 129 54.3
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 4.8e-28 129.4 112 54.5
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 6.9e-27 125.6 87 64.4
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 3.4e-26 123.2 354 29.7
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 6.5e-25 119.0 90 63.3
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 1.5e-18 97.8 76 59.2
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 1.0e-06 58.5 47 55.3
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 2.3e-06 57.4 60 41.7


User provided reference genes

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