Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_14930 Physcomitrium patens HOM05D021719 ORTHO05D000099 1.9e-89 332.4 159 100.0
Pp3c6_6545 Physcomitrium patens HOM05D021719 ORTHO05D000099 1.2e-38 163.7 159 50.3
Pp3c5_22560 Physcomitrium patens HOM05D021719 ORTHO05D000099 3.7e-37 158.7 159 50.3
Pp3c6_6560 Physcomitrium patens HOM05D021719 ORTHO05D000099 5.4e-36 154.8 159 48.4
Pp3c6_6610 Physcomitrium patens HOM05D021719 ORTHO05D000099 5.4e-36 154.8 159 48.4
Pp3c14_24140 Physcomitrium patens HOM05D021719 ORTHO05D000099 9.9e-22 107.5 129 45.0
Pp3c6_27280 Physcomitrium patens HOM05D000180 ORTHO05D000099 6.4e-21 104.8 156 38.5
Pp3c13_12170 Physcomitrium patens HOM05D000180 ORTHO05D000099 7.1e-20 101.3 157 39.5
Pp3c14_380 Physcomitrium patens HOM05D000180 ORTHO05D000099 2.8e-16 89.4 118 39.0
Zm00001eb067090 Zea mays HOM05D000180 ORTHO05D000099 6.0e-11 71.6 151 31.1
SEGI_32439 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 1.5e-09 67.0 151 30.5
Os03g0400200 Oryza sativa ssp. japonica HOM05D000180 ORTHO05D000099 9.6e-09 64.3 155 29.7
Nitab4.5_0000321g0020 Nicotiana tabacum HOM05D000180 ORTHO05D000099 2.8e-08 62.8 152 36.2
Nitab4.5_0014533g0010 Nicotiana tabacum HOM05D000180 ORTHO05D000099 8.1e-08 61.2 131 37.4
CDE07G1183 Ceratophyllum demersum HOM05D000180 ORTHO05D000099 1.4e-07 60.5 132 34.8
Lj9C645T25 Lonicera japonica HOM05D000180 ORTHO05D000099 1.4e-07 60.5 138 37.0
Os04g0666800 Oryza sativa ssp. japonica HOM05D000180 ORTHO05D000099 1.4e-07 60.5 157 28.0
Mapoly0078s0052 Marchantia polymorpha HOM05D029457 ORTHO05D048774 4.0e-07 58.9 125 32.0
Zm00001eb124210 Zea mays HOM05D000180 ORTHO05D000099 5.3e-07 58.5 139 30.2
CDE06G0779 Ceratophyllum demersum HOM05D000180 ORTHO05D000099 6.9e-07 58.2 149 33.6
Nitab4.5_0006639g0100 Nicotiana tabacum HOM05D000180 ORTHO05D000099 6.9e-07 58.2 147 35.4
Peaxi162Scf00769g00038 Petunia axillaris HOM05D000180 ORTHO05D000099 6.9e-07 58.2 133 36.8
Aa31LG7G6900 Aethionema arabicum HOM05D000180 ORTHO05D000099 9.0e-07 57.8 156 32.1
MD07G1030400 Malus domestica HOM05D000180 ORTHO05D000099 1.2e-06 57.4 137 36.5
Lj3g0023605 Lotus japonicus HOM05D000180 ORTHO05D000099 1.5e-06 57.0 131 34.4
AUR62015322 Chenopodium quinoa HOM05D000180 ORTHO05D000099 2.0e-06 56.6 132 34.8
CDE05G2393 Ceratophyllum demersum HOM05D000180 ORTHO05D000099 3.4e-06 55.8 149 34.2
Eucgr.C02472 Eucalyptus grandis HOM05D000180 ORTHO05D000099 3.4e-06 55.8 133 33.8
Eucgr.L00694 Eucalyptus grandis HOM05D000180 ORTHO05D000099 3.4e-06 55.8 133 33.8
Zm00001eb433080 Zea mays HOM05D000180 ORTHO05D000099 3.4e-06 55.8 163 26.4
CDE06G2414 Ceratophyllum demersum HOM05D000180 ORTHO05D000099 4.5e-06 55.5 132 34.1
MBI09_g25279_MAGBIO Magnolia biondii HOM05D000180 ORTHO05D000099 4.5e-06 55.5 132 31.1
Os10g0398100 Oryza sativa ssp. japonica HOM05D000180 ORTHO05D000099 4.5e-06 55.5 157 28.7
Hma1.2p1_0645F.1_g194980 Hydrangea macrophylla HOM05D000180 ORTHO05D000099 5.8e-06 55.1 133 33.1
Sabra09G0101200 Salix brachista HOM05D000180 ORTHO05D000099 5.8e-06 55.1 139 34.5
AagrBONN_evm.TU.Sc2ySwM_340.457 Anthoceros agrestis HOM05D000180 ORTHO05D000099 7.6e-06 54.7 124 30.6
CSS0008829 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 7.6e-06 54.7 131 33.6
CSS0046463 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 7.6e-06 54.7 131 33.6
CANSAT64G1873 Cannabis sativa HOM05D000180 ORTHO05D000099 7.6e-06 54.7 132 32.6
FvH4_7g31480 Fragaria vesca HOM05D000180 ORTHO05D000099 7.6e-06 54.7 137 32.1
FAN06G0338 Fragaria x ananassa HOM05D000180 ORTHO05D000099 7.6e-06 54.7 137 32.1
FAN06G1956 Fragaria x ananassa HOM05D000180 ORTHO05D000099 7.6e-06 54.7 137 32.1
Hma1.2p1_0116F.1_g056130 Hydrangea macrophylla HOM05D000180 ORTHO05D000099 7.6e-06 54.7 133 33.1
Hma1.2p1_2200F.1_g317000 Hydrangea macrophylla HOM05D000180 ORTHO05D000099 7.6e-06 54.7 133 33.1
Nn7g35944 Nelumbo nucifera HOM05D000180 ORTHO05D000099 7.6e-06 54.7 132 32.6
ATR0081G021 Amborella trichopoda HOM05D000180 ORTHO05D000099 9.9e-06 54.3 136 31.6
CDE06G2788 Ceratophyllum demersum HOM05D000180 ORTHO05D000099 9.9e-06 54.3 132 34.1
COL.COLO4_10458 Corchorus olitorius HOM05D000180 ORTHO05D000099 9.9e-06 54.3 132 32.6
Eucgr.A02479 Eucalyptus grandis HOM05D000180 ORTHO05D000099 9.9e-06 54.3 132 33.3
Mapoly0078s0058 Marchantia polymorpha HOM05D014630 ORTHO05D000099 9.9e-06 54.3 147 29.9


User provided reference genes

Program Settings