Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 5.9e-106 387.5 190 100.0
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 2.5e-27 126.3 89 64.0
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 1.8e-25 120.2 86 61.6
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 8.7e-25 117.9 86 59.3
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 8.7e-25 117.9 86 59.3
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 8.7e-25 117.9 86 59.3
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 8.7e-25 117.9 86 58.1
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 1.5e-24 117.1 86 58.1
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 1.5e-24 117.1 86 57.0
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 1.9e-24 116.7 86 58.1
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 2.5e-24 116.3 128 49.2
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 3.3e-24 115.9 80 61.2
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 3.3e-24 115.9 80 61.2
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 4.3e-24 115.5 76 64.5
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 4.3e-24 115.5 76 65.8
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 7.4e-24 114.8 101 54.5
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 1.6e-23 113.6 97 53.6
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 1.6e-23 113.6 81 60.5
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 1.6e-23 113.6 86 53.5
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 2.2e-23 113.2 86 55.8
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.2e-23 113.2 86 55.8
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.2e-23 113.2 86 55.8
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.8e-23 112.8 102 52.0
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.8e-23 112.8 86 55.8
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 2.8e-23 112.8 86 58.1
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 4.8e-23 112.1 86 58.1
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 4.8e-23 112.1 86 58.1
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 4.8e-23 112.1 76 61.8
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 8.2e-23 111.3 79 59.5
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 1.1e-22 110.9 80 60.0
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 1.1e-22 110.9 103 48.5
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 1.1e-22 110.9 79 59.5
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 1.4e-22 110.5 82 57.3
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 1.8e-22 110.2 85 57.6
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 2.4e-22 109.8 86 55.8
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 4.1e-22 109.0 86 57.0
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 5.3e-22 108.6 104 49.0
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 5.3e-22 108.6 105 48.6
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 5.3e-22 108.6 86 53.5
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 5.3e-22 108.6 86 54.7
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 6.9e-22 108.2 78 56.4
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 9.0e-22 107.8 86 54.7
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 9.0e-22 107.8 78 57.7
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 9.0e-22 107.8 90 58.9
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 9.0e-22 107.8 86 53.5
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 1.2e-21 107.5 94 53.2
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 1.2e-21 107.5 86 53.5
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 1.5e-21 107.1 105 47.6
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 1.5e-21 107.1 80 57.5
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 1.5e-21 107.1 86 54.7
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 1.5e-21 107.1 86 54.7
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 2.0e-21 106.7 89 56.2
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 2.0e-21 106.7 86 54.7
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 2.0e-21 106.7 86 53.5
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 2.0e-21 106.7 86 53.5
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 2.0e-21 106.7 86 53.5
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 2.0e-21 106.7 86 53.5
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 2.0e-21 106.7 86 53.5
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 2.0e-21 106.7 86 53.5
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 2.0e-21 106.7 93 57.0
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 2.0e-21 106.7 78 60.3
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 2.6e-21 106.3 75 57.3
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 2.6e-21 106.3 86 52.3
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 3.4e-21 105.9 92 52.2
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 3.4e-21 105.9 86 52.3
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 3.4e-21 105.9 86 52.3
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 3.4e-21 105.9 78 55.1
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 4.5e-21 105.5 113 46.0
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 4.5e-21 105.5 78 56.4
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 4.5e-21 105.5 77 59.7
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 4.5e-21 105.5 78 55.1
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 4.5e-21 105.5 78 55.1
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 4.5e-21 105.5 78 56.4
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 5.9e-21 105.1 76 59.2
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 5.9e-21 105.1 78 55.1
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 5.9e-21 105.1 75 60.0
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 7.7e-21 104.8 103 44.7
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 1.0e-20 104.4 86 52.3
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 1.0e-20 104.4 80 56.2
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 1.3e-20 104.0 103 48.5
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 1.3e-20 104.0 81 56.8
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 2.2e-20 103.2 86 51.2
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 2.9e-20 102.8 77 58.4
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 5.0e-20 102.1 86 52.3
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 6.5e-20 101.7 80 53.8
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 8.5e-20 101.3 132 42.4
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 1.4e-19 100.5 78 55.1
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 3.2e-19 99.4 78 55.1
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 3.2e-19 99.4 84 52.4
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 3.2e-19 99.4 78 51.3
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 3.2e-19 99.4 78 55.1
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 4.2e-19 99.0 101 46.5
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 5.5e-19 98.6 79 54.4
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 5.7e-16 88.6 84 46.4
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 1.3e-12 77.4 65 50.8
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 1.7e-12 77.0 86 43.0
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 1.7e-12 77.0 86 43.0
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 2.2e-12 76.6 57 54.4
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 1.9e-11 73.6 53 56.6
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 4.4e-08 62.4 63 49.2
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 1.4e-06 57.4 39 59.0


User provided reference genes

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